RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
TRIM40-206ENST00000376724 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
TRIM40-206ENST00000376724 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
TRIM40-206ENST00000376724 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
TRIM40-206ENST00000376724 C6orf48Q9UBA6 75 aa8.58□□□□□ -1.04
TRIM40-206ENST00000376724 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
TRIM40-206ENST00000376724 COX6CP09669 75 aa8.58□□□□□ -1.04
TRIM40-206ENST00000376724 PRKDCP78527 4128 aaKnown RBP8.57□□□□□ -1.04
TRIM40-206ENST00000376724 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
TRIM40-206ENST00000376724 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 LYSTQ99698 3801 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 TEX49A0A1B0GTD5 131 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 Q6ZRU5 148 aa8.56□□□□□ -1.04
TRIM40-206ENST00000376724 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
TRIM40-206ENST00000376724 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
TRIM40-206ENST00000376724 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
TRIM40-206ENST00000376724 RMI2Q96E14 147 aa8.54□□□□□ -1.04
TRIM40-206ENST00000376724 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 NCR3O14931 201 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 LECT2O14960 151 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 Q8NDZ9 215 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 KRTAP1-5Q9BYS1 174 aa8.53□□□□□ -1.04
TRIM40-206ENST00000376724 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
TRIM40-206ENST00000376724 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
TRIM40-206ENST00000376724 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
TRIM40-206ENST00000376724 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
TRIM40-206ENST00000376724 H3BT86 120 aa8.51□□□□□ -1.05
TRIM40-206ENST00000376724 NDUFC2O95298 119 aa8.51□□□□□ -1.05
TRIM40-206ENST00000376724 SYCNQ0VAF6 134 aa8.51□□□□□ -1.05
TRIM40-206ENST00000376724 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
TRIM40-206ENST00000376724 MUC7Q8TAX7 377 aa8.51□□□□□ -1.05
TRIM40-206ENST00000376724 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
TRIM40-206ENST00000376724 LST1O00453 97 aa8.49□□□□□ -1.05
TRIM40-206ENST00000376724 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
TRIM40-206ENST00000376724 PLECQ15149 4684 aaKnown RBP8.48□□□□□ -1.05
TRIM40-206ENST00000376724 NDUFC2-KCTD14E9PQ53 114 aa8.48□□□□□ -1.05
TRIM40-206ENST00000376724 S100A7L2Q5SY68 101 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 DNAH7Q8WXX0 4024 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 F8WDY8 70 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 PSCAO43653 123 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 SLPIP03973 132 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
TRIM40-206ENST00000376724 Q6ZRP5 223 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
TRIM40-206ENST00000376724 TENM2Q9NT68 2774 aa8.46□□□□□ -1.06
TRIM40-206ENST00000376724 ACYP1P07311 99 aa8.45□□□□□ -1.06
TRIM40-206ENST00000376724 C3orf22Q8N5N4 141 aa8.45□□□□□ -1.06
TRIM40-206ENST00000376724 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
TRIM40-206ENST00000376724 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
TRIM40-206ENST00000376724 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
TRIM40-206ENST00000376724 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
TRIM40-206ENST00000376724 C9orf153Q5TBE3 101 aa8.43□□□□□ -1.06
TRIM40-206ENST00000376724 DNAH10Q8IVF4 4471 aa8.43□□□□□ -1.06
TRIM40-206ENST00000376724 A0A087WYN8 130 aa8.42□□□□□ -1.06
TRIM40-206ENST00000376724 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
TRIM40-206ENST00000376724 UQCRQO14949 82 aa8.42□□□□□ -1.06
TRIM40-206ENST00000376724 H0YGX0 51 aa8.42□□□□□ -1.06
TRIM40-206ENST00000376724 M0R2N4 97 aa8.42□□□□□ -1.06
TRIM40-206ENST00000376724 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
TRIM40-206ENST00000376724 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
TRIM40-206ENST00000376724 A0A1B0GX51 115 aa8.41□□□□□ -1.06
TRIM40-206ENST00000376724 TRACP01848 142 aa8.41□□□□□ -1.06
TRIM40-206ENST00000376724 VPREB1P12018 145 aa8.41□□□□□ -1.06
TRIM40-206ENST00000376724 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
TRIM40-206ENST00000376724 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
TRIM40-206ENST00000376724 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
TRIM40-206ENST00000376724 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
TRIM40-206ENST00000376724 J3KT08 172 aa8.39□□□□□ -1.07
TRIM40-206ENST00000376724 DNAL4O96015 105 aa8.39□□□□□ -1.07
TRIM40-206ENST00000376724 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
TRIM40-206ENST00000376724 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
TRIM40-206ENST00000376724 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
TRIM40-206ENST00000376724 M0R378 163 aa8.37□□□□□ -1.07
TRIM40-206ENST00000376724 BAALC-AS2P0C853 105 aa8.37□□□□□ -1.07
TRIM40-206ENST00000376724 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
TRIM40-206ENST00000376724 SERTAD4-AS1Q5TG53 156 aa8.37□□□□□ -1.07
TRIM40-206ENST00000376724 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 COX7CP15954 63 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
TRIM40-206ENST00000376724 NKAPP1Q8N9T2 125 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 SMCR5Q8TEV8 140 aa8.36□□□□□ -1.07
TRIM40-206ENST00000376724 CRYGAP11844 174 aa8.34□□□□□ -1.07
TRIM40-206ENST00000376724 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
TRIM40-206ENST00000376724 C14orf177Q52M58 125 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms