RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 Q6ZRU5 148 aa12.22□□□□□ -0.45
SNED1-204ENST00000401884 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
SNED1-204ENST00000401884 FAM19A3Q7Z5A8 133 aa12.21□□□□□ -0.45
SNED1-204ENST00000401884 C2orf48Q96LS8 159 aa12.19□□□□□ -0.46
SNED1-204ENST00000401884 Q8N3U1 123 aa12.19□□□□□ -0.46
SNED1-204ENST00000401884 COL6A3P12111 3177 aa12.19□□□□□ -0.46
SNED1-204ENST00000401884 C10orf25Q5T742 122 aa12.18□□□□□ -0.46
SNED1-204ENST00000401884 IL17DQ8TAD2 202 aa12.18□□□□□ -0.46
SNED1-204ENST00000401884 TRAV7A0A075B6U4 112 aa12.16□□□□□ -0.46
SNED1-204ENST00000401884 NDUFC1O43677 76 aa12.16□□□□□ -0.46
SNED1-204ENST00000401884 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
SNED1-204ENST00000401884 Q6ZVQ6 151 aa12.15□□□□□ -0.46
SNED1-204ENST00000401884 KALRNO60229 2985 aa12.15□□□□□ -0.46
SNED1-204ENST00000401884 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
SNED1-204ENST00000401884 C5orf47Q569G3 176 aa12.14□□□□□ -0.47
SNED1-204ENST00000401884 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
SNED1-204ENST00000401884 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
SNED1-204ENST00000401884 ATMQ13315 3056 aa12.13□□□□□ -0.47
SNED1-204ENST00000401884 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
SNED1-204ENST00000401884 M0R2N4 97 aa12.12□□□□□ -0.47
SNED1-204ENST00000401884 ESRGQ1W209 222 aa12.11□□□□□ -0.47
SNED1-204ENST00000401884 MPLKIPQ8TAP9 179 aa12.11□□□□□ -0.47
SNED1-204ENST00000401884 GIG44P09565 113 aaPredicted RBP12.11□□□□□ -0.47
SNED1-204ENST00000401884 REV3LO60673 3130 aa12.1□□□□□ -0.47
SNED1-204ENST00000401884 LINC01547P58512 204 aaPredicted RBP12.09□□□□□ -0.47
SNED1-204ENST00000401884 Q8NAQ8 132 aa12.09□□□□□ -0.47
SNED1-204ENST00000401884 F8WDY8 70 aa12.09□□□□□ -0.47
SNED1-204ENST00000401884 C19orf73Q9NVV2 129 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 FLNCQ14315 2725 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 DMXL2Q8TDJ6 3036 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 REG3GQ6UW15 175 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 BRK1Q8WUW1 75 aa12.07□□□□□ -0.48
SNED1-204ENST00000401884 IGKV4-1P06312 121 aa12.06□□□□□ -0.48
SNED1-204ENST00000401884 MRPL55Q7Z7F7 128 aaKnown RBP12.06□□□□□ -0.48
SNED1-204ENST00000401884 PLAC8L1A1L4L8 177 aa12.05□□□□□ -0.48
SNED1-204ENST00000401884 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
SNED1-204ENST00000401884 IGSF10Q6WRI0 2623 aa12.05□□□□□ -0.48
SNED1-204ENST00000401884 PRR4Q16378 134 aa12.05□□□□□ -0.48
SNED1-204ENST00000401884 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
SNED1-204ENST00000401884 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
SNED1-204ENST00000401884 SPATA3Q8NHX4 192 aa12.04□□□□□ -0.48
SNED1-204ENST00000401884 ATP5EP56381 51 aaPredicted RBP12.03□□□□□ -0.48
SNED1-204ENST00000401884 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
SNED1-204ENST00000401884 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
SNED1-204ENST00000401884 TEX15Q9BXT5 2789 aa12.02□□□□□ -0.49
SNED1-204ENST00000401884 PRYO14603 147 aa12.02□□□□□ -0.49
SNED1-204ENST00000401884 CFAP47Q6ZTR5 3102 aa12.02□□□□□ -0.49
SNED1-204ENST00000401884 H3BNG1 76 aa12.01□□□□□ -0.49
SNED1-204ENST00000401884 COL12A1Q99715 3063 aa12□□□□□ -0.49
SNED1-204ENST00000401884 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
SNED1-204ENST00000401884 C22orf24Q9Y442 160 aa12□□□□□ -0.49
SNED1-204ENST00000401884 Q8N9L7 120 aa12□□□□□ -0.49
SNED1-204ENST00000401884 IGLV9-49A0A0B4J1Y8 123 aa11.99□□□□□ -0.49
SNED1-204ENST00000401884 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
SNED1-204ENST00000401884 CHKB-CPT1BH3BT56 60 aa11.99□□□□□ -0.49
SNED1-204ENST00000401884 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
SNED1-204ENST00000401884 SPINK6Q6UWN8 80 aa11.98□□□□□ -0.49
SNED1-204ENST00000401884 A0A087WSZ3 146 aa11.98□□□□□ -0.49
SNED1-204ENST00000401884 CXCL6P80162 114 aa11.98□□□□□ -0.49
SNED1-204ENST00000401884 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
SNED1-204ENST00000401884 PRLHP81277 87 aa11.96□□□□□ -0.49
SNED1-204ENST00000401884 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.49
SNED1-204ENST00000401884 Q6ZQT0 140 aa11.96□□□□□ -0.5
SNED1-204ENST00000401884 KRTAP1-3Q8IUG1 177 aa11.96□□□□□ -0.5
SNED1-204ENST00000401884 TACC2O95359 2948 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
SNED1-204ENST00000401884 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 SMIM26A0A096LP01 95 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 CRYGAP11844 174 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 TMEM254Q8TBM7 123 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
SNED1-204ENST00000401884 Q9BRP9 147 aa11.94□□□□□ -0.5
SNED1-204ENST00000401884 NBEAL2Q6ZNJ1 2754 aa11.93□□□□□ -0.5
SNED1-204ENST00000401884 DEFB116Q30KQ4 102 aa11.93□□□□□ -0.5
SNED1-204ENST00000401884 KRTAP24-1Q3LI83 254 aa11.93□□□□□ -0.5
SNED1-204ENST00000401884 SERP1Q9Y6X1 66 aa11.93□□□□□ -0.5
SNED1-204ENST00000401884 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
SNED1-204ENST00000401884 UBR5O95071 2799 aaPredicted RBP11.93□□□□□ -0.5
SNED1-204ENST00000401884 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
SNED1-204ENST00000401884 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
SNED1-204ENST00000401884 LRBAP50851 2863 aa11.92□□□□□ -0.5
SNED1-204ENST00000401884 TRBV7-6A0A0J9YX20 115 aa11.92□□□□□ -0.5
SNED1-204ENST00000401884 LINC00208Q96KT6 92 aa11.92□□□□□ -0.5
SNED1-204ENST00000401884 NOTCH1P46531 2555 aa11.91□□□□□ -0.5
SNED1-204ENST00000401884 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
SNED1-204ENST00000401884 UNC79Q9P2D8 2635 aa11.91□□□□□ -0.5
SNED1-204ENST00000401884 NUPR2A6NF83 97 aa11.9□□□□□ -0.5
SNED1-204ENST00000401884 IGLV6-57P01721 117 aa11.9□□□□□ -0.5
SNED1-204ENST00000401884 ITPR1Q14643 2758 aa11.89□□□□□ -0.51
SNED1-204ENST00000401884 LOC110117498A0A087WWA1 95 aa11.89□□□□□ -0.51
SNED1-204ENST00000401884 KRTAP10-3P60369 221 aa11.89□□□□□ -0.51
SNED1-204ENST00000401884 VPREB1P12018 145 aa11.89□□□□□ -0.51
SNED1-204ENST00000401884 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
SNED1-204ENST00000401884 LY6G6CO95867 125 aa11.87□□□□□ -0.51
SNED1-204ENST00000401884 Q6ZRP5 223 aa11.87□□□□□ -0.51
SNED1-204ENST00000401884 PRR34Q9NV39 138 aa11.87□□□□□ -0.51
SNED1-204ENST00000401884 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
SNED1-204ENST00000401884 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
SNED1-204ENST00000401884 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms