RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 K7EIL1 84 aa10.1□□□□□ -0.79
NDC1-201ENST00000371429 RTL8CO15255 209 aa10.09□□□□□ -0.79
NDC1-201ENST00000371429 FAM229AH3BQW9 127 aa10.09□□□□□ -0.79
NDC1-201ENST00000371429 K7ERS5 55 aa10.08□□□□□ -0.8
NDC1-201ENST00000371429 LINC01547P58512 204 aaPredicted RBP10.08□□□□□ -0.8
NDC1-201ENST00000371429 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
NDC1-201ENST00000371429 NDUFC1O43677 76 aa10.08□□□□□ -0.8
NDC1-201ENST00000371429 FAM240AA0A1B0GVK7 77 aa10.07□□□□□ -0.8
NDC1-201ENST00000371429 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
NDC1-201ENST00000371429 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
NDC1-201ENST00000371429 BPTFQ12830 3046 aa10.06□□□□□ -0.8
NDC1-201ENST00000371429 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
NDC1-201ENST00000371429 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
NDC1-201ENST00000371429 LINC00208Q96KT6 92 aa10.05□□□□□ -0.8
NDC1-201ENST00000371429 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
NDC1-201ENST00000371429 XGP55808 180 aa10.05□□□□□ -0.8
NDC1-201ENST00000371429 RETNLBQ9BQ08 111 aa10.04□□□□□ -0.8
NDC1-201ENST00000371429 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
NDC1-201ENST00000371429 PRR15LQ9BU68 103 aa10.04□□□□□ -0.8
NDC1-201ENST00000371429 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
NDC1-201ENST00000371429 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
NDC1-201ENST00000371429 DNAH10OSP0CZ25 163 aa10.02□□□□□ -0.81
NDC1-201ENST00000371429 KIAA0087Q14695 138 aa10.02□□□□□ -0.81
NDC1-201ENST00000371429 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
NDC1-201ENST00000371429 SPTSSBQ8NFR3 76 aa10.02□□□□□ -0.81
NDC1-201ENST00000371429 MOBPQ13875 183 aa10.01□□□□□ -0.81
NDC1-201ENST00000371429 KRTAP10-3P60369 221 aa10.01□□□□□ -0.81
NDC1-201ENST00000371429 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
NDC1-201ENST00000371429 A0A087WVE0 104 aa10.01□□□□□ -0.81
NDC1-201ENST00000371429 Q6ZRP5 223 aa10.01□□□□□ -0.81
NDC1-201ENST00000371429 C19orf73Q9NVV2 129 aa10□□□□□ -0.81
NDC1-201ENST00000371429 KRTAP1-3Q8IUG1 177 aa10□□□□□ -0.81
NDC1-201ENST00000371429 COX7CP15954 63 aa10□□□□□ -0.81
NDC1-201ENST00000371429 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
NDC1-201ENST00000371429 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
NDC1-201ENST00000371429 BRK1Q8WUW1 75 aa9.98□□□□□ -0.81
NDC1-201ENST00000371429 CRYGAP11844 174 aa9.98□□□□□ -0.81
NDC1-201ENST00000371429 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
NDC1-201ENST00000371429 TRAV7A0A075B6U4 112 aa9.97□□□□□ -0.81
NDC1-201ENST00000371429 V9GYY9 64 aa9.96□□□□□ -0.82
NDC1-201ENST00000371429 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.82
NDC1-201ENST00000371429 RANBP2P49792 3224 aaKnown RBP9.96□□□□□ -0.82
NDC1-201ENST00000371429 SOSTDC1Q6X4U4 206 aa9.95□□□□□ -0.82
NDC1-201ENST00000371429 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
NDC1-201ENST00000371429 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
NDC1-201ENST00000371429 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
NDC1-201ENST00000371429 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
NDC1-201ENST00000371429 Q6ZRX8 168 aa9.93□□□□□ -0.82
NDC1-201ENST00000371429 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
NDC1-201ENST00000371429 HCG22E2RYF7 251 aa9.93□□□□□ -0.82
NDC1-201ENST00000371429 ELOF1P60002 83 aaKnown RBP9.92□□□□□ -0.82
NDC1-201ENST00000371429 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
NDC1-201ENST00000371429 Q6Q795 121 aa9.91□□□□□ -0.82
NDC1-201ENST00000371429 TEP1Q99973 2627 aaKnown RBP9.91□□□□□ -0.82
NDC1-201ENST00000371429 SVIPQ8NHG7 77 aa9.91□□□□□ -0.82
NDC1-201ENST00000371429 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
NDC1-201ENST00000371429 H0Y9P7 68 aa9.9□□□□□ -0.82
NDC1-201ENST00000371429 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
NDC1-201ENST00000371429 SPINK1P00995 79 aa9.89□□□□□ -0.83
NDC1-201ENST00000371429 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 BCE1O60756 84 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 Q8NBF4 154 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 CHD9Q3L8U1 2897 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 CCDC179H3BU77 68 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 IGKV2-30P06310 120 aa9.88□□□□□ -0.83
NDC1-201ENST00000371429 C5orf42Q9H799 3197 aa9.87□□□□□ -0.83
NDC1-201ENST00000371429 A6NED7 52 aa9.87□□□□□ -0.83
NDC1-201ENST00000371429 RPL37AP61513 92 aaKnown RBP9.85□□□□□ -0.83
NDC1-201ENST00000371429 LINC00476Q8WZB0 136 aa9.85□□□□□ -0.83
NDC1-201ENST00000371429 J3QL48 77 aa9.85□□□□□ -0.83
NDC1-201ENST00000371429 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
NDC1-201ENST00000371429 FAM218AQ96MZ4 157 aa9.84□□□□□ -0.83
NDC1-201ENST00000371429 ZNF292O60281 2723 aa9.84□□□□□ -0.83
NDC1-201ENST00000371429 FAM168BA1KXE4 195 aa9.83□□□□□ -0.84
NDC1-201ENST00000371429 VPREB1P12018 145 aa9.83□□□□□ -0.84
NDC1-201ENST00000371429 CXCL6P80162 114 aa9.83□□□□□ -0.84
NDC1-201ENST00000371429 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
NDC1-201ENST00000371429 STAB1Q9NY15 2570 aa9.82□□□□□ -0.84
NDC1-201ENST00000371429 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
NDC1-201ENST00000371429 PCNTO95613 3336 aa9.82□□□□□ -0.84
NDC1-201ENST00000371429 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
NDC1-201ENST00000371429 A0A1B0GW54 56 aa9.8□□□□□ -0.84
NDC1-201ENST00000371429 TMEM254Q8TBM7 123 aa9.8□□□□□ -0.84
NDC1-201ENST00000371429 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
NDC1-201ENST00000371429 A0A087WTM6 91 aa9.79□□□□□ -0.84
NDC1-201ENST00000371429 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
NDC1-201ENST00000371429 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
NDC1-201ENST00000371429 HTTP42858 3142 aa9.79□□□□□ -0.84
NDC1-201ENST00000371429 IGLV6-57P01721 117 aa9.76□□□□□ -0.85
NDC1-201ENST00000371429 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
NDC1-201ENST00000371429 C15orf56Q8N910 161 aa9.76□□□□□ -0.85
NDC1-201ENST00000371429 TP53AIP1Q9HCN2 124 aa9.75□□□□□ -0.85
NDC1-201ENST00000371429 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
NDC1-201ENST00000371429 LINC00313P59037 77 aa9.75□□□□□ -0.85
NDC1-201ENST00000371429 LITAFQ99732 161 aa9.74□□□□□ -0.85
NDC1-201ENST00000371429 C9orf163Q8N9P6 203 aa9.74□□□□□ -0.85
NDC1-201ENST00000371429 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
NDC1-201ENST00000371429 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
NDC1-201ENST00000371429 Q6ZQT0 140 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms