RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 SUPT6HQ7KZ85 1726 aaKnown RBP0.55□□□□□ -2.32
CCDC178-203ENST00000399177 ATP7BP35670 1465 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 MAGI2Q86UL8 1455 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 SPRR1BP22528 89 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 ADIRFQ15847 76 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 DEFB112Q30KQ8 113 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 DEFB109BQ30KR1 87 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 PKD1L3Q7Z443 1732 aa0.55□□□□□ -2.32
CCDC178-203ENST00000399177 ARHGAP35Q9NRY4 1499 aa0.54□□□□□ -2.32
CCDC178-203ENST00000399177 CEBPZOSA8MTT3 80 aa0.54□□□□□ -2.32
CCDC178-203ENST00000399177 ST20Q9HBF5 79 aa0.54□□□□□ -2.32
CCDC178-203ENST00000399177 TSC2P49815 1807 aa0.54□□□□□ -2.32
CCDC178-203ENST00000399177 LRRC9Q6ZRR7 1453 aa0.54□□□□□ -2.32
CCDC178-203ENST00000399177 U3KQA8 63 aa0.53□□□□□ -2.32
CCDC178-203ENST00000399177 OTOGQ6ZRI0 2925 aa0.53□□□□□ -2.32
CCDC178-203ENST00000399177 ANK2Q01484 3957 aa0.52□□□□□ -2.33
CCDC178-203ENST00000399177 GVINP1Q7Z2Y8 2422 aa0.52□□□□□ -2.33
CCDC178-203ENST00000399177 I3L3M4 83 aa0.52□□□□□ -2.33
CCDC178-203ENST00000399177 TMEM131LA2VDJ0 1609 aa0.52□□□□□ -2.33
CCDC178-203ENST00000399177 FMN2Q9NZ56 1722 aa0.52□□□□□ -2.33
CCDC178-203ENST00000399177 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
CCDC178-203ENST00000399177 SPTY2D1-AS1A0A0U1RR47 76 aa0.51□□□□□ -2.33
CCDC178-203ENST00000399177 NKTRP30414 1462 aaKnown RBP0.51□□□□□ -2.33
CCDC178-203ENST00000399177 ERVK-7P63135 1459 aa0.5□□□□□ -2.33
CCDC178-203ENST00000399177 CPSF4LA6NMK7 179 aaKnown RBP0.5□□□□□ -2.33
CCDC178-203ENST00000399177 UBR3Q6ZT12 1888 aa0.5□□□□□ -2.33
CCDC178-203ENST00000399177 UNC79Q9P2D8 2635 aa0.5□□□□□ -2.33
CCDC178-203ENST00000399177 COX7BP24311 80 aa0.49□□□□□ -2.33
CCDC178-203ENST00000399177 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
CCDC178-203ENST00000399177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.48□□□□□ -2.33
CCDC178-203ENST00000399177 LRRC7Q96NW7 1537 aa0.48□□□□□ -2.33
CCDC178-203ENST00000399177 COL14A1Q05707 1796 aaKnown RBP0.48□□□□□ -2.33
CCDC178-203ENST00000399177 DEFB105AQ8NG35 78 aa0.48□□□□□ -2.33
CCDC178-203ENST00000399177 GAFA1Q96PS6 74 aa0.48□□□□□ -2.33
CCDC178-203ENST00000399177 DCAF1Q9Y4B6 1507 aa0.48□□□□□ -2.33
CCDC178-203ENST00000399177 RGPD2P0DJD1 1756 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 RGPD1P0DJD0 1748 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 TRAV21A0A0B4J279 112 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 SPINK4O60575 86 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 FXYD6Q9H0Q3 95 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 DIP2BQ9P265 1576 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 QSER1Q2KHR3 1735 aa0.47□□□□□ -2.33
CCDC178-203ENST00000399177 CSMD3Q7Z407 3707 aa0.46□□□□□ -2.34
CCDC178-203ENST00000399177 NDUFB1O75438 58 aa0.46□□□□□ -2.34
CCDC178-203ENST00000399177 MRPL34Q9BQ48 92 aaKnown RBP0.46□□□□□ -2.34
CCDC178-203ENST00000399177 APLNQ9ULZ1 77 aa0.46□□□□□ -2.34
CCDC178-203ENST00000399177 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
CCDC178-203ENST00000399177 CLIP1P30622 1438 aa0.46□□□□□ -2.34
CCDC178-203ENST00000399177 H3BUT2 72 aa0.45□□□□□ -2.34
CCDC178-203ENST00000399177 BVES-AS1Q5T3Y7 98 aa0.45□□□□□ -2.34
CCDC178-203ENST00000399177 URB2Q14146 1524 aaKnown RBP0.44□□□□□ -2.34
CCDC178-203ENST00000399177 VWFP04275 2813 aa0.44□□□□□ -2.34
CCDC178-203ENST00000399177 NCOR1O75376 2440 aa0.44□□□□□ -2.34
CCDC178-203ENST00000399177 CCL22O00626 93 aa0.44□□□□□ -2.34
CCDC178-203ENST00000399177 RPL38P63173 70 aaKnown RBP0.44□□□□□ -2.34
CCDC178-203ENST00000399177 WFDC9Q8NEX5 89 aa0.44□□□□□ -2.34
CCDC178-203ENST00000399177 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
CCDC178-203ENST00000399177 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
CCDC178-203ENST00000399177 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
CCDC178-203ENST00000399177 DEFB121Q5J5C9 76 aa0.43□□□□□ -2.34
CCDC178-203ENST00000399177 KDM5DQ9BY66 1539 aa0.43□□□□□ -2.34
CCDC178-203ENST00000399177 TENM4Q6N022 2769 aa0.42□□□□□ -2.34
CCDC178-203ENST00000399177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.42□□□□□ -2.34
CCDC178-203ENST00000399177 KLK9Q2XQG4 91 aa0.42□□□□□ -2.34
CCDC178-203ENST00000399177 ABCC1P33527 1531 aa0.42□□□□□ -2.34
CCDC178-203ENST00000399177 MAST4O15021 2626 aa0.42□□□□□ -2.34
CCDC178-203ENST00000399177 BCORQ6W2J9 1755 aa0.42□□□□□ -2.34
CCDC178-203ENST00000399177 KMT2DO14686 5537 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 RRBP1Q9P2E9 1410 aaKnown RBP0.41□□□□□ -2.34
CCDC178-203ENST00000399177 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 ATP5EP2Q5VTU8 51 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
CCDC178-203ENST00000399177 LTN1O94822 1766 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 USP32Q8NFA0 1604 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 NCOA2Q15596 1464 aa0.41□□□□□ -2.34
CCDC178-203ENST00000399177 SPTA1P02549 2419 aa0.4□□□□□ -2.34
CCDC178-203ENST00000399177 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
CCDC178-203ENST00000399177 H1FX-AS1Q4G0G2 97 aa0.4□□□□□ -2.35
CCDC178-203ENST00000399177 WNK2Q9Y3S1 2297 aa0.4□□□□□ -2.35
CCDC178-203ENST00000399177 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
CCDC178-203ENST00000399177 PIK3C2BO00750 1634 aa0.39□□□□□ -2.35
CCDC178-203ENST00000399177 POLR1AO95602 1720 aaPredicted RBP0.39□□□□□ -2.35
CCDC178-203ENST00000399177 HEPN1Q6WQI6 88 aa0.39□□□□□ -2.35
CCDC178-203ENST00000399177 HIVEP3Q5T1R4 2406 aa0.39□□□□□ -2.35
CCDC178-203ENST00000399177 CFAP74Q9C0B2 1584 aa0.39□□□□□ -2.35
CCDC178-203ENST00000399177 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
CCDC178-203ENST00000399177 C18orf32Q8TCD1 76 aa0.38□□□□□ -2.35
CCDC178-203ENST00000399177 ZNF831Q5JPB2 1677 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 PREX1Q8TCU6 1659 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 CEP170BQ9Y4F5 1589 aaPredicted RBP0.37□□□□□ -2.35
CCDC178-203ENST00000399177 UMAD1C9J7I0 102 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 CDKN2A-AS1Q9UH64 79 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 ATRQ13535 2644 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 MAGI3Q5TCQ9 1506 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
CCDC178-203ENST00000399177 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
CCDC178-203ENST00000399177 CNOT1A5YKK6 2376 aaKnown RBP0.37□□□□□ -2.35
CCDC178-203ENST00000399177 TIAM2Q8IVF5 1701 aa0.36□□□□□ -2.35
CCDC178-203ENST00000399177 BSNQ9UPA5 3926 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms