RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 HAMPP81172 84 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 FLNAP21333 2647 aaKnown RBP3.74□□□□□ -1.81
ATG4A-204ENST00000372246 TRGV4A0A0C4DH28 118 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 PLAC8L1A1L4L8 177 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.74□□□□□ -1.81
ATG4A-204ENST00000372246 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 C6orf223Q8N319 242 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 ZNF843Q8N446 348 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 Q8N9L7 120 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 OBSCN-AS1Q96MR7 158 aa3.74□□□□□ -1.81
ATG4A-204ENST00000372246 CCKP06307 115 aa3.73□□□□□ -1.81
ATG4A-204ENST00000372246 KRTAP10-9P60411 292 aa3.73□□□□□ -1.81
ATG4A-204ENST00000372246 C6orf99Q4VX62 202 aa3.73□□□□□ -1.81
ATG4A-204ENST00000372246 LINC00482Q8N8I6 264 aa3.73□□□□□ -1.81
ATG4A-204ENST00000372246 TRBV6-4A0A1B0GX49 114 aa3.73□□□□□ -1.81
ATG4A-204ENST00000372246 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 C10orf25Q5T742 122 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 Q6ZRU5 148 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 Q8N814 137 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 SERP1Q9Y6X1 66 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 TRRAPQ9Y4A5 3859 aa3.72□□□□□ -1.81
ATG4A-204ENST00000372246 PLA2G1BP04054 148 aaKnown RBP3.72□□□□□ -1.81
ATG4A-204ENST00000372246 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 LINC01356Q8N9X3 169 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 USP24Q9UPU5 2620 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 UNC79Q9P2D8 2635 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 A0A087WZ39 114 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 H0YGX0 51 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 LAMTOR3Q9UHA4 124 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
ATG4A-204ENST00000372246 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 A0A0U1RQV1 116 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 H7BZZ5 65 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 Q6YL49 198 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 COPS9Q8WXC6 57 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 XAGE1AQ9HD64 81 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 HIVEP2P31629 2446 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 F8WEM9 126 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 PRB2P02812 416 aaPredicted RBP3.7□□□□□ -1.82
ATG4A-204ENST00000372246 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
ATG4A-204ENST00000372246 PRR15Q8IV56 129 aa3.7□□□□□ -1.82
ATG4A-204ENST00000372246 TRBV10-1A0A0K0K1A3 114 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 LRCOL1A6NCL2 159 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 GYPEP15421 78 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 LINC01547P58512 204 aaPredicted RBP3.69□□□□□ -1.82
ATG4A-204ENST00000372246 Q6ZQY7 126 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 LINC01006Q8NI28 216 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 BBC3Q96PG8 261 aaPredicted RBP3.69□□□□□ -1.82
ATG4A-204ENST00000372246 UBR5O95071 2799 aaPredicted RBP3.69□□□□□ -1.82
ATG4A-204ENST00000372246 DAD1P61803 113 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
ATG4A-204ENST00000372246 CCL24O00175 119 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 LY6G6DO95868 133 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 Q6ZQT0 140 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 Q6ZVQ6 151 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 C4orf3Q8WVX3 66 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 F8P00451 2351 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 IGHV4-31P0DP07 118 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
ATG4A-204ENST00000372246 BAHCC1Q9P281 2608 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 ITPR2Q14571 2701 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 ANGP03950 147 aaKnown RBP3.67□□□□□ -1.82
ATG4A-204ENST00000372246 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 TEP1Q99973 2627 aaKnown RBP3.67□□□□□ -1.82
ATG4A-204ENST00000372246 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 BPY2O14599 106 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 HTN3P15516 51 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
ATG4A-204ENST00000372246 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
ATG4A-204ENST00000372246 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
ATG4A-204ENST00000372246 TMEM256-PLSCR3K7ERE1 68 aa3.66□□□□□ -1.82
ATG4A-204ENST00000372246 LINC00575Q6W349 94 aa3.66□□□□□ -1.82
ATG4A-204ENST00000372246 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
ATG4A-204ENST00000372246 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
ATG4A-204ENST00000372246 X6R8D5 127 aa3.66□□□□□ -1.82
ATG4A-204ENST00000372246 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
ATG4A-204ENST00000372246 TENM4Q6N022 2769 aa3.65□□□□□ -1.82
ATG4A-204ENST00000372246 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.83
ATG4A-204ENST00000372246 LINC00167Q96N53 147 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 NOTCH2Q04721 2471 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 IGHV4-28A0A0C4DH34 117 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 C3orf84H3BNL1 204 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms