RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 COL12A1Q99715 3063 aa4.59□□□□□ -1.67
NEDD9-202ENST00000379446 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.67
NEDD9-202ENST00000379446 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
NEDD9-202ENST00000379446 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
NEDD9-202ENST00000379446 LINC00467Q9BRT7 94 aa4.59□□□□□ -1.67
NEDD9-202ENST00000379446 KLLNB2CW77 178 aa4.59□□□□□ -1.68
NEDD9-202ENST00000379446 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.68
NEDD9-202ENST00000379446 H3BT86 120 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 M0QY20 66 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 FHL2Q14192 279 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 SND1-IT1Q9HBX3 110 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 SPENQ96T58 3664 aaKnown RBP4.58□□□□□ -1.68
NEDD9-202ENST00000379446 TSHBP01222 138 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 A0A0B4J2C4 111 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 LINC01546A6NGU7 62 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 IGIPA6NJ69 53 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 LINC00643Q86TS7 51 aa4.58□□□□□ -1.68
NEDD9-202ENST00000379446 SLPIP03973 132 aa4.57□□□□□ -1.68
NEDD9-202ENST00000379446 C9orf116Q5BN46 136 aaPredicted RBP4.57□□□□□ -1.68
NEDD9-202ENST00000379446 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
NEDD9-202ENST00000379446 IGLV4-3A0A075B6K6 122 aa4.57□□□□□ -1.68
NEDD9-202ENST00000379446 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
NEDD9-202ENST00000379446 DCHS2Q6V1P9 2916 aa4.57□□□□□ -1.68
NEDD9-202ENST00000379446 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 ATOX1O00244 68 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 RBM3P98179 157 aaKnown RBP4.56□□□□□ -1.68
NEDD9-202ENST00000379446 C19orf73Q9NVV2 129 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 X6R8D5 127 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 Q8NAQ8 132 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 PIK3CD-AS1Q5SR53 167 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 MIR7-3HGQ8N6C7 128 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 KIF25-AS1Q9Y6Z4 181 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 HRNRQ86YZ3 2850 aaPredicted RBP4.56□□□□□ -1.68
NEDD9-202ENST00000379446 TRBV30A0A0K0K1B3 111 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 TMEM223A0PJW6 202 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 COX7CP15954 63 aa4.56□□□□□ -1.68
NEDD9-202ENST00000379446 LINC00528Q8N1L1 170 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 LINC00959A0A1B0GUT2 108 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 Q6ZRP5 223 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
NEDD9-202ENST00000379446 LST1O00453 97 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 TNP2Q05952 138 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 SPACA4Q8TDM5 124 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 Q9UF83 564 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 ACYP1P07311 99 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 TYMSOSQ8TAI1 123 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 TRBV6-5A0A0K0K1A5 114 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
NEDD9-202ENST00000379446 COX7BP24311 80 aa4.54□□□□□ -1.68
NEDD9-202ENST00000379446 CRYGAP11844 174 aa4.53□□□□□ -1.68
NEDD9-202ENST00000379446 UNQ6190/PRO20217Q6UXQ8 127 aa4.53□□□□□ -1.68
NEDD9-202ENST00000379446 FAM19A4Q96LR4 140 aa4.53□□□□□ -1.68
NEDD9-202ENST00000379446 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
NEDD9-202ENST00000379446 EIF4EBP3O60516 100 aaPredicted RBP4.52□□□□□ -1.69
NEDD9-202ENST00000379446 A0A087WTM6 91 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 ENHOQ6UWT2 76 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 SMCR5Q8TEV8 140 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 H3BQ85 93 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 KLK9Q2XQG4 91 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
NEDD9-202ENST00000379446 SERP2Q8N6R1 65 aa4.5□□□□□ -1.69
NEDD9-202ENST00000379446 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
NEDD9-202ENST00000379446 SPANXDQ9BXN6 97 aa4.5□□□□□ -1.69
NEDD9-202ENST00000379446 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 M0R2T5 61 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 TRBV7-7A0A0K0K1E9 115 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 A0A087WYN8 130 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 IMUPQ9GZP8 106 aa4.49□□□□□ -1.69
NEDD9-202ENST00000379446 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 H3BNG1 76 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 TMEM258P61165 79 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
NEDD9-202ENST00000379446 LINC00846Q9NV44 126 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 ZANQ9Y493 2812 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 PRLHP81277 87 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
NEDD9-202ENST00000379446 AMELXQ99217 191 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 M0R378 163 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 Q6ZRU5 148 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
NEDD9-202ENST00000379446 UPK3BQ9BT76 320 aa4.46□□□□□ -1.69
NEDD9-202ENST00000379446 ORMDL1Q9P0S3 153 aa4.46□□□□□ -1.69
NEDD9-202ENST00000379446 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms