RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
TNFSF13-205ENST00000396545 CXCL5P42830 114 aa11.56□□□□□ -0.56
TNFSF13-205ENST00000396545 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
TNFSF13-205ENST00000396545 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
TNFSF13-205ENST00000396545 F8W1H4 67 aa11.55□□□□□ -0.56
TNFSF13-205ENST00000396545 PRO0461Q9UI25 63 aa11.54□□□□□ -0.56
TNFSF13-205ENST00000396545 MALP21145 153 aa11.54□□□□□ -0.56
TNFSF13-205ENST00000396545 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.56
TNFSF13-205ENST00000396545 LINC00158P58513 81 aa11.54□□□□□ -0.56
TNFSF13-205ENST00000396545 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
TNFSF13-205ENST00000396545 DMBT1Q9UGM3 2413 aaPredicted RBP11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 FAT1Q14517 4588 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 H7C2G1 150 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 TCL1BO95988 128 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 PSMB2P49721 201 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 Q1RN00 199 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 RMI2Q96E14 147 aa11.53□□□□□ -0.56
TNFSF13-205ENST00000396545 TRIAP1O43715 76 aa11.52□□□□□ -0.57
TNFSF13-205ENST00000396545 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
TNFSF13-205ENST00000396545 CKS1BP61024 79 aa11.52□□□□□ -0.57
TNFSF13-205ENST00000396545 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
TNFSF13-205ENST00000396545 SCGB1C2P0DMR2 95 aa11.51□□□□□ -0.57
TNFSF13-205ENST00000396545 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
TNFSF13-205ENST00000396545 C2orf82Q6UX34 121 aa11.51□□□□□ -0.57
TNFSF13-205ENST00000396545 A0A087WTM6 91 aa11.5□□□□□ -0.57
TNFSF13-205ENST00000396545 XGP55808 180 aa11.5□□□□□ -0.57
TNFSF13-205ENST00000396545 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
TNFSF13-205ENST00000396545 COX17Q14061 63 aa11.5□□□□□ -0.57
TNFSF13-205ENST00000396545 PFN2P35080 140 aa11.49□□□□□ -0.57
TNFSF13-205ENST00000396545 WFDC2Q14508 124 aa11.49□□□□□ -0.57
TNFSF13-205ENST00000396545 OCIAD2Q56VL3 154 aa11.49□□□□□ -0.57
TNFSF13-205ENST00000396545 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
TNFSF13-205ENST00000396545 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
TNFSF13-205ENST00000396545 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
TNFSF13-205ENST00000396545 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
TNFSF13-205ENST00000396545 VPS13BQ7Z7G8 4022 aa11.47□□□□□ -0.57
TNFSF13-205ENST00000396545 MYCBP2O75592 4640 aa11.47□□□□□ -0.57
TNFSF13-205ENST00000396545 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
TNFSF13-205ENST00000396545 IGKV2D-24A0A075B6R9 120 aa11.46□□□□□ -0.57
TNFSF13-205ENST00000396545 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
TNFSF13-205ENST00000396545 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 COX6CP09669 75 aa11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 F8WDY8 70 aa11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
TNFSF13-205ENST00000396545 Q5VSD8 79 aa11.44□□□□□ -0.58
TNFSF13-205ENST00000396545 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
TNFSF13-205ENST00000396545 INAFM2P0DMQ5 153 aa11.43□□□□□ -0.58
TNFSF13-205ENST00000396545 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
TNFSF13-205ENST00000396545 Q9HAA7 133 aa11.43□□□□□ -0.58
TNFSF13-205ENST00000396545 NTN5Q8WTR8 489 aaPredicted RBP11.42□□□□□ -0.58
TNFSF13-205ENST00000396545 K7ERU9 68 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 M0QXV9 152 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 UNQ6190/PRO20217Q6UXQ8 127 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 LINC01600Q96MT4 127 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 FLG2Q5D862 2391 aaPredicted RBP11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 LINC01620Q4KN68 170 aa11.41□□□□□ -0.58
TNFSF13-205ENST00000396545 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
TNFSF13-205ENST00000396545 LST1O00453 97 aa11.4□□□□□ -0.58
TNFSF13-205ENST00000396545 NDUFC2O95298 119 aa11.4□□□□□ -0.58
TNFSF13-205ENST00000396545 RPL28P46779 137 aaKnown RBP11.39□□□□□ -0.59
TNFSF13-205ENST00000396545 ETDBQ3ZM63 59 aa11.39□□□□□ -0.59
TNFSF13-205ENST00000396545 C9orf116Q5BN46 136 aaPredicted RBP11.39□□□□□ -0.59
TNFSF13-205ENST00000396545 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
TNFSF13-205ENST00000396545 LRCOL1A6NCL2 159 aa11.38□□□□□ -0.59
TNFSF13-205ENST00000396545 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
TNFSF13-205ENST00000396545 LINC00526Q96FQ7 95 aa11.38□□□□□ -0.59
TNFSF13-205ENST00000396545 C9JAW5 83 aa11.37□□□□□ -0.59
TNFSF13-205ENST00000396545 CLEC2BQ92478 149 aa11.37□□□□□ -0.59
TNFSF13-205ENST00000396545 SLC25A20O43772 301 aa11.37□□□□□ -0.59
TNFSF13-205ENST00000396545 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
TNFSF13-205ENST00000396545 TRBV10-2A0A0K0K1G8 114 aa11.36□□□□□ -0.59
TNFSF13-205ENST00000396545 PSCAO43653 123 aa11.36□□□□□ -0.59
TNFSF13-205ENST00000396545 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
TNFSF13-205ENST00000396545 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
TNFSF13-205ENST00000396545 HAMPP81172 84 aa11.34□□□□□ -0.59
TNFSF13-205ENST00000396545 SMIM11BQ8TCY0 68 aa11.34□□□□□ -0.59
TNFSF13-205ENST00000396545 HIGD2BQ4VC39 106 aa11.33□□□□□ -0.6
TNFSF13-205ENST00000396545 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
TNFSF13-205ENST00000396545 Q8N814 137 aa11.33□□□□□ -0.6
TNFSF13-205ENST00000396545 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
TNFSF13-205ENST00000396545 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
TNFSF13-205ENST00000396545 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
TNFSF13-205ENST00000396545 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
TNFSF13-205ENST00000396545 H3BT86 120 aa11.31□□□□□ -0.6
TNFSF13-205ENST00000396545 TRACP01848 142 aa11.3□□□□□ -0.6
TNFSF13-205ENST00000396545 Q8NDZ9 215 aa11.3□□□□□ -0.6
TNFSF13-205ENST00000396545 DNAH8Q96JB1 4490 aa11.3□□□□□ -0.6
TNFSF13-205ENST00000396545 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
TNFSF13-205ENST00000396545 C14orf177Q52M58 125 aa11.29□□□□□ -0.6
TNFSF13-205ENST00000396545 Q6ZRU5 148 aa11.29□□□□□ -0.6
TNFSF13-205ENST00000396545 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
TNFSF13-205ENST00000396545 J3QR89 54 aa11.28□□□□□ -0.6
TNFSF13-205ENST00000396545 PPDPFLQ8WWR9 84 aa11.28□□□□□ -0.6
TNFSF13-205ENST00000396545 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
TNFSF13-205ENST00000396545 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
TNFSF13-205ENST00000396545 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
TNFSF13-205ENST00000396545 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms