RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 GNG8Q9UK08 70 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 hADV29S1A0JD25 119 aa-1.12□□□□□ -2.59
CMC1-202ENST00000396610 HSD52Q0P140 79 aa-1.12□□□□□ -2.59
CMC1-202ENST00000396610 REV3LO60673 3130 aa-1.12□□□□□ -2.59
CMC1-202ENST00000396610 XRN1Q8IZH2 1706 aaKnown RBP-1.12□□□□□ -2.59
CMC1-202ENST00000396610 PKD1L2Q7Z442 2459 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 ARHGAP5Q13017 1502 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 H3BQF6 201 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 NKTRP30414 1462 aaKnown RBP-1.13□□□□□ -2.59
CMC1-202ENST00000396610 CCDC168Q8NDH2 2452 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 LYSTQ99698 3801 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 DMXL1Q9Y485 3027 aa-1.13□□□□□ -2.59
CMC1-202ENST00000396610 ANKRD11Q6UB99 2663 aaPredicted RBP-1.13□□□□□ -2.59
CMC1-202ENST00000396610 USP9XQ93008 2570 aaPredicted RBP-1.14□□□□□ -2.59
CMC1-202ENST00000396610 KALRNO60229 2985 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 MRPS10P82664 201 aaKnown RBP-1.14□□□□□ -2.59
CMC1-202ENST00000396610 GTF2H5Q6ZYL4 71 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 C9orf62Q8N4C0 152 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 SPRR2FQ96RM1 72 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 CUL7Q14999 1698 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 RYR2Q92736 4967 aa-1.14□□□□□ -2.59
CMC1-202ENST00000396610 NALCNQ8IZF0 1738 aa-1.15□□□□□ -2.59
CMC1-202ENST00000396610 SCN7AQ01118 1682 aa-1.15□□□□□ -2.59
CMC1-202ENST00000396610 A0A0G2JND7 137 aa-1.15□□□□□ -2.59
CMC1-202ENST00000396610 DEFB112Q30KQ8 113 aa-1.15□□□□□ -2.59
CMC1-202ENST00000396610 DEFB107AQ8IZN7 70 aa-1.15□□□□□ -2.59
CMC1-202ENST00000396610 VPS13BQ7Z7G8 4022 aa-1.16□□□□□ -2.59
CMC1-202ENST00000396610 H0Y9P7 68 aa-1.16□□□□□ -2.6
CMC1-202ENST00000396610 GNGT1P63211 74 aa-1.16□□□□□ -2.6
CMC1-202ENST00000396610 TMEM203Q969S6 136 aa-1.16□□□□□ -2.6
CMC1-202ENST00000396610 C2orf88Q9BSF0 95 aa-1.16□□□□□ -2.6
CMC1-202ENST00000396610 PLECQ15149 4684 aaKnown RBP-1.16□□□□□ -2.6
CMC1-202ENST00000396610 MGAM2Q2M2H8 2515 aa-1.17□□□□□ -2.6
CMC1-202ENST00000396610 LRRK2Q5S007 2527 aa-1.17□□□□□ -2.6
CMC1-202ENST00000396610 TOP2BQ02880 1626 aa-1.17□□□□□ -2.6
CMC1-202ENST00000396610 CACFD1Q9UGQ2 172 aa-1.17□□□□□ -2.6
CMC1-202ENST00000396610 MAPKBP1O60336 1514 aa-1.17□□□□□ -2.6
CMC1-202ENST00000396610 PZPP20742 1482 aa-1.18□□□□□ -2.6
CMC1-202ENST00000396610 ARMS2P0C7Q2 107 aa-1.18□□□□□ -2.6
CMC1-202ENST00000396610 ASIPP42127 132 aa-1.18□□□□□ -2.6
CMC1-202ENST00000396610 PMCHL1Q16048 86 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 PSMG4Q5JS54 123 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 EDC4Q6P2E9 1401 aaKnown RBP-1.19□□□□□ -2.6
CMC1-202ENST00000396610 NRKQ7Z2Y5 1582 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 MRPL34Q9BQ48 92 aaKnown RBP-1.19□□□□□ -2.6
CMC1-202ENST00000396610 PAPPA2Q9BXP8 1791 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 A0A0C4DFX4 3053 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 NBEAQ8NFP9 2946 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 DNAH11Q96DT5 4516 aa-1.19□□□□□ -2.6
CMC1-202ENST00000396610 FAM186AA6NE01 2351 aa-1.2□□□□□ -2.6
CMC1-202ENST00000396610 DSPP15924 2871 aaKnown RBP-1.2□□□□□ -2.6
CMC1-202ENST00000396610 TRBV25-1A0A075B6N4 114 aa-1.2□□□□□ -2.6
CMC1-202ENST00000396610 NDUFC1O43677 76 aa-1.2□□□□□ -2.6
CMC1-202ENST00000396610 HEPN1Q6WQI6 88 aa-1.2□□□□□ -2.6
CMC1-202ENST00000396610 PDE4DIPQ5VU43 2346 aa-1.2□□□□□ -2.6
CMC1-202ENST00000396610 WDR87Q6ZQQ6 2873 aa-1.21□□□□□ -2.6
CMC1-202ENST00000396610 ANK3Q12955 4377 aaKnown RBP-1.21□□□□□ -2.6
CMC1-202ENST00000396610 TRANK1O15050 2925 aa-1.21□□□□□ -2.6
CMC1-202ENST00000396610 LINC00587B1AMM8 73 aa-1.21□□□□□ -2.6
CMC1-202ENST00000396610 RNF213Q63HN8 5207 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 ABCC5O15440 1437 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 MTORP42345 2549 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 UTP20O75691 2785 aaKnown RBP-1.22□□□□□ -2.6
CMC1-202ENST00000396610 NUP188Q5SRE5 1749 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 CCL22O00626 93 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 GNGT2O14610 69 aa-1.22□□□□□ -2.6
CMC1-202ENST00000396610 MARF1Q9Y4F3 1742 aaKnown RBP-1.23□□□□□ -2.61
CMC1-202ENST00000396610 SLIT1O75093 1534 aa-1.23□□□□□ -2.61
CMC1-202ENST00000396610 TRAV30A0A087WSZ9 112 aa-1.23□□□□□ -2.61
CMC1-202ENST00000396610 MT1AP04731 61 aa-1.23□□□□□ -2.61
CMC1-202ENST00000396610 LAMA3Q16787 3333 aa-1.23□□□□□ -2.61
CMC1-202ENST00000396610 COL4A6Q14031 1691 aa-1.23□□□□□ -2.61
CMC1-202ENST00000396610 DNAH1Q9P2D7 4330 aa-1.24□□□□□ -2.61
CMC1-202ENST00000396610 PDCD11Q14690 1871 aaKnown RBP-1.24□□□□□ -2.61
CMC1-202ENST00000396610 GCN1Q92616 2671 aaKnown RBP-1.24□□□□□ -2.61
CMC1-202ENST00000396610 SPTY2D1-AS1A0A0U1RR47 76 aa-1.24□□□□□ -2.61
CMC1-202ENST00000396610 TRGV9Q99603 122 aa-1.24□□□□□ -2.61
CMC1-202ENST00000396610 CDKN2A-AS1Q9UH64 79 aa-1.24□□□□□ -2.61
CMC1-202ENST00000396610 DNHD1Q96M86 4753 aa-1.24□□□□□ -2.61
CMC1-202ENST00000396610 CEP290O15078 2479 aa-1.25□□□□□ -2.61
CMC1-202ENST00000396610 APOBP04114 4563 aaKnown RBP-1.25□□□□□ -2.61
CMC1-202ENST00000396610 SPHKAPQ2M3C7 1700 aa-1.25□□□□□ -2.61
CMC1-202ENST00000396610 TRBV7-7A0A0K0K1E9 115 aa-1.25□□□□□ -2.61
CMC1-202ENST00000396610 C20orf202A1L168 122 aa-1.25□□□□□ -2.61
CMC1-202ENST00000396610 LELP1Q5T871 98 aa-1.25□□□□□ -2.61
CMC1-202ENST00000396610 EIF4G3O43432 1585 aaKnown RBP-1.25□□□□□ -2.61
CMC1-202ENST00000396610 NBEAL2Q6ZNJ1 2754 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 H7BZZ5 65 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 MPC2O95563 127 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 UQCRHP07919 91 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 WFDC13Q8IUB5 93 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 HIGD1BQ9P298 99 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 CLIP1P30622 1438 aa-1.27□□□□□ -2.61
CMC1-202ENST00000396610 SACSQ9NZJ4 4579 aa-1.28□□□□□ -2.61
CMC1-202ENST00000396610 H0YGG7 62 aa-1.28□□□□□ -2.61
CMC1-202ENST00000396610 SARNPP82979 210 aaKnown RBP-1.28□□□□□ -2.61
CMC1-202ENST00000396610 RELNP78509 3460 aa-1.28□□□□□ -2.61
CMC1-202ENST00000396610 MLH3Q9UHC1 1453 aa-1.29□□□□□ -2.62
CMC1-202ENST00000396610 H3BNG1 76 aa-1.29□□□□□ -2.62
CMC1-202ENST00000396610 CMYA5Q8N3K9 4069 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms