RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 TRAV22A0A0B4J277 110 aa14.2□□□□□ -0.14
NKX3-2-201ENST00000382438 COX17Q14061 63 aa14.19□□□□□ -0.14
NKX3-2-201ENST00000382438 MXRA5Q9NR99 2828 aa14.19□□□□□ -0.14
NKX3-2-201ENST00000382438 C3orf84H3BNL1 204 aa14.19□□□□□ -0.14
NKX3-2-201ENST00000382438 KLK12Q9UKR0 248 aa14.19□□□□□ -0.14
NKX3-2-201ENST00000382438 IGHV4-31P0DP07 118 aa14.18□□□□□ -0.14
NKX3-2-201ENST00000382438 CD164Q04900 197 aa14.18□□□□□ -0.14
NKX3-2-201ENST00000382438 FBN2P35556 2912 aa14.18□□□□□ -0.14
NKX3-2-201ENST00000382438 NCOR2Q9Y618 2525 aa14.18□□□□□ -0.14
NKX3-2-201ENST00000382438 APCP25054 2843 aa14.18□□□□□ -0.14
NKX3-2-201ENST00000382438 USP9YO00507 2555 aaPredicted RBP14.17□□□□□ -0.14
NKX3-2-201ENST00000382438 SMIM29Q86T20 159 aa14.17□□□□□ -0.14
NKX3-2-201ENST00000382438 CHD8Q9HCK8 2581 aa14.16□□□□□ -0.14
NKX3-2-201ENST00000382438 MSMBP08118 114 aa14.16□□□□□ -0.14
NKX3-2-201ENST00000382438 IGHV4-30-2A0A087WSY4 118 aa14.15□□□□□ -0.14
NKX3-2-201ENST00000382438 IGLV6-57P01721 117 aa14.15□□□□□ -0.14
NKX3-2-201ENST00000382438 COX7BP24311 80 aa14.15□□□□□ -0.14
NKX3-2-201ENST00000382438 UNQ6190/PRO20217Q6UXQ8 127 aa14.15□□□□□ -0.14
NKX3-2-201ENST00000382438 A8MUN3 132 aa14.14□□□□□ -0.15
NKX3-2-201ENST00000382438 NBEAL2Q6ZNJ1 2754 aa14.14□□□□□ -0.15
NKX3-2-201ENST00000382438 DIRC1Q969H9 104 aa14.12□□□□□ -0.15
NKX3-2-201ENST00000382438 SONP18583 2426 aaKnown RBP14.12□□□□□ -0.15
NKX3-2-201ENST00000382438 SETXQ7Z333 2677 aaKnown RBP14.12□□□□□ -0.15
NKX3-2-201ENST00000382438 ZNF702PQ9H963 129 aa14.11□□□□□ -0.15
NKX3-2-201ENST00000382438 CHCHD10Q8WYQ3 142 aaPredicted RBP14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 WFDC10AQ9H1F0 79 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 PTPN13Q12923 2485 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 SPTBN4Q9H254 2564 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 SETD2Q9BYW2 2564 aaPredicted RBP14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 XAGE1AQ9HD64 81 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 IGHV4-28A0A0C4DH34 117 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 DEFB130BP0DP73 79 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 DEFB130AP0DP74 79 aa14.1□□□□□ -0.15
NKX3-2-201ENST00000382438 ZFYVE26Q68DK2 2539 aa14.09□□□□□ -0.15
NKX3-2-201ENST00000382438 GIG44P09565 113 aaPredicted RBP14.09□□□□□ -0.15
NKX3-2-201ENST00000382438 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
NKX3-2-201ENST00000382438 GYPEP15421 78 aa14.07□□□□□ -0.16
NKX3-2-201ENST00000382438 ZNF73O43830 326 aaPredicted RBP14.07□□□□□ -0.16
NKX3-2-201ENST00000382438 C16orf74Q96GX8 76 aa14.07□□□□□ -0.16
NKX3-2-201ENST00000382438 SYCNQ0VAF6 134 aa14.06□□□□□ -0.16
NKX3-2-201ENST00000382438 B4DSR2 109 aa14.05□□□□□ -0.16
NKX3-2-201ENST00000382438 H3BQ85 93 aa14.05□□□□□ -0.16
NKX3-2-201ENST00000382438 HIGD2BQ4VC39 106 aa14.05□□□□□ -0.16
NKX3-2-201ENST00000382438 MRPL55Q7Z7F7 128 aaKnown RBP14.04□□□□□ -0.16
NKX3-2-201ENST00000382438 A0A1B0GUV1 79 aa14.04□□□□□ -0.16
NKX3-2-201ENST00000382438 ANGP03950 147 aaKnown RBP14.03□□□□□ -0.16
NKX3-2-201ENST00000382438 MAPK1IP1LQ8NDC0 245 aa14.02□□□□□ -0.16
NKX3-2-201ENST00000382438 CYSRT1A8MQ03 144 aa14.01□□□□□ -0.17
NKX3-2-201ENST00000382438 PSCAO43653 123 aa14.01□□□□□ -0.17
NKX3-2-201ENST00000382438 SPAG11BQ08648 103 aa14□□□□□ -0.17
NKX3-2-201ENST00000382438 ELOF1P60002 83 aaKnown RBP14□□□□□ -0.17
NKX3-2-201ENST00000382438 RBM12B-AS1Q9P1G2 102 aa14□□□□□ -0.17
NKX3-2-201ENST00000382438 EPG5Q9HCE0 2579 aa13.99□□□□□ -0.17
NKX3-2-201ENST00000382438 CCL24O00175 119 aa13.98□□□□□ -0.17
NKX3-2-201ENST00000382438 REG3AQ06141 175 aa13.98□□□□□ -0.17
NKX3-2-201ENST00000382438 SPTSSBQ8NFR3 76 aa13.98□□□□□ -0.17
NKX3-2-201ENST00000382438 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 Q5VV11 94 aa13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 CCL19Q99731 98 aa13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 IGHV4-30-4P0DP06 118 aa13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 DEFB105AQ8NG35 78 aa13.97□□□□□ -0.17
NKX3-2-201ENST00000382438 ZCCHC13Q8WW36 166 aaKnown RBP13.96□□□□□ -0.17
NKX3-2-201ENST00000382438 C4orf3Q8WVX3 66 aa13.95□□□□□ -0.18
NKX3-2-201ENST00000382438 GCN1Q92616 2671 aaKnown RBP13.95□□□□□ -0.18
NKX3-2-201ENST00000382438 PIEZO1Q92508 2521 aa13.95□□□□□ -0.18
NKX3-2-201ENST00000382438 POLQO75417 2590 aa13.94□□□□□ -0.18
NKX3-2-201ENST00000382438 LCE6AA0A183 80 aa13.94□□□□□ -0.18
NKX3-2-201ENST00000382438 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
NKX3-2-201ENST00000382438 NF1P21359 2839 aa13.94□□□□□ -0.18
NKX3-2-201ENST00000382438 CHKB-CPT1BH3BT56 60 aa13.94□□□□□ -0.18
NKX3-2-201ENST00000382438 LINC00588Q9Y4M8 146 aa13.93□□□□□ -0.18
NKX3-2-201ENST00000382438 UTP20O75691 2785 aaKnown RBP13.93□□□□□ -0.18
NKX3-2-201ENST00000382438 TEX15Q9BXT5 2789 aa13.93□□□□□ -0.18
NKX3-2-201ENST00000382438 CSNK1G2-AS1Q8NCQ2 148 aa13.92□□□□□ -0.18
NKX3-2-201ENST00000382438 ESM1Q9NQ30 184 aa13.92□□□□□ -0.18
NKX3-2-201ENST00000382438 C16orf90A8MZG2 172 aa13.91□□□□□ -0.18
NKX3-2-201ENST00000382438 KTN1-AS1Q86SY8 53 aa13.91□□□□□ -0.18
NKX3-2-201ENST00000382438 UBE2BP63146 152 aa13.9□□□□□ -0.18
NKX3-2-201ENST00000382438 ETDCA0A1B0GVM5 59 aa13.9□□□□□ -0.18
NKX3-2-201ENST00000382438 A0A0J9YWU9 116 aa13.89□□□□□ -0.19
NKX3-2-201ENST00000382438 CENPEQ02224 2701 aa13.88□□□□□ -0.19
NKX3-2-201ENST00000382438 CYP4F30PQ9H0H9 118 aa13.88□□□□□ -0.19
NKX3-2-201ENST00000382438 C6orf48Q9UBA6 75 aa13.87□□□□□ -0.19
NKX3-2-201ENST00000382438 LINC00528Q8N1L1 170 aa13.87□□□□□ -0.19
NKX3-2-201ENST00000382438 NAV2Q8IVL1 2488 aa13.87□□□□□ -0.19
NKX3-2-201ENST00000382438 Q6YL49 198 aa13.86□□□□□ -0.19
NKX3-2-201ENST00000382438 LRRK2Q5S007 2527 aa13.85□□□□□ -0.19
NKX3-2-201ENST00000382438 M0R378 163 aa13.85□□□□□ -0.19
NKX3-2-201ENST00000382438 FLNCQ14315 2725 aa13.84□□□□□ -0.19
NKX3-2-201ENST00000382438 K7EQZ3 153 aa13.84□□□□□ -0.19
NKX3-2-201ENST00000382438 DEFB116Q30KQ4 102 aa13.84□□□□□ -0.19
NKX3-2-201ENST00000382438 HCG22E2RYF7 251 aa13.83□□□□□ -0.2
NKX3-2-201ENST00000382438 KPRPQ5T749 579 aaPredicted RBP13.83□□□□□ -0.2
NKX3-2-201ENST00000382438 PRR15LQ9BU68 103 aa13.82□□□□□ -0.2
NKX3-2-201ENST00000382438 UBE2AP49459 152 aa13.82□□□□□ -0.2
NKX3-2-201ENST00000382438 VPREB1P12018 145 aa13.81□□□□□ -0.2
NKX3-2-201ENST00000382438 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
NKX3-2-201ENST00000382438 DSCR10P59022 87 aa13.8□□□□□ -0.2
NKX3-2-201ENST00000382438 PRO0255Q9UI72 69 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms