RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LOC389332A0A1B0GUA5 103 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 IGIPA6NJ69 53 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 K7EMI3 77 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 HERVK_113P63121 156 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 ORMDL2Q53FV1 153 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 Q8N8P6 123 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 LINC00167Q96N53 147 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 MAP1LC3AQ9H492 121 aa5.11□□□□□ -1.59
CAPN3-208ENST00000397204 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
CAPN3-208ENST00000397204 CXCL5P42830 114 aa5.1□□□□□ -1.59
CAPN3-208ENST00000397204 FAM229BQ4G0N7 80 aa5.1□□□□□ -1.59
CAPN3-208ENST00000397204 CDKN2A-AS1Q9UH64 79 aa5.1□□□□□ -1.59
CAPN3-208ENST00000397204 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
CAPN3-208ENST00000397204 TPRXLQ17RH7 258 aa5.09□□□□□ -1.59
CAPN3-208ENST00000397204 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
CAPN3-208ENST00000397204 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
CAPN3-208ENST00000397204 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
CAPN3-208ENST00000397204 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
CAPN3-208ENST00000397204 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
CAPN3-208ENST00000397204 LINC00304Q8N9R0 145 aa5.08□□□□□ -1.6
CAPN3-208ENST00000397204 NXT2Q9NPJ8 142 aaKnown RBP5.08□□□□□ -1.6
CAPN3-208ENST00000397204 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 IGKV2D-26A0A0A0MRZ7 120 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 UBE2AP49459 152 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 TIMM17AQ99595 171 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 RETNLBQ9BQ08 111 aa5.07□□□□□ -1.6
CAPN3-208ENST00000397204 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
CAPN3-208ENST00000397204 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
CAPN3-208ENST00000397204 COX7B2Q8TF08 81 aa5.06□□□□□ -1.6
CAPN3-208ENST00000397204 TOMM6Q96B49 74 aa5.06□□□□□ -1.6
CAPN3-208ENST00000397204 TINCRA0A1B0GVN0 87 aa5.05□□□□□ -1.6
CAPN3-208ENST00000397204 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
CAPN3-208ENST00000397204 RAB5BP61020 215 aa5.05□□□□□ -1.6
CAPN3-208ENST00000397204 PNRC1Q12796 327 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-208ENST00000397204 MAP1LC3CQ9BXW4 147 aa5.05□□□□□ -1.6
CAPN3-208ENST00000397204 LINC01549A6NIU2 74 aa5.04□□□□□ -1.6
CAPN3-208ENST00000397204 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
CAPN3-208ENST00000397204 SPAG11AQ6PDA7 123 aa5.04□□□□□ -1.6
CAPN3-208ENST00000397204 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
CAPN3-208ENST00000397204 IGLV5-45A0A087WSX0 123 aa5.03□□□□□ -1.6
CAPN3-208ENST00000397204 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
CAPN3-208ENST00000397204 SCO1O75880 301 aa5.03□□□□□ -1.6
CAPN3-208ENST00000397204 PPDPFQ9H3Y8 114 aa5.03□□□□□ -1.6
CAPN3-208ENST00000397204 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
CAPN3-208ENST00000397204 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
CAPN3-208ENST00000397204 PLEKHB2Q96CS7 222 aa5.02□□□□□ -1.61
CAPN3-208ENST00000397204 GNB1LQ9BYB4 327 aa5.02□□□□□ -1.61
CAPN3-208ENST00000397204 CST9LQ9H4G1 147 aa5.02□□□□□ -1.61
CAPN3-208ENST00000397204 ATP5LO75964 103 aa5.01□□□□□ -1.61
CAPN3-208ENST00000397204 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
CAPN3-208ENST00000397204 FP248Q71RG6 208 aaPredicted RBP5.01□□□□□ -1.61
CAPN3-208ENST00000397204 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
CAPN3-208ENST00000397204 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
CAPN3-208ENST00000397204 H3BRM9 83 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 SPINK8P0C7L1 97 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 ADCYAP1P18509 176 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 PRLHP81277 87 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 CBLN2Q8IUK8 224 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 VPS25Q9BRG1 176 aa5□□□□□ -1.61
CAPN3-208ENST00000397204 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 M0R378 163 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 VPREB1P12018 145 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 DDTP30046 118 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 PFN2P35080 140 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 COX17Q14061 63 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 PMVKQ15126 192 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 SND1-IT1Q9HBX3 110 aa4.99□□□□□ -1.61
CAPN3-208ENST00000397204 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
CAPN3-208ENST00000397204 KIAA1644Q3SXP7 199 aa4.98□□□□□ -1.61
CAPN3-208ENST00000397204 C3orf22Q8N5N4 141 aa4.98□□□□□ -1.61
CAPN3-208ENST00000397204 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-208ENST00000397204 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
CAPN3-208ENST00000397204 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 UQCC3Q6UW78 93 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 ERG28Q9UKR5 140 aa4.96□□□□□ -1.62
CAPN3-208ENST00000397204 SPINK1P00995 79 aa4.95□□□□□ -1.62
CAPN3-208ENST00000397204 IGLC3P0DOY3 106 aa4.95□□□□□ -1.62
CAPN3-208ENST00000397204 SFTA2Q6UW10 78 aa4.95□□□□□ -1.62
CAPN3-208ENST00000397204 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-208ENST00000397204 SEC61BP60468 96 aaKnown RBP4.94□□□□□ -1.62
CAPN3-208ENST00000397204 FA2HQ7L5A8 372 aa4.94□□□□□ -1.62
CAPN3-208ENST00000397204 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-208ENST00000397204 Q8NDZ9 215 aa4.93□□□□□ -1.62
CAPN3-208ENST00000397204 ZNF625Q96I27 306 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-208ENST00000397204 SMCO4Q9NRQ5 59 aa4.93□□□□□ -1.62
CAPN3-208ENST00000397204 NDUFA6P56556 154 aa4.92□□□□□ -1.62
CAPN3-208ENST00000397204 DAND5Q8N907 189 aa4.92□□□□□ -1.62
CAPN3-208ENST00000397204 Q8NBF4 154 aa4.92□□□□□ -1.62
CAPN3-208ENST00000397204 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
CAPN3-208ENST00000397204 V9GYY9 64 aa4.92□□□□□ -1.62
CAPN3-208ENST00000397204 M0R143 59 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms