RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PDE6GP18545 87 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 LINC00575Q6W349 94 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 ZNF292O60281 2723 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
SMAD9-202ENST00000379826 H3BQ85 93 aa7.85□□□□□ -1.15
SMAD9-202ENST00000379826 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMAD9-202ENST00000379826 CRYGAP11844 174 aa7.85□□□□□ -1.15
SMAD9-202ENST00000379826 C16orf90A8MZG2 172 aa7.85□□□□□ -1.15
SMAD9-202ENST00000379826 POLQO75417 2590 aa7.85□□□□□ -1.15
SMAD9-202ENST00000379826 B9D2Q9BPU9 175 aa7.84□□□□□ -1.15
SMAD9-202ENST00000379826 LELP1Q5T871 98 aa7.84□□□□□ -1.15
SMAD9-202ENST00000379826 C10orf25Q5T742 122 aa7.84□□□□□ -1.15
SMAD9-202ENST00000379826 CELA1Q9UNI1 258 aa7.84□□□□□ -1.15
SMAD9-202ENST00000379826 A0A096LNT2 108 aa7.84□□□□□ -1.16
SMAD9-202ENST00000379826 BPY2O14599 106 aa7.84□□□□□ -1.16
SMAD9-202ENST00000379826 KPRPQ5T749 579 aaPredicted RBP7.83□□□□□ -1.16
SMAD9-202ENST00000379826 MTORP42345 2549 aa7.83□□□□□ -1.16
SMAD9-202ENST00000379826 LINC01547P58512 204 aaPredicted RBP7.83□□□□□ -1.16
SMAD9-202ENST00000379826 RPL37AP8A6NKH3 93 aa7.82□□□□□ -1.16
SMAD9-202ENST00000379826 Q6ZVQ6 151 aa7.82□□□□□ -1.16
SMAD9-202ENST00000379826 GIG44P09565 113 aaPredicted RBP7.82□□□□□ -1.16
SMAD9-202ENST00000379826 PLAC8L1A1L4L8 177 aa7.82□□□□□ -1.16
SMAD9-202ENST00000379826 LINC01561Q8N1V8 128 aa7.81□□□□□ -1.16
SMAD9-202ENST00000379826 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
SMAD9-202ENST00000379826 ANKRD17O75179 2603 aaKnown RBP7.8□□□□□ -1.16
SMAD9-202ENST00000379826 C4orf26Q17RF5 130 aa7.8□□□□□ -1.16
SMAD9-202ENST00000379826 TRAV7A0A075B6U4 112 aa7.8□□□□□ -1.16
SMAD9-202ENST00000379826 M0R378 163 aa7.8□□□□□ -1.16
SMAD9-202ENST00000379826 Q8N9L7 120 aa7.8□□□□□ -1.16
SMAD9-202ENST00000379826 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
SMAD9-202ENST00000379826 USP9XQ93008 2570 aaPredicted RBP7.79□□□□□ -1.16
SMAD9-202ENST00000379826 FAM30AQ9NZY2 134 aa7.79□□□□□ -1.16
SMAD9-202ENST00000379826 MYO9AB2RTY4 2548 aa7.79□□□□□ -1.16
SMAD9-202ENST00000379826 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
SMAD9-202ENST00000379826 CSNK1G2-AS1Q8NCQ2 148 aa7.79□□□□□ -1.16
SMAD9-202ENST00000379826 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
SMAD9-202ENST00000379826 X6R8D5 127 aa7.78□□□□□ -1.16
SMAD9-202ENST00000379826 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
SMAD9-202ENST00000379826 WFDC10BQ8IUB3 73 aa7.77□□□□□ -1.17
SMAD9-202ENST00000379826 Q6ZQT0 140 aa7.77□□□□□ -1.17
SMAD9-202ENST00000379826 BSNQ9UPA5 3926 aa7.77□□□□□ -1.17
SMAD9-202ENST00000379826 SYCNQ0VAF6 134 aa7.76□□□□□ -1.17
SMAD9-202ENST00000379826 DOPEY1Q5JWR5 2465 aa7.76□□□□□ -1.17
SMAD9-202ENST00000379826 TLN2Q9Y4G6 2542 aa7.76□□□□□ -1.17
SMAD9-202ENST00000379826 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
SMAD9-202ENST00000379826 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
SMAD9-202ENST00000379826 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
SMAD9-202ENST00000379826 LYPD5Q6UWN5 251 aa7.75□□□□□ -1.17
SMAD9-202ENST00000379826 Q6ZRU5 148 aa7.74□□□□□ -1.17
SMAD9-202ENST00000379826 SETD2Q9BYW2 2564 aaPredicted RBP7.74□□□□□ -1.17
SMAD9-202ENST00000379826 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
SMAD9-202ENST00000379826 Q6ZTC4 211 aa7.74□□□□□ -1.17
SMAD9-202ENST00000379826 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
SMAD9-202ENST00000379826 PRR4Q16378 134 aa7.72□□□□□ -1.17
SMAD9-202ENST00000379826 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
SMAD9-202ENST00000379826 C19orf73Q9NVV2 129 aa7.72□□□□□ -1.17
SMAD9-202ENST00000379826 HRNRQ86YZ3 2850 aaPredicted RBP7.72□□□□□ -1.17
SMAD9-202ENST00000379826 FN1P02751 2386 aaKnown RBP7.72□□□□□ -1.17
SMAD9-202ENST00000379826 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
SMAD9-202ENST00000379826 EGFEM1PQ0D2K5 195 aa7.7□□□□□ -1.18
SMAD9-202ENST00000379826 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
SMAD9-202ENST00000379826 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
SMAD9-202ENST00000379826 HIGD2AQ9BW72 106 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 DCHS2Q6V1P9 2916 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 LOC110117498A0A087WWA1 95 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 CXCL6P80162 114 aa7.69□□□□□ -1.18
SMAD9-202ENST00000379826 NDUFC1O43677 76 aa7.68□□□□□ -1.18
SMAD9-202ENST00000379826 A0A096LNI7 61 aa7.68□□□□□ -1.18
SMAD9-202ENST00000379826 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
SMAD9-202ENST00000379826 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
SMAD9-202ENST00000379826 KRTAP10-3P60369 221 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 TMEM254Q8TBM7 123 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 TRBV7-6A0A0J9YX20 115 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 PRYO14603 147 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 DEFB116Q30KQ4 102 aa7.67□□□□□ -1.18
SMAD9-202ENST00000379826 IGLV6-57P01721 117 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 MP68P56378 58 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 NDUFS5O43920 106 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 LINC00474Q9P2X8 69 aa7.66□□□□□ -1.18
SMAD9-202ENST00000379826 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
SMAD9-202ENST00000379826 ATP5EP56381 51 aaPredicted RBP7.64□□□□□ -1.19
SMAD9-202ENST00000379826 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
SMAD9-202ENST00000379826 K7EIL1 84 aa7.64□□□□□ -1.19
SMAD9-202ENST00000379826 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
SMAD9-202ENST00000379826 SMIM29Q86T20 159 aa7.63□□□□□ -1.19
SMAD9-202ENST00000379826 Q8NAQ8 132 aa7.63□□□□□ -1.19
SMAD9-202ENST00000379826 H0Y9J4 135 aa7.63□□□□□ -1.19
SMAD9-202ENST00000379826 BAHCC1Q9P281 2608 aa7.63□□□□□ -1.19
SMAD9-202ENST00000379826 ESRGQ1W209 222 aa7.62□□□□□ -1.19
SMAD9-202ENST00000379826 Q8NDZ9 215 aa7.62□□□□□ -1.19
SMAD9-202ENST00000379826 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
SMAD9-202ENST00000379826 ZFHX3Q15911 3703 aa7.61□□□□□ -1.19
SMAD9-202ENST00000379826 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms