RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
ALK-201ENST00000389048 TYMSOSQ8TAI1 123 aa10.64□□□□□ -0.71
ALK-201ENST00000389048 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
ALK-201ENST00000389048 ELOF1P60002 83 aaKnown RBP10.64□□□□□ -0.71
ALK-201ENST00000389048 NAV3Q8IVL0 2385 aa10.64□□□□□ -0.71
ALK-201ENST00000389048 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
ALK-201ENST00000389048 A8MUN3 132 aa10.63□□□□□ -0.71
ALK-201ENST00000389048 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
ALK-201ENST00000389048 RTL8CO15255 209 aa10.63□□□□□ -0.71
ALK-201ENST00000389048 LINC00315P59091 139 aa10.62□□□□□ -0.71
ALK-201ENST00000389048 TP53AIP1Q9HCN2 124 aa10.62□□□□□ -0.71
ALK-201ENST00000389048 ANKHD1Q8IWZ3 2542 aaKnown RBP10.62□□□□□ -0.71
ALK-201ENST00000389048 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
ALK-201ENST00000389048 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
ALK-201ENST00000389048 TRAV22A0A0B4J277 110 aa10.58□□□□□ -0.72
ALK-201ENST00000389048 Q6ZRX8 168 aa10.58□□□□□ -0.72
ALK-201ENST00000389048 K7EQZ3 153 aa10.56□□□□□ -0.72
ALK-201ENST00000389048 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
ALK-201ENST00000389048 A0A0G2JQZ4 141 aa10.55□□□□□ -0.72
ALK-201ENST00000389048 A0A1W2PNN7 141 aa10.55□□□□□ -0.72
ALK-201ENST00000389048 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
ALK-201ENST00000389048 Q8NBF4 154 aa10.55□□□□□ -0.72
ALK-201ENST00000389048 ACACBO00763 2458 aa10.54□□□□□ -0.72
ALK-201ENST00000389048 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
ALK-201ENST00000389048 TRBV7-4A0A0J9YYF1 115 aa10.54□□□□□ -0.72
ALK-201ENST00000389048 C16orf90A8MZG2 172 aa10.53□□□□□ -0.72
ALK-201ENST00000389048 COA5Q86WW8 74 aa10.53□□□□□ -0.72
ALK-201ENST00000389048 Q6ZRP5 223 aa10.53□□□□□ -0.72
ALK-201ENST00000389048 DSCR10P59022 87 aa10.52□□□□□ -0.72
ALK-201ENST00000389048 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
ALK-201ENST00000389048 C2CD3Q4AC94 2353 aa10.51□□□□□ -0.73
ALK-201ENST00000389048 IGLV6-57P01721 117 aa10.5□□□□□ -0.73
ALK-201ENST00000389048 LINC00588Q9Y4M8 146 aa10.5□□□□□ -0.73
ALK-201ENST00000389048 LOC110117498A0A087WWA1 95 aa10.49□□□□□ -0.73
ALK-201ENST00000389048 ABCA2Q9BZC7 2435 aa10.47□□□□□ -0.73
ALK-201ENST00000389048 PTPRBP23467 1997 aa10.46□□□□□ -0.73
ALK-201ENST00000389048 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
ALK-201ENST00000389048 COL27A1Q8IZC6 1860 aaPredicted RBP10.45□□□□□ -0.74
ALK-201ENST00000389048 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
ALK-201ENST00000389048 IGLV5-45A0A087WSX0 123 aa10.45□□□□□ -0.74
ALK-201ENST00000389048 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
ALK-201ENST00000389048 BCE1O60756 84 aa10.44□□□□□ -0.74
ALK-201ENST00000389048 A8MWP4 228 aa10.43□□□□□ -0.74
ALK-201ENST00000389048 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
ALK-201ENST00000389048 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
ALK-201ENST00000389048 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
ALK-201ENST00000389048 A0A0D9SG42 100 aa10.42□□□□□ -0.74
ALK-201ENST00000389048 ANAPC11Q9NYG5 84 aa10.42□□□□□ -0.74
ALK-201ENST00000389048 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
ALK-201ENST00000389048 J3QL48 77 aa10.41□□□□□ -0.74
ALK-201ENST00000389048 H3BPC8 53 aa10.39□□□□□ -0.75
ALK-201ENST00000389048 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
ALK-201ENST00000389048 PIEZO2Q9H5I5 2752 aa10.39□□□□□ -0.75
ALK-201ENST00000389048 C9orf129Q5T035 196 aaKnown RBP10.39□□□□□ -0.75
ALK-201ENST00000389048 CRIPTQ9P021 101 aa10.39□□□□□ -0.75
ALK-201ENST00000389048 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
ALK-201ENST00000389048 Q8NAQ8 132 aa10.37□□□□□ -0.75
ALK-201ENST00000389048 LITAFQ99732 161 aa10.37□□□□□ -0.75
ALK-201ENST00000389048 LOC101927531A0A1B0GV80 90 aa10.37□□□□□ -0.75
ALK-201ENST00000389048 DOPEY1Q5JWR5 2465 aa10.36□□□□□ -0.75
ALK-201ENST00000389048 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
ALK-201ENST00000389048 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
ALK-201ENST00000389048 CACNA1AO00555 2505 aa10.35□□□□□ -0.75
ALK-201ENST00000389048 UQCR11O14957 56 aa10.35□□□□□ -0.75
ALK-201ENST00000389048 GVQW2A0A096LPI5 108 aaPredicted RBP10.35□□□□□ -0.75
ALK-201ENST00000389048 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
ALK-201ENST00000389048 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
ALK-201ENST00000389048 CCDC168Q8NDH2 2452 aa10.33□□□□□ -0.76
ALK-201ENST00000389048 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
ALK-201ENST00000389048 CD164Q04900 197 aa10.32□□□□□ -0.76
ALK-201ENST00000389048 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
ALK-201ENST00000389048 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
ALK-201ENST00000389048 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
ALK-201ENST00000389048 C8orf17Q9NRJ1 99 aa10.29□□□□□ -0.76
ALK-201ENST00000389048 C15orf56Q8N910 161 aa10.29□□□□□ -0.76
ALK-201ENST00000389048 H3BNG1 76 aa10.28□□□□□ -0.76
ALK-201ENST00000389048 Q8N1X5 172 aa10.27□□□□□ -0.76
ALK-201ENST00000389048 A0A1B0GW54 56 aa10.27□□□□□ -0.77
ALK-201ENST00000389048 IGF2RP11717 2491 aa10.27□□□□□ -0.77
ALK-201ENST00000389048 PRR15Q8IV56 129 aa10.26□□□□□ -0.77
ALK-201ENST00000389048 C10orf142B7Z368 130 aa10.25□□□□□ -0.77
ALK-201ENST00000389048 LCA10Q71F78 164 aa10.24□□□□□ -0.77
ALK-201ENST00000389048 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
ALK-201ENST00000389048 IGLV5-37A0A075B6J1 123 aa10.22□□□□□ -0.77
ALK-201ENST00000389048 KRTAP10-11P60412 298 aa10.22□□□□□ -0.77
ALK-201ENST00000389048 Q8N377 158 aa10.22□□□□□ -0.77
ALK-201ENST00000389048 H7BZZ5 65 aa10.22□□□□□ -0.77
ALK-201ENST00000389048 A0A1B0GVX0 72 aa10.21□□□□□ -0.77
ALK-201ENST00000389048 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
ALK-201ENST00000389048 MYO18BQ8IUG5 2567 aa10.2□□□□□ -0.78
ALK-201ENST00000389048 ERC2-IT1O76042 136 aa10.19□□□□□ -0.78
ALK-201ENST00000389048 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
ALK-201ENST00000389048 COL4A2P08572 1712 aa10.19□□□□□ -0.78
ALK-201ENST00000389048 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
ALK-201ENST00000389048 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
ALK-201ENST00000389048 PIEZO1Q92508 2521 aa10.16□□□□□ -0.78
ALK-201ENST00000389048 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
ALK-201ENST00000389048 KLKP1Q107X0 134 aa10.15□□□□□ -0.78
ALK-201ENST00000389048 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
ALK-201ENST00000389048 WWC2-AS2Q96NR7 200 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms