RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.17
HIF3A-205ENST00000377670 ZNF580Q9UK33 172 aa7.71□□□□□ -1.17
HIF3A-205ENST00000377670 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
HIF3A-205ENST00000377670 FLNAP21333 2647 aaKnown RBP7.71□□□□□ -1.18
HIF3A-205ENST00000377670 NTM-AS1Q6ZSK4 140 aa7.71□□□□□ -1.18
HIF3A-205ENST00000377670 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
HIF3A-205ENST00000377670 ADGRG4Q8IZF6 3080 aa7.71□□□□□ -1.18
HIF3A-205ENST00000377670 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
HIF3A-205ENST00000377670 ITPR3Q14573 2671 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 Q8N9L7 120 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 A0A096LNJ9 63 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 CYSRT1A8MQ03 144 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 ADAMTSL4-AS1Q5T5F5 129 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 ATMQ13315 3056 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 COX6A2Q02221 97 aa7.7□□□□□ -1.18
HIF3A-205ENST00000377670 LOC400499M0QZD8 3231 aa7.69□□□□□ -1.18
HIF3A-205ENST00000377670 HELZ2Q9BYK8 2649 aaKnown RBP7.69□□□□□ -1.18
HIF3A-205ENST00000377670 LYPD5Q6UWN5 251 aa7.69□□□□□ -1.18
HIF3A-205ENST00000377670 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
HIF3A-205ENST00000377670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
HIF3A-205ENST00000377670 Q8N814 137 aa7.69□□□□□ -1.18
HIF3A-205ENST00000377670 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 DMXL1Q9Y485 3027 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 PRYO14603 147 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 EGFEM1PQ0D2K5 195 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 COX17Q14061 63 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 CDIP1Q9H305 208 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 MGAM2Q2M2H8 2515 aa7.68□□□□□ -1.18
HIF3A-205ENST00000377670 PSPHP1O15172 72 aa7.67□□□□□ -1.18
HIF3A-205ENST00000377670 FHL2Q14192 279 aa7.67□□□□□ -1.18
HIF3A-205ENST00000377670 SMIM1B2RUZ4 78 aa7.67□□□□□ -1.18
HIF3A-205ENST00000377670 Q8IZM0 81 aa7.67□□□□□ -1.18
HIF3A-205ENST00000377670 COL27A1Q8IZC6 1860 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-205ENST00000377670 MUC4Q99102 2169 aa7.66□□□□□ -1.18
HIF3A-205ENST00000377670 PRR3P79522 188 aaKnown RBP7.66□□□□□ -1.18
HIF3A-205ENST00000377670 ZZEF1O43149 2961 aa7.66□□□□□ -1.18
HIF3A-205ENST00000377670 ATRQ13535 2644 aa7.66□□□□□ -1.18
HIF3A-205ENST00000377670 Q8N2B8 174 aa7.66□□□□□ -1.18
HIF3A-205ENST00000377670 LIMD2Q9BT23 127 aa7.65□□□□□ -1.18
HIF3A-205ENST00000377670 Q8N3U1 123 aa7.65□□□□□ -1.18
HIF3A-205ENST00000377670 C2orf48Q96LS8 159 aa7.65□□□□□ -1.18
HIF3A-205ENST00000377670 LINC00208Q96KT6 92 aa7.65□□□□□ -1.19
HIF3A-205ENST00000377670 TEP1Q99973 2627 aaKnown RBP7.65□□□□□ -1.19
HIF3A-205ENST00000377670 C9orf116Q5BN46 136 aaPredicted RBP7.65□□□□□ -1.19
HIF3A-205ENST00000377670 WDFY3Q8IZQ1 3526 aa7.63□□□□□ -1.19
HIF3A-205ENST00000377670 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
HIF3A-205ENST00000377670 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
HIF3A-205ENST00000377670 F8WDY8 70 aa7.63□□□□□ -1.19
HIF3A-205ENST00000377670 MUC3AQ02505 3323 aa7.63□□□□□ -1.19
HIF3A-205ENST00000377670 MAST4O15021 2626 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 Q6ZSN1 163 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 Q6ZVQ6 151 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 LINC00846Q9NV44 126 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 TRBV10-3A0A0K0K1G6 114 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
HIF3A-205ENST00000377670 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
HIF3A-205ENST00000377670 NBDYA0A0U1RRE5 68 aa7.61□□□□□ -1.19
HIF3A-205ENST00000377670 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
HIF3A-205ENST00000377670 AMELXQ99217 191 aa7.6□□□□□ -1.19
HIF3A-205ENST00000377670 KALRNO60229 2985 aa7.6□□□□□ -1.19
HIF3A-205ENST00000377670 RTL8CO15255 209 aa7.59□□□□□ -1.19
HIF3A-205ENST00000377670 IGLV4-60A0A075B6I1 120 aa7.59□□□□□ -1.19
HIF3A-205ENST00000377670 ESRGQ1W209 222 aa7.59□□□□□ -1.19
HIF3A-205ENST00000377670 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
HIF3A-205ENST00000377670 LINC00575Q6W349 94 aa7.58□□□□□ -1.2
HIF3A-205ENST00000377670 LINC01547P58512 204 aaPredicted RBP7.58□□□□□ -1.2
HIF3A-205ENST00000377670 LINC00315P59091 139 aa7.57□□□□□ -1.2
HIF3A-205ENST00000377670 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
HIF3A-205ENST00000377670 X6R8D5 127 aa7.57□□□□□ -1.2
HIF3A-205ENST00000377670 PRO0628Q9UI54 55 aa7.57□□□□□ -1.2
HIF3A-205ENST00000377670 TACC2O95359 2948 aa7.56□□□□□ -1.2
HIF3A-205ENST00000377670 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
HIF3A-205ENST00000377670 COX8CQ7Z4L0 72 aa7.56□□□□□ -1.2
HIF3A-205ENST00000377670 C4orf26Q17RF5 130 aa7.56□□□□□ -1.2
HIF3A-205ENST00000377670 LRBAP50851 2863 aa7.55□□□□□ -1.2
HIF3A-205ENST00000377670 Q9BRP9 147 aa7.55□□□□□ -1.2
HIF3A-205ENST00000377670 IGSF10Q6WRI0 2623 aa7.55□□□□□ -1.2
HIF3A-205ENST00000377670 A8MTW9 85 aa7.55□□□□□ -1.2
HIF3A-205ENST00000377670 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
HIF3A-205ENST00000377670 Q9UF83 564 aa7.54□□□□□ -1.2
HIF3A-205ENST00000377670 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
HIF3A-205ENST00000377670 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
HIF3A-205ENST00000377670 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
HIF3A-205ENST00000377670 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
HIF3A-205ENST00000377670 H0Y9P7 68 aa7.53□□□□□ -1.2
HIF3A-205ENST00000377670 CRYGAP11844 174 aa7.53□□□□□ -1.2
HIF3A-205ENST00000377670 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
HIF3A-205ENST00000377670 FLNCQ14315 2725 aa7.53□□□□□ -1.2
HIF3A-205ENST00000377670 SPACA4Q8TDM5 124 aa7.53□□□□□ -1.2
HIF3A-205ENST00000377670 Q6ZRP5 223 aa7.52□□□□□ -1.21
HIF3A-205ENST00000377670 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
HIF3A-205ENST00000377670 K7EIL1 84 aa7.52□□□□□ -1.21
HIF3A-205ENST00000377670 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
HIF3A-205ENST00000377670 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
HIF3A-205ENST00000377670 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
HIF3A-205ENST00000377670 Q6ZRU5 148 aa7.5□□□□□ -1.21
HIF3A-205ENST00000377670 H3BNG1 76 aa7.5□□□□□ -1.21
HIF3A-205ENST00000377670 PRLHP81277 87 aa7.5□□□□□ -1.21
HIF3A-205ENST00000377670 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
HIF3A-205ENST00000377670 HCG22E2RYF7 251 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms