RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 H7BZZ5 65 aa6.92□□□□□ -1.3
PSEN1-204ENST00000394164 C16orf95Q9H693 158 aa6.92□□□□□ -1.3
PSEN1-204ENST00000394164 LYPD5Q6UWN5 251 aa6.91□□□□□ -1.3
PSEN1-204ENST00000394164 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
PSEN1-204ENST00000394164 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
PSEN1-204ENST00000394164 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
PSEN1-204ENST00000394164 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-204ENST00000394164 SCXQ7RTU7 201 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 MAST4O15021 2626 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 M0R2N4 97 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 NOTCH1P46531 2555 aa6.9□□□□□ -1.3
PSEN1-204ENST00000394164 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.31
PSEN1-204ENST00000394164 GYPEP15421 78 aa6.9□□□□□ -1.31
PSEN1-204ENST00000394164 HTN3P15516 51 aa6.9□□□□□ -1.31
PSEN1-204ENST00000394164 Q8N3U1 123 aa6.89□□□□□ -1.31
PSEN1-204ENST00000394164 S100A7L2Q5SY68 101 aa6.88□□□□□ -1.31
PSEN1-204ENST00000394164 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
PSEN1-204ENST00000394164 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
PSEN1-204ENST00000394164 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
PSEN1-204ENST00000394164 TRBV6-4A0A1B0GX49 114 aa6.87□□□□□ -1.31
PSEN1-204ENST00000394164 CMC4P56277 68 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-204ENST00000394164 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
PSEN1-204ENST00000394164 Q8N814 137 aa6.86□□□□□ -1.31
PSEN1-204ENST00000394164 LAMTOR3Q9UHA4 124 aa6.86□□□□□ -1.31
PSEN1-204ENST00000394164 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
PSEN1-204ENST00000394164 TRBV7-6A0A0J9YX20 115 aa6.85□□□□□ -1.31
PSEN1-204ENST00000394164 TRAV7A0A075B6U4 112 aa6.85□□□□□ -1.31
PSEN1-204ENST00000394164 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
PSEN1-204ENST00000394164 TM2D3Q9BRN9 247 aa6.84□□□□□ -1.31
PSEN1-204ENST00000394164 SMIM26A0A096LP01 95 aa6.84□□□□□ -1.31
PSEN1-204ENST00000394164 X6R8D5 127 aa6.84□□□□□ -1.31
PSEN1-204ENST00000394164 LINC01547P58512 204 aaPredicted RBP6.84□□□□□ -1.32
PSEN1-204ENST00000394164 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.32
PSEN1-204ENST00000394164 ATP5EP2Q5VTU8 51 aa6.84□□□□□ -1.32
PSEN1-204ENST00000394164 TMEM256-PLSCR3K7ERE1 68 aa6.83□□□□□ -1.32
PSEN1-204ENST00000394164 IBA57-AS1B1ANH7 110 aa6.83□□□□□ -1.32
PSEN1-204ENST00000394164 FAM19A3Q7Z5A8 133 aa6.83□□□□□ -1.32
PSEN1-204ENST00000394164 C6orf99Q4VX62 202 aa6.82□□□□□ -1.32
PSEN1-204ENST00000394164 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
PSEN1-204ENST00000394164 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-204ENST00000394164 C1orf195Q5TG92 126 aa6.82□□□□□ -1.32
PSEN1-204ENST00000394164 CELA1Q9UNI1 258 aa6.82□□□□□ -1.32
PSEN1-204ENST00000394164 TENM3Q9P273 2699 aa6.82□□□□□ -1.32
PSEN1-204ENST00000394164 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
PSEN1-204ENST00000394164 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
PSEN1-204ENST00000394164 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
PSEN1-204ENST00000394164 Q6ZVQ6 151 aa6.81□□□□□ -1.32
PSEN1-204ENST00000394164 IGHV3OR16-9A0A0B4J2B5 98 aa6.81□□□□□ -1.32
PSEN1-204ENST00000394164 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
PSEN1-204ENST00000394164 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
PSEN1-204ENST00000394164 ANGP03950 147 aaKnown RBP6.8□□□□□ -1.32
PSEN1-204ENST00000394164 DAD1P61803 113 aa6.8□□□□□ -1.32
PSEN1-204ENST00000394164 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
PSEN1-204ENST00000394164 Q8N9L7 120 aa6.8□□□□□ -1.32
PSEN1-204ENST00000394164 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 SEC61GP60059 68 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 PRO0255Q9UI72 69 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 NBEAL1Q6ZS30 2694 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 Q6ZQT0 140 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 V9GYY9 64 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
PSEN1-204ENST00000394164 F8WDY8 70 aa6.78□□□□□ -1.32
PSEN1-204ENST00000394164 MIFP14174 115 aa6.78□□□□□ -1.32
PSEN1-204ENST00000394164 OXLD1Q5BKU9 147 aa6.78□□□□□ -1.32
PSEN1-204ENST00000394164 Q8NDZ9 215 aa6.78□□□□□ -1.32
PSEN1-204ENST00000394164 RETNQ9HD89 108 aa6.78□□□□□ -1.32
PSEN1-204ENST00000394164 A0A087WZ39 114 aa6.77□□□□□ -1.33
PSEN1-204ENST00000394164 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
PSEN1-204ENST00000394164 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
PSEN1-204ENST00000394164 ANK2Q01484 3957 aa6.76□□□□□ -1.33
PSEN1-204ENST00000394164 IGHV4-30-4P0DP06 118 aa6.75□□□□□ -1.33
PSEN1-204ENST00000394164 NREPQ16612 68 aa6.75□□□□□ -1.33
PSEN1-204ENST00000394164 Q6ZQY7 126 aa6.75□□□□□ -1.33
PSEN1-204ENST00000394164 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 CHCHD10Q8WYQ3 142 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-204ENST00000394164 PRB2P02812 416 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-204ENST00000394164 REG3AQ06141 175 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 APOC4P55056 127 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-204ENST00000394164 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 KLK12Q9UKR0 248 aa6.74□□□□□ -1.33
PSEN1-204ENST00000394164 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
PSEN1-204ENST00000394164 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
PSEN1-204ENST00000394164 LINC00612Q8N6U2 182 aa6.73□□□□□ -1.33
PSEN1-204ENST00000394164 BPY2O14599 106 aa6.72□□□□□ -1.33
PSEN1-204ENST00000394164 Q8NAQ8 132 aa6.72□□□□□ -1.33
PSEN1-204ENST00000394164 LYRM9A8MSI8 78 aa6.71□□□□□ -1.33
PSEN1-204ENST00000394164 MGAM2Q2M2H8 2515 aa6.71□□□□□ -1.34
PSEN1-204ENST00000394164 SPART-AS1P0CW21 52 aa6.71□□□□□ -1.34
PSEN1-204ENST00000394164 C10orf25Q5T742 122 aa6.71□□□□□ -1.34
PSEN1-204ENST00000394164 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
PSEN1-204ENST00000394164 MUC7Q8TAX7 377 aa6.7□□□□□ -1.34
PSEN1-204ENST00000394164 A0A1B0GUV1 79 aa6.7□□□□□ -1.34
PSEN1-204ENST00000394164 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
PSEN1-204ENST00000394164 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
PSEN1-204ENST00000394164 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms