RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 HAMPP81172 84 aa1.9□□□□□ -2.1
COL6A5-203ENST00000373157 ZCCHC13Q8WW36 166 aaKnown RBP1.9□□□□□ -2.1
COL6A5-203ENST00000373157 TTTY10Q9BZA0 68 aa1.9□□□□□ -2.1
COL6A5-203ENST00000373157 DOCK10Q96BY6 2186 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 KRTAP10-3P60369 221 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 TPRXLQ17RH7 258 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 Q6ZQY7 126 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 COA5Q86WW8 74 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 ANAPC11Q9NYG5 84 aa1.9□□□□□ -2.11
COL6A5-203ENST00000373157 ZNF831Q5JPB2 1677 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 IGIPA6NJ69 53 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 CPSF4LA6NMK7 179 aaKnown RBP1.89□□□□□ -2.11
COL6A5-203ENST00000373157 INE1O15225 51 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 COX6B1P14854 86 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 COX7BP24311 80 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 ZNF625Q96I27 306 aaPredicted RBP1.89□□□□□ -2.11
COL6A5-203ENST00000373157 Q96NJ1 140 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 TMEM167BQ9NRX6 74 aa1.89□□□□□ -2.11
COL6A5-203ENST00000373157 IGKV2-24A0A0C4DH68 120 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 ETDCA0A1B0GVM5 59 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 LOC730098B7Z3J9 87 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 MRPL33O75394 65 aaKnown RBP1.88□□□□□ -2.11
COL6A5-203ENST00000373157 NDUFA3O95167 84 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 LINC00315P59091 139 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 COL4A5P29400 1685 aa1.88□□□□□ -2.11
COL6A5-203ENST00000373157 CEP192Q8TEP8 1941 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 SDK1Q7Z5N4 2213 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 M0R2N4 97 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 LINC01590Q5TEZ4 76 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 KRTAP11-1Q8IUC1 163 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 LINC00472Q9H8W2 130 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 BRWD1Q9NSI6 2320 aa1.87□□□□□ -2.11
COL6A5-203ENST00000373157 CCL22O00626 93 aa1.86□□□□□ -2.11
COL6A5-203ENST00000373157 H3BSH0 61 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 ARHGAP5-AS1Q96IT6 56 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 CCL19Q99731 98 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 KCNQ1DNQ9H478 68 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 ATRXP46100 2492 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 SSC5DA1L4H1 1573 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 TFF3Q07654 80 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 SSBP3-AS1Q7Z2R9 100 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 SMIM11BQ8TCY0 68 aa1.85□□□□□ -2.11
COL6A5-203ENST00000373157 SEC16AO15027 2179 aa1.84□□□□□ -2.11
COL6A5-203ENST00000373157 PRRC2AP48634 2157 aaKnown RBP1.84□□□□□ -2.11
COL6A5-203ENST00000373157 LINC00959A0A1B0GUT2 108 aa1.84□□□□□ -2.12
COL6A5-203ENST00000373157 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.84□□□□□ -2.12
COL6A5-203ENST00000373157 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.12
COL6A5-203ENST00000373157 IAPPP10997 89 aa1.83□□□□□ -2.12
COL6A5-203ENST00000373157 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
COL6A5-203ENST00000373157 ALPK2Q86TB3 2170 aa1.83□□□□□ -2.12
COL6A5-203ENST00000373157 SHANK1Q9Y566 2161 aa1.83□□□□□ -2.12
COL6A5-203ENST00000373157 TNRC6CQ9HCJ0 1690 aaKnown RBP1.83□□□□□ -2.12
COL6A5-203ENST00000373157 SPTY2D1-AS1A0A0U1RR47 76 aa1.82□□□□□ -2.12
COL6A5-203ENST00000373157 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
COL6A5-203ENST00000373157 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
COL6A5-203ENST00000373157 PRR9Q5T870 116 aa1.82□□□□□ -2.12
COL6A5-203ENST00000373157 Q6ZRX8 168 aa1.82□□□□□ -2.12
COL6A5-203ENST00000373157 PRB2P02812 416 aaPredicted RBP1.82□□□□□ -2.12
COL6A5-203ENST00000373157 TNCP24821 2201 aa1.81□□□□□ -2.12
COL6A5-203ENST00000373157 RTTNQ86VV8 2226 aa1.81□□□□□ -2.12
COL6A5-203ENST00000373157 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
COL6A5-203ENST00000373157 COL4A2P08572 1712 aa1.81□□□□□ -2.12
COL6A5-203ENST00000373157 PLAC4Q8WY50 150 aa1.8□□□□□ -2.12
COL6A5-203ENST00000373157 DEFB131BA0A096LNP1 70 aa1.8□□□□□ -2.12
COL6A5-203ENST00000373157 RPS27P42677 84 aaKnown RBP1.8□□□□□ -2.12
COL6A5-203ENST00000373157 C10orf99Q6UWK7 81 aa1.8□□□□□ -2.12
COL6A5-203ENST00000373157 DEFB106AQ8N104 65 aa1.8□□□□□ -2.12
COL6A5-203ENST00000373157 KMT2BQ9UMN6 2715 aaPredicted RBP1.79□□□□□ -2.12
COL6A5-203ENST00000373157 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
COL6A5-203ENST00000373157 LY6G6CO95867 125 aa1.79□□□□□ -2.12
COL6A5-203ENST00000373157 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
COL6A5-203ENST00000373157 BPTFQ12830 3046 aa1.79□□□□□ -2.12
COL6A5-203ENST00000373157 COL4A4P53420 1690 aaPredicted RBP1.78□□□□□ -2.12
COL6A5-203ENST00000373157 CACNA1CQ13936 2221 aa1.78□□□□□ -2.12
COL6A5-203ENST00000373157 MED13LQ71F56 2210 aa1.78□□□□□ -2.12
COL6A5-203ENST00000373157 SPINK13Q1W4C9 94 aa1.78□□□□□ -2.12
COL6A5-203ENST00000373157 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
COL6A5-203ENST00000373157 KRTAP13-2Q52LG2 175 aa1.77□□□□□ -2.13
COL6A5-203ENST00000373157 SMIM2Q9BVW6 85 aa1.77□□□□□ -2.13
COL6A5-203ENST00000373157 LINC00158P58513 81 aa1.77□□□□□ -2.13
COL6A5-203ENST00000373157 KNTC1P50748 2209 aa1.76□□□□□ -2.13
COL6A5-203ENST00000373157 SRCAPQ6ZRS2 3230 aa1.76□□□□□ -2.13
COL6A5-203ENST00000373157 GVQW2A0A096LPI5 108 aaPredicted RBP1.76□□□□□ -2.13
COL6A5-203ENST00000373157 G3V318 75 aa1.76□□□□□ -2.13
COL6A5-203ENST00000373157 PRB1P04280 392 aa1.76□□□□□ -2.13
COL6A5-203ENST00000373157 UBE2DNLQ8IWF7 75 aa1.76□□□□□ -2.13
COL6A5-203ENST00000373157 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
COL6A5-203ENST00000373157 CRIPTQ9P021 101 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 A0A096LNT2 108 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 CRIP1P50238 77 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 KRTAP12-2P59991 146 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 IGFL1Q6UW32 110 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 LINC00575Q6W349 94 aa1.75□□□□□ -2.13
COL6A5-203ENST00000373157 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms