RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
VCPKMT-201ENST00000395859 H3BRM9 83 aa8.03□□□□□ -1.12
VCPKMT-201ENST00000395859 GAGE2BQ13066 116 aa8.03□□□□□ -1.12
VCPKMT-201ENST00000395859 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
VCPKMT-201ENST00000395859 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
VCPKMT-201ENST00000395859 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
VCPKMT-201ENST00000395859 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
VCPKMT-201ENST00000395859 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
VCPKMT-201ENST00000395859 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
VCPKMT-201ENST00000395859 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
VCPKMT-201ENST00000395859 GEMIN7Q9H840 131 aaKnown RBP8.01□□□□□ -1.13
VCPKMT-201ENST00000395859 IGHV1-58A0A0C4DH39 117 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 M0R143 59 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 NMUP48645 174 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 SS18Q15532 418 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 Q6ZUT4 128 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 LINC01561Q8N1V8 128 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 C14orf144Q96I85 54 aa8□□□□□ -1.13
VCPKMT-201ENST00000395859 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
VCPKMT-201ENST00000395859 TAL2Q16559 108 aa7.99□□□□□ -1.13
VCPKMT-201ENST00000395859 TMEM170BQ5T4T1 132 aa7.99□□□□□ -1.13
VCPKMT-201ENST00000395859 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
VCPKMT-201ENST00000395859 LINC00587B1AMM8 73 aa7.98□□□□□ -1.13
VCPKMT-201ENST00000395859 LEPROTO15243 131 aa7.98□□□□□ -1.13
VCPKMT-201ENST00000395859 ZNF22P17026 224 aaPredicted RBP7.98□□□□□ -1.13
VCPKMT-201ENST00000395859 XCL1P47992 114 aa7.98□□□□□ -1.13
VCPKMT-201ENST00000395859 CD164L2Q6UWJ8 174 aa7.98□□□□□ -1.13
VCPKMT-201ENST00000395859 A0A087WZ39 114 aa7.97□□□□□ -1.13
VCPKMT-201ENST00000395859 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
VCPKMT-201ENST00000395859 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
VCPKMT-201ENST00000395859 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
VCPKMT-201ENST00000395859 LINC00242Q5T6M2 205 aa7.96□□□□□ -1.14
VCPKMT-201ENST00000395859 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
VCPKMT-201ENST00000395859 J3QQQ9 107 aa7.95□□□□□ -1.14
VCPKMT-201ENST00000395859 APOMO95445 188 aa7.95□□□□□ -1.14
VCPKMT-201ENST00000395859 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
VCPKMT-201ENST00000395859 HSD52Q0P140 79 aa7.95□□□□□ -1.14
VCPKMT-201ENST00000395859 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
VCPKMT-201ENST00000395859 A0A087X002 238 aa7.94□□□□□ -1.14
VCPKMT-201ENST00000395859 IGKV2D-26A0A0A0MRZ7 120 aa7.94□□□□□ -1.14
VCPKMT-201ENST00000395859 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
VCPKMT-201ENST00000395859 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 CRYGAP11844 174 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 MALP21145 153 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 CTAG1AP78358 180 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 Q6ZVH6 145 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
VCPKMT-201ENST00000395859 TRAV13-1A0A0B4J241 112 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 ZNF815PA8K554 130 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 COX7A2LO14548 114 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 C2orf91Q6ZV80 131 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 COPS9Q8WXC6 57 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
VCPKMT-201ENST00000395859 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 IGHV3OR16-9A0A0B4J2B5 98 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 TIMM17BO60830 172 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 HERV-K104P63124 156 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 COL5A1-AS1Q5SY13 56 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 PPDPFQ9H3Y8 114 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
VCPKMT-201ENST00000395859 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 A6NDN8 102 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 SSPOA2VEC9 5147 aa7.9□□□□□ -1.14
VCPKMT-201ENST00000395859 TMEM238LA0A1B0GVL6 79 aa7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 A6NJY4 79 aa7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 NDUFA1O15239 70 aa7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 RNASE13Q5GAN3 156 aaKnown RBP7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 SNHG12Q9BXW3 62 aa7.89□□□□□ -1.15
VCPKMT-201ENST00000395859 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 ZNF861PO60384 105 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 CXCL5P42830 114 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
VCPKMT-201ENST00000395859 F8WDY8 70 aa7.87□□□□□ -1.15
VCPKMT-201ENST00000395859 MT1HP80294 61 aa7.87□□□□□ -1.15
VCPKMT-201ENST00000395859 ORAOV1Q8WV07 137 aa7.87□□□□□ -1.15
VCPKMT-201ENST00000395859 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
VCPKMT-201ENST00000395859 IFITM1P13164 125 aa7.86□□□□□ -1.15
VCPKMT-201ENST00000395859 C5orf38Q86SI9 138 aa7.86□□□□□ -1.15
VCPKMT-201ENST00000395859 CEND1Q8N111 149 aa7.86□□□□□ -1.15
VCPKMT-201ENST00000395859 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
VCPKMT-201ENST00000395859 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
VCPKMT-201ENST00000395859 SPINK8P0C7L1 97 aa7.85□□□□□ -1.15
VCPKMT-201ENST00000395859 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
VCPKMT-201ENST00000395859 Q8IZM0 81 aa7.85□□□□□ -1.15
VCPKMT-201ENST00000395859 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
VCPKMT-201ENST00000395859 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
VCPKMT-201ENST00000395859 COX7B2Q8TF08 81 aa7.84□□□□□ -1.15
VCPKMT-201ENST00000395859 SPANXDQ9BXN6 97 aa7.84□□□□□ -1.15
VCPKMT-201ENST00000395859 SPANXCQ9NY87 97 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms