RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 PRO0628Q9UI54 55 aa8.39□□□□□ -1.07
HERC6-203ENST00000380265 SMIM26A0A096LP01 95 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
HERC6-203ENST00000380265 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
HERC6-203ENST00000380265 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
HERC6-203ENST00000380265 LYPD5Q6UWN5 251 aa8.37□□□□□ -1.07
HERC6-203ENST00000380265 NBEAL2Q6ZNJ1 2754 aa8.36□□□□□ -1.07
HERC6-203ENST00000380265 DAD1P61803 113 aa8.36□□□□□ -1.07
HERC6-203ENST00000380265 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
HERC6-203ENST00000380265 GIG44P09565 113 aaPredicted RBP8.36□□□□□ -1.07
HERC6-203ENST00000380265 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
HERC6-203ENST00000380265 C6orf223Q8N319 242 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 SPATA3Q8NHX4 192 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 MIFP14174 115 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 KLKP1Q107X0 134 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 Q8N9L7 120 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
HERC6-203ENST00000380265 Q8NDZ9 215 aa8.34□□□□□ -1.07
HERC6-203ENST00000380265 COL6A5A8TX70 2615 aa8.34□□□□□ -1.07
HERC6-203ENST00000380265 ITPR2Q14571 2701 aa8.34□□□□□ -1.07
HERC6-203ENST00000380265 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
HERC6-203ENST00000380265 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
HERC6-203ENST00000380265 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
HERC6-203ENST00000380265 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.08
HERC6-203ENST00000380265 IGHV4-31P0DP07 118 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 REG3AQ06141 175 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 DEFB4AO15263 64 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 NREPQ16612 68 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 MUC7Q8TAX7 377 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 COX17Q14061 63 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 C10orf25Q5T742 122 aa8.33□□□□□ -1.08
HERC6-203ENST00000380265 HTN3P15516 51 aa8.32□□□□□ -1.08
HERC6-203ENST00000380265 FP248Q71RG6 208 aaPredicted RBP8.32□□□□□ -1.08
HERC6-203ENST00000380265 UTP20O75691 2785 aaKnown RBP8.32□□□□□ -1.08
HERC6-203ENST00000380265 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
HERC6-203ENST00000380265 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
HERC6-203ENST00000380265 PDE6GP18545 87 aa8.31□□□□□ -1.08
HERC6-203ENST00000380265 BPY2O14599 106 aa8.31□□□□□ -1.08
HERC6-203ENST00000380265 KIAA0087Q14695 138 aa8.31□□□□□ -1.08
HERC6-203ENST00000380265 CMC4P56277 68 aaPredicted RBP8.31□□□□□ -1.08
HERC6-203ENST00000380265 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
HERC6-203ENST00000380265 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
HERC6-203ENST00000380265 NF1P21359 2839 aa8.3□□□□□ -1.08
HERC6-203ENST00000380265 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
HERC6-203ENST00000380265 CXCL6P80162 114 aa8.3□□□□□ -1.08
HERC6-203ENST00000380265 NIPBLQ6KC79 2804 aaeCLIP8.29□□□□□ -1.08
HERC6-203ENST00000380265 NDUFC1O43677 76 aa8.29□□□□□ -1.08
HERC6-203ENST00000380265 BCE1O60756 84 aa8.29□□□□□ -1.08
HERC6-203ENST00000380265 CYSRT1A8MQ03 144 aa8.28□□□□□ -1.08
HERC6-203ENST00000380265 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
HERC6-203ENST00000380265 COX7BP24311 80 aa8.28□□□□□ -1.08
HERC6-203ENST00000380265 SEC61GP60059 68 aa8.27□□□□□ -1.09
HERC6-203ENST00000380265 C3orf84H3BNL1 204 aa8.26□□□□□ -1.09
HERC6-203ENST00000380265 KLK12Q9UKR0 248 aa8.26□□□□□ -1.09
HERC6-203ENST00000380265 V9GYY9 64 aa8.26□□□□□ -1.09
HERC6-203ENST00000380265 CR1P17927 2039 aa8.26□□□□□ -1.09
HERC6-203ENST00000380265 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
HERC6-203ENST00000380265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
HERC6-203ENST00000380265 DNAJC9-AS1A6NH13 148 aa8.25□□□□□ -1.09
HERC6-203ENST00000380265 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
HERC6-203ENST00000380265 C1orf195Q5TG92 126 aa8.25□□□□□ -1.09
HERC6-203ENST00000380265 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
HERC6-203ENST00000380265 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
HERC6-203ENST00000380265 FSHBP01225 129 aa8.25□□□□□ -1.09
HERC6-203ENST00000380265 IGHV4-28A0A0C4DH34 117 aa8.25□□□□□ -1.09
HERC6-203ENST00000380265 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
HERC6-203ENST00000380265 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
HERC6-203ENST00000380265 C16orf95Q9H693 158 aa8.24□□□□□ -1.09
HERC6-203ENST00000380265 APCP25054 2843 aa8.23□□□□□ -1.09
HERC6-203ENST00000380265 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
HERC6-203ENST00000380265 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
HERC6-203ENST00000380265 PRYO14603 147 aa8.23□□□□□ -1.09
HERC6-203ENST00000380265 IGLV6-57P01721 117 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 NOTCH1P46531 2555 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 IGLV1-51P01701 117 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
HERC6-203ENST00000380265 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.09
HERC6-203ENST00000380265 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.1
HERC6-203ENST00000380265 H3BQ85 93 aa8.21□□□□□ -1.1
HERC6-203ENST00000380265 DEFB135Q30KP9 77 aa8.2□□□□□ -1.1
HERC6-203ENST00000380265 FAM30AQ9NZY2 134 aa8.2□□□□□ -1.1
HERC6-203ENST00000380265 PRR4Q16378 134 aa8.19□□□□□ -1.1
HERC6-203ENST00000380265 CAMK2N2Q96S95 79 aa8.19□□□□□ -1.1
HERC6-203ENST00000380265 ESRGQ1W209 222 aa8.18□□□□□ -1.1
HERC6-203ENST00000380265 SMR3AQ99954 134 aa8.17□□□□□ -1.1
HERC6-203ENST00000380265 C6orf48Q9UBA6 75 aa8.17□□□□□ -1.1
HERC6-203ENST00000380265 DEFB113Q30KQ7 82 aa8.16□□□□□ -1.1
HERC6-203ENST00000380265 RETNQ9HD89 108 aa8.16□□□□□ -1.1
HERC6-203ENST00000380265 A0A0J9YWU9 116 aa8.15□□□□□ -1.1
HERC6-203ENST00000380265 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
HERC6-203ENST00000380265 IGHV4-30-4P0DP06 118 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms