RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ARHGAP32A7KAX9 2087 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 DSCAML1Q8TD84 2053 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 CLPSL1A2RUU4 121 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 M0R3E3 92 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 CCL3P10147 92 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
PTPRC-205ENST00000391970 ENHOQ6UWT2 76 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 C20orf166-AS1Q96NR2 134 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 C14orf132Q9NPU4 83 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 PIEZO1Q92508 2521 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 VWFP04275 2813 aa1.38□□□□□ -2.19
PTPRC-205ENST00000391970 ANKHD1Q8IWZ3 2542 aaKnown RBP1.37□□□□□ -2.19
PTPRC-205ENST00000391970 IGHV3-73A0A0B4J1V6 119 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 TRAV10A0A0B4J240 114 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-205ENST00000391970 H3BRN7 92 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 H3BSH0 61 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 CHKB-CPT1BH3BT56 60 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 MSMBP08118 114 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 FAM27BQ5VT28 67 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 KRTAP26-1Q6PEX3 210 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-205ENST00000391970 LINC00308Q8TCZ7 52 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 COX14Q96I36 57 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 PCNTO95613 3336 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 TRIOBPQ9H2D6 2365 aa1.37□□□□□ -2.19
PTPRC-205ENST00000391970 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
PTPRC-205ENST00000391970 TRAV21A0A0B4J279 112 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 B4DSR2 109 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 KLK9Q2XQG4 91 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 LINC00208Q96KT6 92 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 ORMDL1Q9P0S3 153 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 KNTC1P50748 2209 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 STAB1Q9NY15 2570 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 NCOR1O75376 2440 aa1.36□□□□□ -2.19
PTPRC-205ENST00000391970 CACNA1CQ13936 2221 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TRAV12-3A0A0B4J271 114 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TRBV10-1A0A0K0K1A3 114 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 PI4KAP42356 2102 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 ESPL1Q14674 2120 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 C9orf163Q8N9P6 203 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TMEM167AQ8TBQ9 72 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 COX7B2Q8TF08 81 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 SPRR4Q96PI1 79 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TTTY12Q9BZ98 90 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TIMM8BQ9Y5J9 83 aaPredicted RBP1.35□□□□□ -2.19
PTPRC-205ENST00000391970 MUC4Q99102 2169 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 SPTBN4Q9H254 2564 aa1.35□□□□□ -2.19
PTPRC-205ENST00000391970 TNRC18O15417 2968 aaPredicted RBP1.35□□□□□ -2.19
PTPRC-205ENST00000391970 CENPFP49454 3210 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 NCOR2Q9Y618 2525 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 ALPK2Q86TB3 2170 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 IGHV3-15A0A0B4J1V0 119 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 H7C2G1 150 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 CRPP02741 224 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 SPATA8Q6RVD6 105 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 CNEP1R1Q8N9A8 125 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
PTPRC-205ENST00000391970 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.2
PTPRC-205ENST00000391970 MALRD1Q5VYJ5 2156 aa1.34□□□□□ -2.2
PTPRC-205ENST00000391970 CADP27708 2225 aa1.34□□□□□ -2.2
PTPRC-205ENST00000391970 UNC13CQ8NB66 2214 aa1.34□□□□□ -2.2
PTPRC-205ENST00000391970 ALMS1Q8TCU4 4167 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 ASH1LQ9NR48 2969 aaKnown RBP1.33□□□□□ -2.2
PTPRC-205ENST00000391970 TRGV2A0A075B6R0 118 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-205ENST00000391970 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 NCR3O14931 201 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 WT1-ASQ06250 92 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 C1orf134Q5TEV5 83 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 WFDC9Q8NEX5 89 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 SMIM11BQ8TCY0 68 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 PDE4DIPQ5VU43 2346 aa1.33□□□□□ -2.2
PTPRC-205ENST00000391970 SPAG17Q6Q759 2223 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
PTPRC-205ENST00000391970 A0A096LNT2 108 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 H0Y9P7 68 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 NDUFA4O00483 81 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 COX7BP24311 80 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 CCL18P55774 89 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 ERHP84090 104 aaKnown RBP1.32□□□□□ -2.2
PTPRC-205ENST00000391970 Q6ZS52 159 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 CCL26Q9Y258 94 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 FAM215AQ9Y5M1 114 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 CCDC168Q8NDH2 2452 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 CFAP54Q96N23 3096 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 CR1P17927 2039 aa1.32□□□□□ -2.2
PTPRC-205ENST00000391970 GCN1Q92616 2671 aaKnown RBP1.32□□□□□ -2.2
PTPRC-205ENST00000391970 ODF3BA8MYP8 253 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 I3L2K1 104 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 NNATQ16517 81 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 SPINK9Q5DT21 86 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 Q6ZTI0 123 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 RPL39LQ96EH5 51 aaKnown RBP1.31□□□□□ -2.2
PTPRC-205ENST00000391970 PSORS1C2Q9UIG4 136 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 MINOS1-NBL1R4GNA1 71 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms