RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 C11orf44Q8N8P7 122 aa8.9□□□□□ -0.98
PRPF4-201ENST00000374198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.984e-9■■■■□ 22.1
PRPF4-201ENST00000374198 ABCA2Q9BZC7 2435 aa8.9□□□□□ -0.99
PRPF4-201ENST00000374198 ESRGQ1W209 222 aa8.9□□□□□ -0.99
PRPF4-201ENST00000374198 LINC01356Q8N9X3 169 aa8.9□□□□□ -0.99
PRPF4-201ENST00000374198 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
PRPF4-201ENST00000374198 LOC100131303A0A0U1RQF7 123 aa8.89□□□□□ -0.99
PRPF4-201ENST00000374198 SCXQ7RTU7 201 aa8.89□□□□□ -0.99
PRPF4-201ENST00000374198 C1orf158Q8N1D5 194 aa8.89□□□□□ -0.99
PRPF4-201ENST00000374198 NSD1Q96L73 2696 aaPredicted RBP8.88□□□□□ -0.99
PRPF4-201ENST00000374198 B4DSR2 109 aa8.88□□□□□ -0.99
PRPF4-201ENST00000374198 BPY2O14599 106 aa8.88□□□□□ -0.99
PRPF4-201ENST00000374198 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
PRPF4-201ENST00000374198 Q8IZM0 81 aa8.88□□□□□ -0.99
PRPF4-201ENST00000374198 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
PRPF4-201ENST00000374198 SLURP1P55000 103 aa8.87□□□□□ -0.99
PRPF4-201ENST00000374198 MSMBP08118 114 aa8.86□□□□□ -0.99
PRPF4-201ENST00000374198 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
PRPF4-201ENST00000374198 PRYO14603 147 aa8.86□□□□□ -0.99
PRPF4-201ENST00000374198 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.99
PRPF4-201ENST00000374198 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
PRPF4-201ENST00000374198 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
PRPF4-201ENST00000374198 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
PRPF4-201ENST00000374198 Q6ZTC4 211 aa8.85□□□□□ -0.99
PRPF4-201ENST00000374198 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
PRPF4-201ENST00000374198 IGHV4-59P01825 116 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 NF1P21359 2839 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 DEFB136Q30KP8 78 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 NOP10Q9NPE3 64 aaKnown RBP8.84□□□□□ -0.99
PRPF4-201ENST00000374198 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
PRPF4-201ENST00000374198 COX17Q14061 63 aa8.83□□□□□ -1
PRPF4-201ENST00000374198 Q6ZQY7 126 aa8.83□□□□□ -1
PRPF4-201ENST00000374198 Q8NDZ9 215 aa8.83□□□□□ -1
PRPF4-201ENST00000374198 H3BQ85 93 aa8.82□□□□□ -1
PRPF4-201ENST00000374198 C18orf65Q6ZTR6 163 aa8.81□□□□□ -1
PRPF4-201ENST00000374198 OCR1Q9BZK8 76 aa8.81□□□□□ -1
PRPF4-201ENST00000374198 TRGV2A0A075B6R0 118 aa8.81□□□□□ -1
PRPF4-201ENST00000374198 Q6ZRU5 148 aa8.8□□□□□ -1
PRPF4-201ENST00000374198 STHQ8IWL8 128 aa8.8□□□□□ -1
PRPF4-201ENST00000374198 KHDC1LQ5JSQ8 128 aa8.79□□□□□ -1
PRPF4-201ENST00000374198 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
PRPF4-201ENST00000374198 DEFB114Q30KQ6 69 aa8.79□□□□□ -1
PRPF4-201ENST00000374198 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
PRPF4-201ENST00000374198 KIAA0087Q14695 138 aa8.78□□□□□ -1
PRPF4-201ENST00000374198 ODF3L2Q3SX64 289 aa8.78□□□□□ -1
PRPF4-201ENST00000374198 C9orf116Q5BN46 136 aaPredicted RBP8.78□□□□□ -1
PRPF4-201ENST00000374198 CD164L2Q6UWJ8 174 aa8.78□□□□□ -1
PRPF4-201ENST00000374198 Q8N9L7 120 aa8.78□□□□□ -1
PRPF4-201ENST00000374198 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
PRPF4-201ENST00000374198 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
PRPF4-201ENST00000374198 IGKV4-1P06312 121 aa8.77□□□□□ -1.01
PRPF4-201ENST00000374198 IGHV4-28A0A0C4DH34 117 aa8.76□□□□□ -1.01
PRPF4-201ENST00000374198 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
PRPF4-201ENST00000374198 IGLV6-57P01721 117 aa8.75□□□□□ -1.01
PRPF4-201ENST00000374198 Q1T7F1 81 aa8.75□□□□□ -1.01
PRPF4-201ENST00000374198 CLPSL2Q6UWE3 100 aa8.75□□□□□ -1.01
PRPF4-201ENST00000374198 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
PRPF4-201ENST00000374198 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
PRPF4-201ENST00000374198 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
PRPF4-201ENST00000374198 DAD1P61803 113 aa8.74□□□□□ -1.01
PRPF4-201ENST00000374198 Q6ZRP5 223 aa8.74□□□□□ -1.01
PRPF4-201ENST00000374198 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
PRPF4-201ENST00000374198 C16orf74Q96GX8 76 aa8.73□□□□□ -1.01
PRPF4-201ENST00000374198 COX7BP24311 80 aa8.73□□□□□ -1.01
PRPF4-201ENST00000374198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
PRPF4-201ENST00000374198 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
PRPF4-201ENST00000374198 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
PRPF4-201ENST00000374198 ATRQ13535 2644 aa8.71□□□□□ -1.02
PRPF4-201ENST00000374198 MDFIQ99750 246 aa8.71□□□□□ -1.02
PRPF4-201ENST00000374198 FSHBP01225 129 aa8.7□□□□□ -1.02
PRPF4-201ENST00000374198 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
PRPF4-201ENST00000374198 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
PRPF4-201ENST00000374198 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
PRPF4-201ENST00000374198 CCL24O00175 119 aa8.69□□□□□ -1.02
PRPF4-201ENST00000374198 C4orf3Q8WVX3 66 aa8.69□□□□□ -1.02
PRPF4-201ENST00000374198 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
PRPF4-201ENST00000374198 NOTCH3Q9UM47 2321 aa8.68□□□□□ -1.02
PRPF4-201ENST00000374198 KRTAP24-1Q3LI83 254 aa8.67□□□□□ -1.02
PRPF4-201ENST00000374198 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
PRPF4-201ENST00000374198 PSPHP1O15172 72 aa8.67□□□□□ -1.02
PRPF4-201ENST00000374198 CD164Q04900 197 aa8.67□□□□□ -1.02
PRPF4-201ENST00000374198 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
PRPF4-201ENST00000374198 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
PRPF4-201ENST00000374198 UNQ6190/PRO20217Q6UXQ8 127 aa8.66□□□□□ -1.02
PRPF4-201ENST00000374198 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
PRPF4-201ENST00000374198 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
PRPF4-201ENST00000374198 LCE6AA0A183 80 aa8.66□□□□□ -1.02
PRPF4-201ENST00000374198 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
PRPF4-201ENST00000374198 COL6A5A8TX70 2615 aa8.65□□□□□ -1.02
PRPF4-201ENST00000374198 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
PRPF4-201ENST00000374198 CUBNO60494 3623 aa8.65□□□□□ -1.02
PRPF4-201ENST00000374198 GYPEP15421 78 aa8.65□□□□□ -1.03
PRPF4-201ENST00000374198 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.03
PRPF4-201ENST00000374198 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
PRPF4-201ENST00000374198 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
PRPF4-201ENST00000374198 WNK1Q9H4A3 2382 aa8.64□□□□□ -1.03
PRPF4-201ENST00000374198 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms