RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 WWC2-AS2Q96NR7 200 aa7.79□□□□□ -1.16
SKA3-203ENST00000400018 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
SKA3-203ENST00000400018 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
SKA3-203ENST00000400018 DNAH10OSP0CZ25 163 aa7.78□□□□□ -1.16
SKA3-203ENST00000400018 RPS28P62857 69 aaKnown RBP7.78□□□□□ -1.16
SKA3-203ENST00000400018 OXTP01178 125 aa7.78□□□□□ -1.16
SKA3-203ENST00000400018 MALP21145 153 aa7.78□□□□□ -1.16
SKA3-203ENST00000400018 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
SKA3-203ENST00000400018 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
SKA3-203ENST00000400018 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
SKA3-203ENST00000400018 TIRAPP58753 221 aa7.77□□□□□ -1.17
SKA3-203ENST00000400018 PFN2P35080 140 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 COX7A2LO14548 114 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 TRIAP1O43715 76 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 CD164L2Q6UWJ8 174 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 C1orf43Q9BWL3 253 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
SKA3-203ENST00000400018 COX7CP15954 63 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 DNAH6Q9C0G6 4158 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 A0A087WZ39 114 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
SKA3-203ENST00000400018 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.74□□□□□ -1.17
SKA3-203ENST00000400018 LEPROTO15243 131 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 Q5XG85 94 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 C6orf226Q5I0X4 101 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
SKA3-203ENST00000400018 MUSTN1Q8IVN3 82 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 IBA57-AS1B1ANH7 110 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 CRYGAP11844 174 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
SKA3-203ENST00000400018 IGLV5-39A0A0G2JS06 123 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 TRACP01848 142 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 SLPIP03973 132 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 MIAQ16674 131 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 KIAA0087Q14695 138 aa7.72□□□□□ -1.17
SKA3-203ENST00000400018 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.17
SKA3-203ENST00000400018 PRSS2P07478 247 aa7.71□□□□□ -1.18
SKA3-203ENST00000400018 FAM19A3Q7Z5A8 133 aa7.71□□□□□ -1.18
SKA3-203ENST00000400018 RYR3Q15413 4870 aa7.71□□□□□ -1.18
SKA3-203ENST00000400018 TRBV30A0A0K0K1B3 111 aa7.71□□□□□ -1.18
SKA3-203ENST00000400018 H3BT86 120 aa7.71□□□□□ -1.18
SKA3-203ENST00000400018 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
SKA3-203ENST00000400018 PSCAO43653 123 aa7.7□□□□□ -1.18
SKA3-203ENST00000400018 F8WDY8 70 aa7.69□□□□□ -1.18
SKA3-203ENST00000400018 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
SKA3-203ENST00000400018 LINC00476Q8WZB0 136 aa7.69□□□□□ -1.18
SKA3-203ENST00000400018 Q6ZRU5 148 aa7.68□□□□□ -1.18
SKA3-203ENST00000400018 LITAFQ99732 161 aa7.68□□□□□ -1.18
SKA3-203ENST00000400018 PKHD1P08F94 4074 aa7.68□□□□□ -1.18
SKA3-203ENST00000400018 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
SKA3-203ENST00000400018 SOSTDC1Q6X4U4 206 aa7.67□□□□□ -1.18
SKA3-203ENST00000400018 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
SKA3-203ENST00000400018 PKIGQ9Y2B9 76 aa7.67□□□□□ -1.18
SKA3-203ENST00000400018 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
SKA3-203ENST00000400018 LINC00158P58513 81 aa7.67□□□□□ -1.18
SKA3-203ENST00000400018 TMEM258P61165 79 aa7.67□□□□□ -1.18
SKA3-203ENST00000400018 ZNF561-AS1K7EIQ3 104 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 Q8NDZ9 215 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 RYR2Q92736 4967 aa7.66□□□□□ -1.18
SKA3-203ENST00000400018 NDUFA1O15239 70 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 ACYP1P07311 99 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 COX6CP09669 75 aa7.65□□□□□ -1.18
SKA3-203ENST00000400018 LST1O00453 97 aa7.65□□□□□ -1.19
SKA3-203ENST00000400018 DNAH11Q96DT5 4516 aa7.65□□□□□ -1.19
SKA3-203ENST00000400018 ALMS1Q8TCU4 4167 aa7.64□□□□□ -1.19
SKA3-203ENST00000400018 ATOX1O00244 68 aa7.64□□□□□ -1.19
SKA3-203ENST00000400018 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
SKA3-203ENST00000400018 SPANXDQ9BXN6 97 aa7.64□□□□□ -1.19
SKA3-203ENST00000400018 Q8IZM0 81 aa7.63□□□□□ -1.19
SKA3-203ENST00000400018 PRO0628Q9UI54 55 aa7.63□□□□□ -1.19
SKA3-203ENST00000400018 DNAH5Q8TE73 4624 aa7.62□□□□□ -1.19
SKA3-203ENST00000400018 CXCL5P42830 114 aa7.62□□□□□ -1.19
SKA3-203ENST00000400018 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
SKA3-203ENST00000400018 HAMPP81172 84 aa7.62□□□□□ -1.19
SKA3-203ENST00000400018 TNP2Q05952 138 aa7.62□□□□□ -1.19
SKA3-203ENST00000400018 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms