RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 VPS13CQ709C8 3753 aa12.04□□□□□ -0.48
CHTOP-201ENST00000368686 REG3AQ06141 175 aa12.03□□□□□ -0.48
CHTOP-201ENST00000368686 C1orf64Q8NEQ6 169 aa12.03□□□□□ -0.48
CHTOP-201ENST00000368686 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
CHTOP-201ENST00000368686 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
CHTOP-201ENST00000368686 DEFB130BP0DP73 79 aa12.02□□□□□ -0.49
CHTOP-201ENST00000368686 DEFB130AP0DP74 79 aa12.02□□□□□ -0.49
CHTOP-201ENST00000368686 FSHBP01225 129 aa12.01□□□□□ -0.49
CHTOP-201ENST00000368686 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
CHTOP-201ENST00000368686 CYSRT1A8MQ03 144 aa12□□□□□ -0.49
CHTOP-201ENST00000368686 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
CHTOP-201ENST00000368686 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
CHTOP-201ENST00000368686 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
CHTOP-201ENST00000368686 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
CHTOP-201ENST00000368686 CACNA1AO00555 2505 aa11.98□□□□□ -0.49
CHTOP-201ENST00000368686 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
CHTOP-201ENST00000368686 LRCOL1A6NCL2 159 aa11.98□□□□□ -0.49
CHTOP-201ENST00000368686 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
CHTOP-201ENST00000368686 MAP1AP78559 2803 aaPredicted RBP11.98□□□□□ -0.49
CHTOP-201ENST00000368686 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
CHTOP-201ENST00000368686 ATRXP46100 2492 aa11.97□□□□□ -0.49
CHTOP-201ENST00000368686 A0A096LPF7 62 aa11.97□□□□□ -0.49
CHTOP-201ENST00000368686 ESM1Q9NQ30 184 aa11.97□□□□□ -0.49
CHTOP-201ENST00000368686 ZCCHC13Q8WW36 166 aaKnown RBP11.96□□□□□ -0.49
CHTOP-201ENST00000368686 TRAV22A0A0B4J277 110 aa11.95□□□□□ -0.5
CHTOP-201ENST00000368686 CD164Q04900 197 aa11.95□□□□□ -0.5
CHTOP-201ENST00000368686 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
CHTOP-201ENST00000368686 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
CHTOP-201ENST00000368686 CEP295Q9C0D2 2601 aa11.94□□□□□ -0.5
CHTOP-201ENST00000368686 PSPHP1O15172 72 aa11.94□□□□□ -0.5
CHTOP-201ENST00000368686 LINC00528Q8N1L1 170 aa11.94□□□□□ -0.5
CHTOP-201ENST00000368686 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
CHTOP-201ENST00000368686 C19orf73Q9NVV2 129 aa11.94□□□□□ -0.5
CHTOP-201ENST00000368686 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
CHTOP-201ENST00000368686 CR1P17927 2039 aa11.92□□□□□ -0.5
CHTOP-201ENST00000368686 A0A1B0GW54 56 aa11.91□□□□□ -0.5
CHTOP-201ENST00000368686 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
CHTOP-201ENST00000368686 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
CHTOP-201ENST00000368686 MAPK1IP1LQ8NDC0 245 aa11.9□□□□□ -0.5
CHTOP-201ENST00000368686 ETDCA0A1B0GVM5 59 aa11.89□□□□□ -0.51
CHTOP-201ENST00000368686 M0R378 163 aa11.89□□□□□ -0.51
CHTOP-201ENST00000368686 VPREB1P12018 145 aa11.89□□□□□ -0.51
CHTOP-201ENST00000368686 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
CHTOP-201ENST00000368686 PSCAO43653 123 aa11.88□□□□□ -0.51
CHTOP-201ENST00000368686 IGLV5-48A0A075B6I7 105 aa11.85□□□□□ -0.51
CHTOP-201ENST00000368686 SPG11Q96JI7 2443 aa11.85□□□□□ -0.51
CHTOP-201ENST00000368686 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
CHTOP-201ENST00000368686 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.84□□□□□ -0.51
CHTOP-201ENST00000368686 IGLV1-51P01701 117 aa11.84□□□□□ -0.51
CHTOP-201ENST00000368686 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
CHTOP-201ENST00000368686 NDUFB1O75438 58 aa11.83□□□□□ -0.52
CHTOP-201ENST00000368686 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
CHTOP-201ENST00000368686 A8MUN3 132 aa11.83□□□□□ -0.52
CHTOP-201ENST00000368686 UBE2BP63146 152 aa11.83□□□□□ -0.52
CHTOP-201ENST00000368686 PRR34Q9NV39 138 aa11.81□□□□□ -0.52
CHTOP-201ENST00000368686 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
CHTOP-201ENST00000368686 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
CHTOP-201ENST00000368686 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
CHTOP-201ENST00000368686 CHD8Q9HCK8 2581 aa11.79□□□□□ -0.52
CHTOP-201ENST00000368686 IGF2RP11717 2491 aa11.79□□□□□ -0.52
CHTOP-201ENST00000368686 Q8N377 158 aa11.79□□□□□ -0.52
CHTOP-201ENST00000368686 Q5VV11 94 aa11.78□□□□□ -0.52
CHTOP-201ENST00000368686 PRR4Q16378 134 aa11.77□□□□□ -0.52
CHTOP-201ENST00000368686 MRPL55Q7Z7F7 128 aaKnown RBP11.77□□□□□ -0.52
CHTOP-201ENST00000368686 RETNQ9HD89 108 aa11.77□□□□□ -0.52
CHTOP-201ENST00000368686 X6R8D5 127 aa11.77□□□□□ -0.52
CHTOP-201ENST00000368686 A0A1W2PNM2 257 aa11.77□□□□□ -0.53
CHTOP-201ENST00000368686 UBE2AP49459 152 aa11.77□□□□□ -0.53
CHTOP-201ENST00000368686 EGFEM1PQ0D2K5 195 aa11.77□□□□□ -0.53
CHTOP-201ENST00000368686 ACACBO00763 2458 aa11.77□□□□□ -0.53
CHTOP-201ENST00000368686 NBPF19A0A087WUL8 3843 aa11.77□□□□□ -0.53
CHTOP-201ENST00000368686 DEFB105AQ8NG35 78 aa11.76□□□□□ -0.53
CHTOP-201ENST00000368686 JMJD1CQ15652 2540 aa11.76□□□□□ -0.53
CHTOP-201ENST00000368686 DSCR10P59022 87 aa11.76□□□□□ -0.53
CHTOP-201ENST00000368686 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 LELP1Q5T871 98 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 ST20-AS1Q8NBB2 130 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 CAMK2N2Q96S95 79 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 KTN1-AS1Q86SY8 53 aa11.75□□□□□ -0.53
CHTOP-201ENST00000368686 SETXQ7Z333 2677 aaKnown RBP11.74□□□□□ -0.53
CHTOP-201ENST00000368686 Q8NBF4 154 aa11.74□□□□□ -0.53
CHTOP-201ENST00000368686 K7EQZ3 153 aa11.73□□□□□ -0.53
CHTOP-201ENST00000368686 LINC00588Q9Y4M8 146 aa11.73□□□□□ -0.53
CHTOP-201ENST00000368686 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
CHTOP-201ENST00000368686 C1orf137Q5JT78 98 aa11.72□□□□□ -0.53
CHTOP-201ENST00000368686 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
CHTOP-201ENST00000368686 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
CHTOP-201ENST00000368686 SPRR4Q96PI1 79 aa11.71□□□□□ -0.53
CHTOP-201ENST00000368686 ITPR1Q14643 2758 aa11.71□□□□□ -0.53
CHTOP-201ENST00000368686 A8MU10 97 aa11.71□□□□□ -0.54
CHTOP-201ENST00000368686 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
CHTOP-201ENST00000368686 TNP2Q05952 138 aa11.7□□□□□ -0.54
CHTOP-201ENST00000368686 CHKB-CPT1BH3BT56 60 aa11.69□□□□□ -0.54
CHTOP-201ENST00000368686 MP68P56378 58 aa11.69□□□□□ -0.54
CHTOP-201ENST00000368686 EPG5Q9HCE0 2579 aa11.69□□□□□ -0.54
CHTOP-201ENST00000368686 ZANQ9Y493 2812 aa11.68□□□□□ -0.54
CHTOP-201ENST00000368686 DHRS4-AS1Q9P1J3 65 aa11.68□□□□□ -0.54
CHTOP-201ENST00000368686 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
CHTOP-201ENST00000368686 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms