RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 SPTY2D1-AS1A0A0U1RR47 76 aa0.28□□□□□ -2.36
RNU6-140P-201ENST00000384566 CPSF4LA6NMK7 179 aaKnown RBP0.28□□□□□ -2.36
RNU6-140P-201ENST00000384566 ACYP1P07311 99 aa0.28□□□□□ -2.36
RNU6-140P-201ENST00000384566 DEFB105AQ8NG35 78 aa0.28□□□□□ -2.36
RNU6-140P-201ENST00000384566 FXYD6Q9H0Q3 95 aa0.28□□□□□ -2.36
RNU6-140P-201ENST00000384566 SCRIBQ14160 1630 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 SPINK4O60575 86 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 TDRG1Q3Y452 100 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 NAV2Q8IVL1 2488 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 LRRC7Q96NW7 1537 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 RGPD1P0DJD0 1748 aa0.27□□□□□ -2.37
RNU6-140P-201ENST00000384566 PKDREJQ9NTG1 2253 aa0.26□□□□□ -2.37
RNU6-140P-201ENST00000384566 KANTRA0A1W2PQU2 76 aa0.26□□□□□ -2.37
RNU6-140P-201ENST00000384566 RGPD2P0DJD1 1756 aa0.26□□□□□ -2.37
RNU6-140P-201ENST00000384566 URB1O60287 2271 aaKnown RBP0.26□□□□□ -2.37
RNU6-140P-201ENST00000384566 CHD9Q3L8U1 2897 aa0.26□□□□□ -2.37
RNU6-140P-201ENST00000384566 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
RNU6-140P-201ENST00000384566 UBR3Q6ZT12 1888 aa0.25□□□□□ -2.37
RNU6-140P-201ENST00000384566 BCORQ6W2J9 1755 aa0.25□□□□□ -2.37
RNU6-140P-201ENST00000384566 CEBPZOSA8MTT3 80 aa0.25□□□□□ -2.37
RNU6-140P-201ENST00000384566 APLNQ9ULZ1 77 aa0.25□□□□□ -2.37
RNU6-140P-201ENST00000384566 IGF2RP11717 2491 aa0.24□□□□□ -2.37
RNU6-140P-201ENST00000384566 CCL22O00626 93 aa0.24□□□□□ -2.37
RNU6-140P-201ENST00000384566 COX7BP24311 80 aa0.24□□□□□ -2.37
RNU6-140P-201ENST00000384566 MRPL34Q9BQ48 92 aaKnown RBP0.24□□□□□ -2.37
RNU6-140P-201ENST00000384566 OTOGQ6ZRI0 2925 aa0.24□□□□□ -2.37
RNU6-140P-201ENST00000384566 ZNF292O60281 2723 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 ARHGAP35Q9NRY4 1499 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 CLIP1P30622 1438 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 ZFYVE26Q68DK2 2539 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 AKAP6Q13023 2319 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 S100A13Q99584 98 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 ST20Q9HBF5 79 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 DIP2BQ9P265 1576 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 DCAF1Q9Y4B6 1507 aa0.23□□□□□ -2.37
RNU6-140P-201ENST00000384566 LTN1O94822 1766 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 PREX1Q8TCU6 1659 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 RPL38P63173 70 aaKnown RBP0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 ADIRFQ15847 76 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 KLK9Q2XQG4 91 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 GAFA1Q96PS6 74 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 URB2Q14146 1524 aaKnown RBP0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 ERVK-7P63135 1459 aa0.22□□□□□ -2.37
RNU6-140P-201ENST00000384566 POLR1AO95602 1720 aaPredicted RBP0.21□□□□□ -2.38
RNU6-140P-201ENST00000384566 TIAM2Q8IVF5 1701 aa0.21□□□□□ -2.38
RNU6-140P-201ENST00000384566 ANKRD17O75179 2603 aaKnown RBP0.21□□□□□ -2.38
RNU6-140P-201ENST00000384566 PIEZO2Q9H5I5 2752 aa0.21□□□□□ -2.38
RNU6-140P-201ENST00000384566 HUWE1Q7Z6Z7 4374 aaKnown RBP0.21□□□□□ -2.38
RNU6-140P-201ENST00000384566 NCOR2Q9Y618 2525 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 TRAV21A0A0B4J279 112 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 NDUFB1O75438 58 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 H1FX-AS1Q4G0G2 97 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 WFDC9Q8NEX5 89 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 SPTBN1Q01082 2364 aaKnown RBP0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 USP32Q8NFA0 1604 aa0.2□□□□□ -2.38
RNU6-140P-201ENST00000384566 RGPD8O14715 1765 aaPredicted RBP0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 RGPD5Q99666 1765 aa0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 KDM5DQ9BY66 1539 aa0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 MUC5BQ9HC84 5762 aaPredicted RBP0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 PIK3C2BO00750 1634 aa0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 CEP170BQ9Y4F5 1589 aaPredicted RBP0.19□□□□□ -2.38
RNU6-140P-201ENST00000384566 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
RNU6-140P-201ENST00000384566 MAGI3Q5TCQ9 1506 aa0.18□□□□□ -2.38
RNU6-140P-201ENST00000384566 FAT2Q9NYQ8 4349 aa0.18□□□□□ -2.38
RNU6-140P-201ENST00000384566 PRM1P04553 51 aa0.18□□□□□ -2.38
RNU6-140P-201ENST00000384566 ZNF831Q5JPB2 1677 aa0.18□□□□□ -2.38
RNU6-140P-201ENST00000384566 MYCBP2O75592 4640 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 NCOA2Q15596 1464 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 LOC730098B7Z3J9 87 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 HEPN1Q6WQI6 88 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 UNC79Q9P2D8 2635 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 CDKN2A-AS1Q9UH64 79 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 HRNRQ86YZ3 2850 aaPredicted RBP0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 ABCC1P33527 1531 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 VWFP04275 2813 aa0.17□□□□□ -2.38
RNU6-140P-201ENST00000384566 DOT1LQ8TEK3 1739 aa0.16□□□□□ -2.38
RNU6-140P-201ENST00000384566 CFAP74Q9C0B2 1584 aa0.16□□□□□ -2.38
RNU6-140P-201ENST00000384566 TENM4Q6N022 2769 aa0.16□□□□□ -2.38
RNU6-140P-201ENST00000384566 ATP5EP2Q5VTU8 51 aa0.16□□□□□ -2.38
RNU6-140P-201ENST00000384566 BSNQ9UPA5 3926 aa0.16□□□□□ -2.38
RNU6-140P-201ENST00000384566 NCOR1O75376 2440 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 HIVEP3Q5T1R4 2406 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 LPAP08519 4548 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 ARFGEF2Q9Y6D5 1785 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 H3BUT2 72 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 NWD1Q149M9 1564 aa0.15□□□□□ -2.39
RNU6-140P-201ENST00000384566 TNRC6CQ9HCJ0 1690 aaKnown RBP0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 MAST4O15021 2626 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 SPRR2DP22532 72 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 DEFB121Q5J5C9 76 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 BVES-AS1Q5T3Y7 98 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 LELP1Q5T871 98 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 COX6B2Q6YFQ2 88 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 CCDC88BA6NC98 1476 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
RNU6-140P-201ENST00000384566 RRBP1Q9P2E9 1410 aaKnown RBP0.13□□□□□ -2.39
RNU6-140P-201ENST00000384566 NESP48681 1621 aa0.13□□□□□ -2.39
RNU6-140P-201ENST00000384566 PTPN23Q9H3S7 1636 aa0.13□□□□□ -2.39
RNU6-140P-201ENST00000384566 CSPG4Q6UVK1 2322 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms