RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 Q6ZRP5 223 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 IGHV1OR15-1A0A075B7D0 117 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 CXCL6P80162 114 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 NREPQ16612 68 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 C4orf3Q8WVX3 66 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 SORL1Q92673 2214 aa6.16□□□□□ -1.42
ATG4A-203ENST00000372232 RPL36AP83881 106 aaKnown RBP6.15□□□□□ -1.42
ATG4A-203ENST00000372232 CCDC168Q8NDH2 2452 aa6.15□□□□□ -1.42
ATG4A-203ENST00000372232 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
ATG4A-203ENST00000372232 LINC00588Q9Y4M8 146 aa6.15□□□□□ -1.42
ATG4A-203ENST00000372232 SONP18583 2426 aaKnown RBP6.15□□□□□ -1.43
ATG4A-203ENST00000372232 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 APOC4P55056 127 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 Q8N3U1 123 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 DEFB131AP59861 70 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 NF1P21359 2839 aa6.14□□□□□ -1.43
ATG4A-203ENST00000372232 FLNAP21333 2647 aaKnown RBP6.13□□□□□ -1.43
ATG4A-203ENST00000372232 LYRM9A8MSI8 78 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 A8MTW9 85 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 TMEM256-PLSCR3K7ERE1 68 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 M0R378 163 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 COX6A2Q02221 97 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 OTOGQ6ZRI0 2925 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 CUBNO60494 3623 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 DNAJC9-AS1A6NH13 148 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 Q6ZTI0 123 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 Q6ZVQ6 151 aa6.13□□□□□ -1.43
ATG4A-203ENST00000372232 Q6ZQT0 140 aa6.12□□□□□ -1.43
ATG4A-203ENST00000372232 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 UBE2BP63146 152 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 DEFB114Q30KQ6 69 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 NDUFS5O43920 106 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 HAMPP81172 84 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 ESM1Q9NQ30 184 aa6.11□□□□□ -1.43
ATG4A-203ENST00000372232 TRAV22A0A0B4J277 110 aa6.1□□□□□ -1.43
ATG4A-203ENST00000372232 LY6G6DO95868 133 aa6.1□□□□□ -1.43
ATG4A-203ENST00000372232 HTN1P15515 57 aa6.1□□□□□ -1.43
ATG4A-203ENST00000372232 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
ATG4A-203ENST00000372232 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
ATG4A-203ENST00000372232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-203ENST00000372232 KRTAP1-1Q07627 177 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 SYCNQ0VAF6 134 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 IGHV3OR16-12A0A075B7B8 117 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 TRBV10-1A0A0K0K1A3 114 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 BPY2O14599 106 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 PSPHP1O15172 72 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 PRM2P04554 102 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 IGHV4-30-4P0DP06 118 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 Q8N814 137 aa6.09□□□□□ -1.43
ATG4A-203ENST00000372232 INAFM1C9JVW0 142 aa6.08□□□□□ -1.44
ATG4A-203ENST00000372232 PHF5AQ7RTV0 110 aaKnown RBP6.08□□□□□ -1.44
ATG4A-203ENST00000372232 ACANP16112 2415 aa6.08□□□□□ -1.44
ATG4A-203ENST00000372232 SETD2Q9BYW2 2564 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-203ENST00000372232 CCL18P55774 89 aa6.07□□□□□ -1.44
ATG4A-203ENST00000372232 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
ATG4A-203ENST00000372232 NIPBLQ6KC79 2804 aaeCLIP6.07□□□□□ -1.44
ATG4A-203ENST00000372232 IGHV3-73A0A0B4J1V6 119 aa6.07□□□□□ -1.44
ATG4A-203ENST00000372232 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
ATG4A-203ENST00000372232 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
ATG4A-203ENST00000372232 MTORP42345 2549 aa6.06□□□□□ -1.44
ATG4A-203ENST00000372232 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
ATG4A-203ENST00000372232 INSP01308 110 aa6.06□□□□□ -1.44
ATG4A-203ENST00000372232 PROK1P58294 105 aa6.06□□□□□ -1.44
ATG4A-203ENST00000372232 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
ATG4A-203ENST00000372232 TRBV6-4A0A1B0GX49 114 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 A8MU10 97 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 M0R2N4 97 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 HIVEP1P15822 2718 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 WNK1Q9H4A3 2382 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 C9orf66Q5T8R8 295 aa6.05□□□□□ -1.44
ATG4A-203ENST00000372232 LRCOL1A6NCL2 159 aa6.04□□□□□ -1.44
ATG4A-203ENST00000372232 PDE6GP18545 87 aa6.04□□□□□ -1.44
ATG4A-203ENST00000372232 NTM-AS1Q6ZSK4 140 aa6.04□□□□□ -1.44
ATG4A-203ENST00000372232 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
ATG4A-203ENST00000372232 A6NN06 94 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 A8MUN3 132 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 UBE2AP49459 152 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 Q5VV11 94 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 LINC00269Q8N2A0 174 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 C16orf90A8MZG2 172 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 UBE2L6O14933 153 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 LINC00158P58513 81 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
ATG4A-203ENST00000372232 F8P00451 2351 aa6.02□□□□□ -1.45
ATG4A-203ENST00000372232 PSCAO43653 123 aa6.02□□□□□ -1.45
ATG4A-203ENST00000372232 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
ATG4A-203ENST00000372232 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
ATG4A-203ENST00000372232 K7EQD1 137 aa6.01□□□□□ -1.45
ATG4A-203ENST00000372232 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
ATG4A-203ENST00000372232 LCE6AA0A183 80 aa6□□□□□ -1.45
ATG4A-203ENST00000372232 NANOS2P60321 138 aaKnown RBP6□□□□□ -1.45
ATG4A-203ENST00000372232 TEP1Q99973 2627 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms