RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TOMM6Q96B49 74 aa7.71□□□□□ -1.17
PCDHGA1-201ENST00000378105 NOTCH1P46531 2555 aa7.71□□□□□ -1.17
PCDHGA1-201ENST00000378105 HAMPP81172 84 aa7.71□□□□□ -1.18
PCDHGA1-201ENST00000378105 IGKV2D-24A0A075B6R9 120 aa7.71□□□□□ -1.18
PCDHGA1-201ENST00000378105 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
PCDHGA1-201ENST00000378105 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
PCDHGA1-201ENST00000378105 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
PCDHGA1-201ENST00000378105 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
PCDHGA1-201ENST00000378105 TRBV6-1A0A0K0K1D8 114 aa7.7□□□□□ -1.18
PCDHGA1-201ENST00000378105 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
PCDHGA1-201ENST00000378105 IGHV4-30-4P0DP06 118 aa7.69□□□□□ -1.18
PCDHGA1-201ENST00000378105 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
PCDHGA1-201ENST00000378105 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
PCDHGA1-201ENST00000378105 TSHBP01222 138 aa7.69□□□□□ -1.18
PCDHGA1-201ENST00000378105 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
PCDHGA1-201ENST00000378105 A8MUN3 132 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 VSIG2Q96IQ7 327 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 LINC01600Q96MT4 127 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 PRO0255Q9UI72 69 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 PKD1P98161 4303 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 MRPS36P82909 103 aaKnown RBP7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
PCDHGA1-201ENST00000378105 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 MIFP14174 115 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 CCL18P55774 89 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 HECTD4Q9Y4D8 3996 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 RNASE3P12724 160 aaKnown RBP7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 KRTAP24-1Q3LI83 254 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 KLK12Q9UKR0 248 aa7.67□□□□□ -1.18
PCDHGA1-201ENST00000378105 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
PCDHGA1-201ENST00000378105 IGHV4-28A0A0C4DH34 117 aa7.66□□□□□ -1.18
PCDHGA1-201ENST00000378105 KLLNB2CW77 178 aa7.66□□□□□ -1.18
PCDHGA1-201ENST00000378105 COX7A2LO14548 114 aa7.66□□□□□ -1.18
PCDHGA1-201ENST00000378105 C1orf158Q8N1D5 194 aa7.66□□□□□ -1.18
PCDHGA1-201ENST00000378105 SOCS3O14543 225 aa7.65□□□□□ -1.18
PCDHGA1-201ENST00000378105 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.19
PCDHGA1-201ENST00000378105 TRAV7A0A075B6U4 112 aa7.65□□□□□ -1.19
PCDHGA1-201ENST00000378105 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.19
PCDHGA1-201ENST00000378105 MED14OSP0DP75 135 aa7.65□□□□□ -1.19
PCDHGA1-201ENST00000378105 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
PCDHGA1-201ENST00000378105 FSHBP01225 129 aa7.64□□□□□ -1.19
PCDHGA1-201ENST00000378105 NBEAL1Q6ZS30 2694 aa7.64□□□□□ -1.19
PCDHGA1-201ENST00000378105 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 LEPROTO15243 131 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 VPREB1P12018 145 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 Q6ZRP5 223 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 PLECQ15149 4684 aaKnown RBP7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 DNAH10Q8IVF4 4471 aa7.63□□□□□ -1.19
PCDHGA1-201ENST00000378105 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
PCDHGA1-201ENST00000378105 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
PCDHGA1-201ENST00000378105 LINC01546A6NGU7 62 aa7.62□□□□□ -1.19
PCDHGA1-201ENST00000378105 PRAC1Q96KF2 57 aa7.61□□□□□ -1.19
PCDHGA1-201ENST00000378105 A0A087WYN8 130 aa7.61□□□□□ -1.19
PCDHGA1-201ENST00000378105 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
PCDHGA1-201ENST00000378105 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
PCDHGA1-201ENST00000378105 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 M0QY20 66 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 LECT2O14960 151 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 MIAQ16674 131 aa7.6□□□□□ -1.19
PCDHGA1-201ENST00000378105 A0A0J9YWU9 116 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 Q9H8V8 135 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 FBN3Q75N90 2809 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 NSD1Q96L73 2696 aaPredicted RBP7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 LINC00269Q8N2A0 174 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 LITAFQ99732 161 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 LINC00467Q9BRT7 94 aa7.59□□□□□ -1.19
PCDHGA1-201ENST00000378105 KRTAP1-1Q07627 177 aa7.58□□□□□ -1.2
PCDHGA1-201ENST00000378105 C11orf72Q8NBR9 251 aa7.58□□□□□ -1.2
PCDHGA1-201ENST00000378105 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
PCDHGA1-201ENST00000378105 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
PCDHGA1-201ENST00000378105 Q8N3U1 123 aa7.57□□□□□ -1.2
PCDHGA1-201ENST00000378105 OVOL2Q9BRP0 275 aa7.57□□□□□ -1.2
PCDHGA1-201ENST00000378105 C16orf90A8MZG2 172 aa7.56□□□□□ -1.2
PCDHGA1-201ENST00000378105 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
PCDHGA1-201ENST00000378105 Q6ZVQ6 151 aa7.56□□□□□ -1.2
PCDHGA1-201ENST00000378105 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
PCDHGA1-201ENST00000378105 UBE2BP63146 152 aa7.55□□□□□ -1.2
PCDHGA1-201ENST00000378105 REG3AQ06141 175 aa7.55□□□□□ -1.2
PCDHGA1-201ENST00000378105 KPRPQ5T749 579 aaPredicted RBP7.55□□□□□ -1.2
PCDHGA1-201ENST00000378105 CAMK2N2Q96S95 79 aa7.55□□□□□ -1.2
PCDHGA1-201ENST00000378105 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
PCDHGA1-201ENST00000378105 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
PCDHGA1-201ENST00000378105 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
PCDHGA1-201ENST00000378105 Q8N9L7 120 aa7.53□□□□□ -1.2
PCDHGA1-201ENST00000378105 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
PCDHGA1-201ENST00000378105 Q6ZTC4 211 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms