RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CAMK2N2Q96S95 79 aa13.91□□□□□ -0.18
HLA-C-201ENST00000376228 C6orf48Q9UBA6 75 aa13.91□□□□□ -0.18
HLA-C-201ENST00000376228 C9orf116Q5BN46 136 aaPredicted RBP13.9□□□□□ -0.18
HLA-C-201ENST00000376228 SPCS1Q9Y6A9 102 aa13.9□□□□□ -0.18
HLA-C-201ENST00000376228 PKD1P98161 4303 aa13.9□□□□□ -0.18
HLA-C-201ENST00000376228 A0A1B0GVY2 172 aa13.9□□□□□ -0.19
HLA-C-201ENST00000376228 TTC32Q5I0X7 151 aa13.9□□□□□ -0.19
HLA-C-201ENST00000376228 LYRM7Q5U5X0 104 aa13.9□□□□□ -0.19
HLA-C-201ENST00000376228 NDUFC2O95298 119 aa13.88□□□□□ -0.19
HLA-C-201ENST00000376228 PKHD1P08F94 4074 aa13.87□□□□□ -0.19
HLA-C-201ENST00000376228 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
HLA-C-201ENST00000376228 USP17L23D6RBM5 183 aa13.86□□□□□ -0.19
HLA-C-201ENST00000376228 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
HLA-C-201ENST00000376228 Q6ZRU5 148 aa13.86□□□□□ -0.19
HLA-C-201ENST00000376228 IGKV2-28A0A075B6P5 120 aa13.85□□□□□ -0.19
HLA-C-201ENST00000376228 IGKV2D-28P01615 120 aa13.85□□□□□ -0.19
HLA-C-201ENST00000376228 RPL13AP40429 203 aaKnown RBP13.85□□□□□ -0.19
HLA-C-201ENST00000376228 TNP2Q05952 138 aa13.85□□□□□ -0.19
HLA-C-201ENST00000376228 SYCNQ0VAF6 134 aa13.85□□□□□ -0.19
HLA-C-201ENST00000376228 Q1RN00 199 aa13.83□□□□□ -0.2
HLA-C-201ENST00000376228 TRBV20-1A0A075B6N2 111 aa13.82□□□□□ -0.2
HLA-C-201ENST00000376228 H7C2G1 150 aa13.82□□□□□ -0.2
HLA-C-201ENST00000376228 PSMB2P49721 201 aa13.81□□□□□ -0.2
HLA-C-201ENST00000376228 LINC00337Q8N6G1 96 aa13.81□□□□□ -0.2
HLA-C-201ENST00000376228 DNAH11Q96DT5 4516 aa13.8□□□□□ -0.2
HLA-C-201ENST00000376228 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
HLA-C-201ENST00000376228 TRIAP1O43715 76 aa13.79□□□□□ -0.2
HLA-C-201ENST00000376228 TLX1NBP0CAT3 122 aa13.79□□□□□ -0.2
HLA-C-201ENST00000376228 CARD19Q96LW7 228 aa13.79□□□□□ -0.2
HLA-C-201ENST00000376228 COX6CP09669 75 aa13.78□□□□□ -0.2
HLA-C-201ENST00000376228 SCGB1C2P0DMR2 95 aa13.78□□□□□ -0.2
HLA-C-201ENST00000376228 DYNC1H1Q14204 4646 aaKnown RBP13.77□□□□□ -0.2
HLA-C-201ENST00000376228 SLPIP03973 132 aa13.76□□□□□ -0.21
HLA-C-201ENST00000376228 RPL28P46779 137 aaKnown RBP13.76□□□□□ -0.21
HLA-C-201ENST00000376228 KIAA1109Q2LD37 5005 aa13.75□□□□□ -0.21
HLA-C-201ENST00000376228 PSCAO43653 123 aa13.74□□□□□ -0.21
HLA-C-201ENST00000376228 TCL1BO95988 128 aa13.74□□□□□ -0.21
HLA-C-201ENST00000376228 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
HLA-C-201ENST00000376228 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
HLA-C-201ENST00000376228 Q6ZRN7 208 aaPredicted RBP13.74□□□□□ -0.21
HLA-C-201ENST00000376228 H3BMG7 143 aa13.73□□□□□ -0.21
HLA-C-201ENST00000376228 Q8NDZ9 215 aa13.72□□□□□ -0.21
HLA-C-201ENST00000376228 Q6ZRP5 223 aa13.71□□□□□ -0.21
HLA-C-201ENST00000376228 TMEM126AQ9H061 195 aa13.71□□□□□ -0.21
HLA-C-201ENST00000376228 CNBPP62633 177 aaKnown RBP13.7□□□□□ -0.22
HLA-C-201ENST00000376228 WFDC2Q14508 124 aa13.7□□□□□ -0.22
HLA-C-201ENST00000376228 F8W1H4 67 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 LECT2O14960 151 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 ATXN8Q156A1 80 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 XAGE1AQ9HD64 81 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 PRR3P79522 188 aaKnown RBP13.69□□□□□ -0.22
HLA-C-201ENST00000376228 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 SMIM11BQ8TCY0 68 aa13.69□□□□□ -0.22
HLA-C-201ENST00000376228 PRO0461Q9UI25 63 aa13.68□□□□□ -0.22
HLA-C-201ENST00000376228 HERC2O95714 4834 aa13.68□□□□□ -0.22
HLA-C-201ENST00000376228 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
HLA-C-201ENST00000376228 VPREB1P12018 145 aa13.67□□□□□ -0.22
HLA-C-201ENST00000376228 PLA2G2DQ9UNK4 145 aa13.66□□□□□ -0.22
HLA-C-201ENST00000376228 C16orf90A8MZG2 172 aa13.65□□□□□ -0.22
HLA-C-201ENST00000376228 LST1O00453 97 aa13.65□□□□□ -0.22
HLA-C-201ENST00000376228 DNAH5Q8TE73 4624 aa13.65□□□□□ -0.22
HLA-C-201ENST00000376228 LOC107984640A0A0U1RRK4 108 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 NCR3O14931 201 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 IGLV6-57P01721 117 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 KRTAP10-2P60368 255 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 H0YGX0 51 aa13.64□□□□□ -0.23
HLA-C-201ENST00000376228 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
HLA-C-201ENST00000376228 FUSP35637 526 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-C-201ENST00000376228 S100A7L2Q5SY68 101 aa13.63□□□□□ -0.23
HLA-C-201ENST00000376228 LRP1BQ9NZR2 4599 aa13.62□□□□□ -0.23
HLA-C-201ENST00000376228 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
HLA-C-201ENST00000376228 CLEC2BQ92478 149 aa13.62□□□□□ -0.23
HLA-C-201ENST00000376228 LINC01600Q96MT4 127 aa13.62□□□□□ -0.23
HLA-C-201ENST00000376228 M0R378 163 aa13.61□□□□□ -0.23
HLA-C-201ENST00000376228 RPL18AQ02543 176 aaKnown RBP13.61□□□□□ -0.23
HLA-C-201ENST00000376228 M0QXV9 152 aa13.6□□□□□ -0.23
HLA-C-201ENST00000376228 IGLV5-37A0A075B6J1 123 aa13.59□□□□□ -0.23
HLA-C-201ENST00000376228 TRACP01848 142 aa13.59□□□□□ -0.23
HLA-C-201ENST00000376228 RYR1P21817 5038 aa13.58□□□□□ -0.24
HLA-C-201ENST00000376228 A0A087WTM6 91 aa13.58□□□□□ -0.24
HLA-C-201ENST00000376228 CBY1Q9Y3M2 126 aa13.58□□□□□ -0.24
HLA-C-201ENST00000376228 SMCPP49901 116 aaPredicted RBP13.57□□□□□ -0.24
HLA-C-201ENST00000376228 PKIGQ9Y2B9 76 aa13.57□□□□□ -0.24
HLA-C-201ENST00000376228 C9JAW5 83 aa13.56□□□□□ -0.24
HLA-C-201ENST00000376228 C9orf163Q8N9P6 203 aa13.55□□□□□ -0.24
HLA-C-201ENST00000376228 TRBV10-3A0A0K0K1G6 114 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 SLC25A20O43772 301 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 FAM218AQ96MZ4 157 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 A0A1B0GX51 115 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 GAGE2BQ13066 116 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
HLA-C-201ENST00000376228 Q8N814 137 aa13.53□□□□□ -0.24
HLA-C-201ENST00000376228 H3BT86 120 aa13.52□□□□□ -0.25
HLA-C-201ENST00000376228 SERTAD4-AS1Q5TG53 156 aa13.52□□□□□ -0.25
HLA-C-201ENST00000376228 NKAPP1Q8N9T2 125 aa13.52□□□□□ -0.25
HLA-C-201ENST00000376228 APOBP04114 4563 aaKnown RBP13.51□□□□□ -0.25
HLA-C-201ENST00000376228 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.51□□□□□ -0.25
HLA-C-201ENST00000376228 TRAV23DV6A0A075B6W5 121 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms