RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 C19orf73Q9NVV2 129 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 PRO0255Q9UI72 69 aa11.49□□□□□ -0.57
SIPA1-201ENST00000394224 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
SIPA1-201ENST00000394224 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
SIPA1-201ENST00000394224 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
SIPA1-201ENST00000394224 C4orf26Q17RF5 130 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 J3KT08 172 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 HRCT1Q6UXD1 115 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 MGAM2Q2M2H8 2515 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 CYSRT1A8MQ03 144 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 CCKP06307 115 aa11.47□□□□□ -0.57
SIPA1-201ENST00000394224 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
SIPA1-201ENST00000394224 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.57
SIPA1-201ENST00000394224 NSD1Q96L73 2696 aaPredicted RBP11.46□□□□□ -0.58
SIPA1-201ENST00000394224 RBM3P98179 157 aaKnown RBP11.45□□□□□ -0.58
SIPA1-201ENST00000394224 PRB2P02812 416 aaPredicted RBP11.45□□□□□ -0.58
SIPA1-201ENST00000394224 KRTAP1-3Q8IUG1 177 aa11.44□□□□□ -0.58
SIPA1-201ENST00000394224 TMEM256-PLSCR3K7ERE1 68 aa11.43□□□□□ -0.58
SIPA1-201ENST00000394224 Q6JHZ5 121 aa11.43□□□□□ -0.58
SIPA1-201ENST00000394224 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
SIPA1-201ENST00000394224 Q8IZM0 81 aa11.42□□□□□ -0.58
SIPA1-201ENST00000394224 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
SIPA1-201ENST00000394224 OXTP01178 125 aa11.41□□□□□ -0.58
SIPA1-201ENST00000394224 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
SIPA1-201ENST00000394224 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
SIPA1-201ENST00000394224 KRTAP10-3P60369 221 aa11.4□□□□□ -0.58
SIPA1-201ENST00000394224 X6R8D5 127 aa11.4□□□□□ -0.58
SIPA1-201ENST00000394224 RETNQ9HD89 108 aa11.4□□□□□ -0.59
SIPA1-201ENST00000394224 C3orf84H3BNL1 204 aa11.39□□□□□ -0.59
SIPA1-201ENST00000394224 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
SIPA1-201ENST00000394224 DPH3Q96FX2 82 aa11.39□□□□□ -0.59
SIPA1-201ENST00000394224 RMI2Q96E14 147 aa11.39□□□□□ -0.59
SIPA1-201ENST00000394224 CRYGAP11844 174 aa11.38□□□□□ -0.59
SIPA1-201ENST00000394224 JMJD7-PLA2G4BH0Y9G9 81 aa11.37□□□□□ -0.59
SIPA1-201ENST00000394224 SMIM9A6NGZ8 99 aa11.37□□□□□ -0.59
SIPA1-201ENST00000394224 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
SIPA1-201ENST00000394224 LINC00575Q6W349 94 aa11.35□□□□□ -0.59
SIPA1-201ENST00000394224 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
SIPA1-201ENST00000394224 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
SIPA1-201ENST00000394224 Q6ZVQ6 151 aa11.33□□□□□ -0.6
SIPA1-201ENST00000394224 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
SIPA1-201ENST00000394224 WFDC10BQ8IUB3 73 aa11.32□□□□□ -0.6
SIPA1-201ENST00000394224 INAFM1C9JVW0 142 aa11.3□□□□□ -0.6
SIPA1-201ENST00000394224 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
SIPA1-201ENST00000394224 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
SIPA1-201ENST00000394224 LY6G6DO95868 133 aa11.3□□□□□ -0.6
SIPA1-201ENST00000394224 OBSCN-AS1Q96MR7 158 aa11.3□□□□□ -0.6
SIPA1-201ENST00000394224 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 IGKV2D-24A0A075B6R9 120 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 RPL37AP8A6NKH3 93 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 TENM2Q9NT68 2774 aa11.29□□□□□ -0.6
SIPA1-201ENST00000394224 Q6ZQT0 140 aa11.28□□□□□ -0.6
SIPA1-201ENST00000394224 DIRC1Q969H9 104 aa11.28□□□□□ -0.6
SIPA1-201ENST00000394224 F8WEM9 126 aa11.28□□□□□ -0.6
SIPA1-201ENST00000394224 TMEM258P61165 79 aa11.27□□□□□ -0.61
SIPA1-201ENST00000394224 BPY2O14599 106 aa11.27□□□□□ -0.61
SIPA1-201ENST00000394224 OXLD1Q5BKU9 147 aa11.27□□□□□ -0.61
SIPA1-201ENST00000394224 ZNF73O43830 326 aaPredicted RBP11.26□□□□□ -0.61
SIPA1-201ENST00000394224 A0A0G2JQZ4 141 aa11.25□□□□□ -0.61
SIPA1-201ENST00000394224 A0A1W2PNN7 141 aa11.25□□□□□ -0.61
SIPA1-201ENST00000394224 MPLKIPQ8TAP9 179 aa11.25□□□□□ -0.61
SIPA1-201ENST00000394224 KRTAP1-1Q07627 177 aa11.25□□□□□ -0.61
SIPA1-201ENST00000394224 COX7BP24311 80 aa11.24□□□□□ -0.61
SIPA1-201ENST00000394224 MUC7Q8TAX7 377 aa11.24□□□□□ -0.61
SIPA1-201ENST00000394224 FAM236DA0A1B0GTK5 79 aa11.23□□□□□ -0.61
SIPA1-201ENST00000394224 FAM236CP0DP71 79 aa11.23□□□□□ -0.61
SIPA1-201ENST00000394224 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
SIPA1-201ENST00000394224 Q6ZRU5 148 aa11.23□□□□□ -0.61
SIPA1-201ENST00000394224 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
SIPA1-201ENST00000394224 PRR4Q16378 134 aa11.22□□□□□ -0.61
SIPA1-201ENST00000394224 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
SIPA1-201ENST00000394224 IGHV4-30-4P0DP06 118 aa11.21□□□□□ -0.61
SIPA1-201ENST00000394224 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
SIPA1-201ENST00000394224 C5orf47Q569G3 176 aa11.2□□□□□ -0.62
SIPA1-201ENST00000394224 DEFB116Q30KQ4 102 aa11.2□□□□□ -0.62
SIPA1-201ENST00000394224 NDUFC2O95298 119 aa11.19□□□□□ -0.62
SIPA1-201ENST00000394224 Q6ZTC4 211 aa11.19□□□□□ -0.62
SIPA1-201ENST00000394224 COX17Q14061 63 aa11.19□□□□□ -0.62
SIPA1-201ENST00000394224 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
SIPA1-201ENST00000394224 APOC4P55056 127 aa11.17□□□□□ -0.62
SIPA1-201ENST00000394224 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
SIPA1-201ENST00000394224 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
SIPA1-201ENST00000394224 NREPQ16612 68 aa11.16□□□□□ -0.62
SIPA1-201ENST00000394224 A0A0U1RQV1 116 aa11.16□□□□□ -0.62
SIPA1-201ENST00000394224 LELP1Q5T871 98 aa11.15□□□□□ -0.62
SIPA1-201ENST00000394224 KMT2BQ9UMN6 2715 aaPredicted RBP11.15□□□□□ -0.62
SIPA1-201ENST00000394224 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
SIPA1-201ENST00000394224 Q8NAQ8 132 aa11.15□□□□□ -0.63
SIPA1-201ENST00000394224 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.63
SIPA1-201ENST00000394224 FAM168BA1KXE4 195 aa11.14□□□□□ -0.63
SIPA1-201ENST00000394224 IGLV6-57P01721 117 aa11.14□□□□□ -0.63
SIPA1-201ENST00000394224 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms