RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
PCDH9-202ENST00000377865 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
PCDH9-202ENST00000377865 SMR3AQ99954 134 aa5.86□□□□□ -1.47
PCDH9-202ENST00000377865 Q6ZRP5 223 aa5.86□□□□□ -1.47
PCDH9-202ENST00000377865 PRLHP81277 87 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 MUC6Q6W4X9 2439 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 IGHV6-1A0A0B4J1U7 121 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 CSPG4Q6UVK1 2322 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
PCDH9-202ENST00000377865 CENPFP49454 3210 aa5.84□□□□□ -1.47
PCDH9-202ENST00000377865 LINC00336Q6ZUF6 198 aa5.83□□□□□ -1.48
PCDH9-202ENST00000377865 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
PCDH9-202ENST00000377865 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
PCDH9-202ENST00000377865 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
PCDH9-202ENST00000377865 CEP350Q5VT06 3117 aa5.83□□□□□ -1.48
PCDH9-202ENST00000377865 CHD7Q9P2D1 2997 aa5.82□□□□□ -1.48
PCDH9-202ENST00000377865 K7EQZ3 153 aa5.82□□□□□ -1.48
PCDH9-202ENST00000377865 WNK1Q9H4A3 2382 aa5.82□□□□□ -1.48
PCDH9-202ENST00000377865 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
PCDH9-202ENST00000377865 HTTP42858 3142 aa5.82□□□□□ -1.48
PCDH9-202ENST00000377865 DNAH10OSP0CZ25 163 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 TLX1NBP0CAT3 122 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 C15orf56Q8N910 161 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 Q8N377 158 aa5.81□□□□□ -1.48
PCDH9-202ENST00000377865 A8MWP4 228 aa5.8□□□□□ -1.48
PCDH9-202ENST00000377865 C16orf90A8MZG2 172 aa5.8□□□□□ -1.48
PCDH9-202ENST00000377865 TTC28Q96AY4 2481 aa5.8□□□□□ -1.48
PCDH9-202ENST00000377865 PIEZO2Q9H5I5 2752 aa5.8□□□□□ -1.48
PCDH9-202ENST00000377865 CHD9Q3L8U1 2897 aa5.8□□□□□ -1.48
PCDH9-202ENST00000377865 K7ERS5 55 aa5.79□□□□□ -1.48
PCDH9-202ENST00000377865 MOBPQ13875 183 aa5.79□□□□□ -1.48
PCDH9-202ENST00000377865 Q5XG85 94 aa5.78□□□□□ -1.48
PCDH9-202ENST00000377865 HIVEP2P31629 2446 aa5.78□□□□□ -1.48
PCDH9-202ENST00000377865 M0R2N4 97 aa5.78□□□□□ -1.48
PCDH9-202ENST00000377865 TLN1Q9Y490 2541 aaKnown RBP5.77□□□□□ -1.49
PCDH9-202ENST00000377865 IGLV5-48A0A075B6I7 105 aa5.77□□□□□ -1.49
PCDH9-202ENST00000377865 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
PCDH9-202ENST00000377865 FAM208BQ5VWN6 2430 aa5.77□□□□□ -1.49
PCDH9-202ENST00000377865 ACYP2P14621 99 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 UTRNP46939 3433 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 SPG11Q96JI7 2443 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 EPM2AB3EWF7 344 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 PRR15Q8IV56 129 aa5.76□□□□□ -1.49
PCDH9-202ENST00000377865 IGLV5-37A0A075B6J1 123 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 FAM168BA1KXE4 195 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 RPL37AP61513 92 aaKnown RBP5.75□□□□□ -1.49
PCDH9-202ENST00000377865 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 PCNTO95613 3336 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 A8MUN3 132 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 COA5Q86WW8 74 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 CIRBP-AS1Q8TBR5 109 aa5.75□□□□□ -1.49
PCDH9-202ENST00000377865 Q1T7F1 81 aa5.74□□□□□ -1.49
PCDH9-202ENST00000377865 TRANK1O15050 2925 aa5.74□□□□□ -1.49
PCDH9-202ENST00000377865 C5orf42Q9H799 3197 aa5.74□□□□□ -1.49
PCDH9-202ENST00000377865 CYSTM1Q9H1C7 97 aa5.74□□□□□ -1.49
PCDH9-202ENST00000377865 PHF5AQ7RTV0 110 aaKnown RBP5.73□□□□□ -1.49
PCDH9-202ENST00000377865 HIVEP3Q5T1R4 2406 aa5.73□□□□□ -1.49
PCDH9-202ENST00000377865 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
PCDH9-202ENST00000377865 A0A1W2PNM2 257 aa5.73□□□□□ -1.49
PCDH9-202ENST00000377865 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
PCDH9-202ENST00000377865 IGLV5-52A0A0A0MRZ9 124 aa5.71□□□□□ -1.49
PCDH9-202ENST00000377865 A0A1B0GU69 56 aa5.71□□□□□ -1.5
PCDH9-202ENST00000377865 KRTAP10-3P60369 221 aa5.71□□□□□ -1.5
PCDH9-202ENST00000377865 IGF2RP11717 2491 aa5.71□□□□□ -1.5
PCDH9-202ENST00000377865 KRTAP1-3Q8IUG1 177 aa5.7□□□□□ -1.5
PCDH9-202ENST00000377865 NAV2Q8IVL1 2488 aa5.7□□□□□ -1.5
PCDH9-202ENST00000377865 SPRR4Q96PI1 79 aa5.7□□□□□ -1.5
PCDH9-202ENST00000377865 CD164Q04900 197 aa5.7□□□□□ -1.5
PCDH9-202ENST00000377865 ACACBO00763 2458 aa5.69□□□□□ -1.5
PCDH9-202ENST00000377865 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
PCDH9-202ENST00000377865 C2CD3Q4AC94 2353 aa5.69□□□□□ -1.5
PCDH9-202ENST00000377865 MRPL34Q9BQ48 92 aaKnown RBP5.69□□□□□ -1.5
PCDH9-202ENST00000377865 C8orf87E5RJ46 101 aa5.68□□□□□ -1.5
PCDH9-202ENST00000377865 ATRXP46100 2492 aa5.68□□□□□ -1.5
PCDH9-202ENST00000377865 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
PCDH9-202ENST00000377865 C8orf17Q9NRJ1 99 aa5.67□□□□□ -1.5
PCDH9-202ENST00000377865 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-202ENST00000377865 Q8NDZ9 215 aa5.66□□□□□ -1.5
PCDH9-202ENST00000377865 OXTP01178 125 aa5.66□□□□□ -1.5
PCDH9-202ENST00000377865 DSCR10P59022 87 aa5.65□□□□□ -1.5
PCDH9-202ENST00000377865 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
PCDH9-202ENST00000377865 C7orf65Q6ZTY9 151 aa5.64□□□□□ -1.51
PCDH9-202ENST00000377865 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
PCDH9-202ENST00000377865 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 NBDYA0A0U1RRE5 68 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 MDFIQ99750 246 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 LINC00313P59037 77 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
PCDH9-202ENST00000377865 A0A0C4DFX4 3053 aa5.63□□□□□ -1.51
PCDH9-202ENST00000377865 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
PCDH9-202ENST00000377865 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
PCDH9-202ENST00000377865 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms