RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 ICOSQ9Y6W8 199 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 MUC4Q99102 2169 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 A0A1W2PPR1 153 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 A6NDX4 124 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 DEFB104AQ8WTQ1 72 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 TENM1Q9UKZ4 2725 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 C20orf203Q8NBC4 194 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 RETNLBQ9BQ08 111 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 SNURFQ9Y675 71 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 M0QY20 66 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 IGKV3-20P01619 116 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 KRTAP1-1Q07627 177 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 ADAMTSL4-AS1Q5T5F5 129 aa4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 TMEM263Q8WUH6 116 aaKnown RBP4.62□□□□□ -1.67
TM9SF4-202ENST00000398022 PKD1L1Q8TDX9 2849 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 hDV103S1A0JD37 113 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 A0A0J9YX75 114 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 IGLV1-40P01703 118 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 TMEM61Q8N0U2 210 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 STAB1Q9NY15 2570 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV4-38-2P0DP08 117 aa4.61□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV4-61A0A0C4DH41 118 aa4.6□□□□□ -1.67
TM9SF4-202ENST00000398022 SPINK13Q1W4C9 94 aa4.6□□□□□ -1.67
TM9SF4-202ENST00000398022 NBEAL1Q6ZS30 2694 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 SORL1Q92673 2214 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 ERC2-IT1O76042 136 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 MSMBP08118 114 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 BAALC-AS2P0C853 105 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 DEFB113Q30KQ7 82 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 MAPK1IP1LQ8NDC0 245 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 ZNF580Q9UK33 172 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 IGLV4-3A0A075B6K6 122 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 C9orf116Q5BN46 136 aaPredicted RBP4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 AMELXQ99217 191 aa4.59□□□□□ -1.67
TM9SF4-202ENST00000398022 A0A0J9YXY3 114 aa4.59□□□□□ -1.68
TM9SF4-202ENST00000398022 Q5VV11 94 aa4.59□□□□□ -1.68
TM9SF4-202ENST00000398022 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.68
TM9SF4-202ENST00000398022 K7EQG2 157 aa4.58□□□□□ -1.68
TM9SF4-202ENST00000398022 IGHV3-30-3P0DP02 117 aa4.58□□□□□ -1.68
TM9SF4-202ENST00000398022 RPL28P46779 137 aaKnown RBP4.58□□□□□ -1.68
TM9SF4-202ENST00000398022 B4DSR2 109 aa4.58□□□□□ -1.68
TM9SF4-202ENST00000398022 HTN1P15515 57 aa4.58□□□□□ -1.68
TM9SF4-202ENST00000398022 IGHV3OR16-12A0A075B7B8 117 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 A0A1B0GW54 56 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 A0A087X002 238 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 A8MU10 97 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 SMR3AQ99954 134 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
TM9SF4-202ENST00000398022 Q6ZTC4 211 aa4.56□□□□□ -1.68
TM9SF4-202ENST00000398022 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
TM9SF4-202ENST00000398022 IGHV3-73A0A0B4J1V6 119 aa4.56□□□□□ -1.68
TM9SF4-202ENST00000398022 DSCR9P59020 149 aa4.56□□□□□ -1.68
TM9SF4-202ENST00000398022 MIAQ16674 131 aa4.56□□□□□ -1.68
TM9SF4-202ENST00000398022 INAFM1C9JVW0 142 aa4.55□□□□□ -1.68
TM9SF4-202ENST00000398022 IGHV4-30-2A0A087WSY4 118 aa4.55□□□□□ -1.68
TM9SF4-202ENST00000398022 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
TM9SF4-202ENST00000398022 IGHV4-59P01825 116 aa4.55□□□□□ -1.68
TM9SF4-202ENST00000398022 DEFB131AP59861 70 aa4.55□□□□□ -1.68
TM9SF4-202ENST00000398022 A0A096LNT2 108 aa4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 ZNF625Q96I27 306 aaPredicted RBP4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 TRBV7-4A0A0J9YYF1 115 aa4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 LY6G6DO95868 133 aa4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 DEFB112Q30KQ8 113 aa4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 RNASE13Q5GAN3 156 aaKnown RBP4.54□□□□□ -1.68
TM9SF4-202ENST00000398022 Q8N814 137 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 TMEM254Q8TBM7 123 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 COL7A1Q02388 2944 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 IGKV2-29A2NJV5 120 aaPredicted RBP4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 A6NED7 52 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 INSP01308 110 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 CRPP02741 224 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 MOBPQ13875 183 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
TM9SF4-202ENST00000398022 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 LITAFQ99732 161 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 NDUFA1O15239 70 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 IGLV1-51P01701 117 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 IGHV3-53P01767 116 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 RNASE1P07998 156 aaKnown RBP4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 MGAM2Q2M2H8 2515 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 C10orf99Q6UWK7 81 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 CHCHD7Q9BUK0 85 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
TM9SF4-202ENST00000398022 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 PSCAO43653 123 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 PROK1P58294 105 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 IGHV3-38A0A0C4DH36 116 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 RPL36AP83881 106 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms