RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PFN2P35080 140 aa7.37□□□□□ -1.23
TPM3-212ENST00000368533 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
TPM3-212ENST00000368533 Q6ZTC4 211 aa7.37□□□□□ -1.23
TPM3-212ENST00000368533 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
TPM3-212ENST00000368533 K7EIL1 84 aa7.36□□□□□ -1.23
TPM3-212ENST00000368533 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
TPM3-212ENST00000368533 COX7B2Q8TF08 81 aa7.36□□□□□ -1.23
TPM3-212ENST00000368533 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
TPM3-212ENST00000368533 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
TPM3-212ENST00000368533 TRBV6-8A0A0A6YYG3 113 aa7.35□□□□□ -1.23
TPM3-212ENST00000368533 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
TPM3-212ENST00000368533 NCR3O14931 201 aa7.35□□□□□ -1.23
TPM3-212ENST00000368533 SLPIP03973 132 aa7.35□□□□□ -1.23
TPM3-212ENST00000368533 MALP21145 153 aa7.35□□□□□ -1.23
TPM3-212ENST00000368533 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
TPM3-212ENST00000368533 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
TPM3-212ENST00000368533 A0A087WYN8 130 aa7.34□□□□□ -1.23
TPM3-212ENST00000368533 XCL1P47992 114 aa7.34□□□□□ -1.23
TPM3-212ENST00000368533 LINC00612Q8N6U2 182 aa7.34□□□□□ -1.23
TPM3-212ENST00000368533 CRPP02741 224 aa7.34□□□□□ -1.24
TPM3-212ENST00000368533 C6orf226Q5I0X4 101 aa7.33□□□□□ -1.24
TPM3-212ENST00000368533 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
TPM3-212ENST00000368533 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
TPM3-212ENST00000368533 LYSTQ99698 3801 aa7.32□□□□□ -1.24
TPM3-212ENST00000368533 IGLV10-54A0A075B6I4 117 aa7.32□□□□□ -1.24
TPM3-212ENST00000368533 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
TPM3-212ENST00000368533 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
TPM3-212ENST00000368533 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
TPM3-212ENST00000368533 GHRHP01286 108 aa7.32□□□□□ -1.24
TPM3-212ENST00000368533 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
TPM3-212ENST00000368533 TRAV13-2A0A0B4J235 113 aa7.3□□□□□ -1.24
TPM3-212ENST00000368533 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
TPM3-212ENST00000368533 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
TPM3-212ENST00000368533 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
TPM3-212ENST00000368533 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
TPM3-212ENST00000368533 LECT2O14960 151 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 SS18Q15532 418 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 CSMD3Q7Z407 3707 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 DNAH9Q9NYC9 4486 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 ANGP03950 147 aaKnown RBP7.28□□□□□ -1.24
TPM3-212ENST00000368533 CCL18P55774 89 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 KPRPQ5T749 579 aaPredicted RBP7.28□□□□□ -1.24
TPM3-212ENST00000368533 ENHOQ6UWT2 76 aa7.28□□□□□ -1.24
TPM3-212ENST00000368533 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
TPM3-212ENST00000368533 FAM236DA0A1B0GTK5 79 aa7.27□□□□□ -1.24
TPM3-212ENST00000368533 FAM236CP0DP71 79 aa7.27□□□□□ -1.24
TPM3-212ENST00000368533 Q6JHZ5 121 aa7.27□□□□□ -1.24
TPM3-212ENST00000368533 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.24
TPM3-212ENST00000368533 SNURFQ9Y675 71 aa7.27□□□□□ -1.24
TPM3-212ENST00000368533 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
TPM3-212ENST00000368533 PRO0628Q9UI54 55 aa7.27□□□□□ -1.25
TPM3-212ENST00000368533 A0A087WZ39 114 aa7.27□□□□□ -1.25
TPM3-212ENST00000368533 LINC00474Q9P2X8 69 aa7.27□□□□□ -1.25
TPM3-212ENST00000368533 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
TPM3-212ENST00000368533 TGP01266 2768 aa7.26□□□□□ -1.25
TPM3-212ENST00000368533 SMIM11BQ8TCY0 68 aa7.26□□□□□ -1.25
TPM3-212ENST00000368533 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
TPM3-212ENST00000368533 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
TPM3-212ENST00000368533 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
TPM3-212ENST00000368533 IBA57-AS1B1ANH7 110 aa7.25□□□□□ -1.25
TPM3-212ENST00000368533 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
TPM3-212ENST00000368533 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
TPM3-212ENST00000368533 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
TPM3-212ENST00000368533 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
TPM3-212ENST00000368533 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
TPM3-212ENST00000368533 RMI2Q96E14 147 aa7.23□□□□□ -1.25
TPM3-212ENST00000368533 ESRGQ1W209 222 aa7.22□□□□□ -1.25
TPM3-212ENST00000368533 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
TPM3-212ENST00000368533 H7BZZ5 65 aa7.21□□□□□ -1.25
TPM3-212ENST00000368533 NDUFC2O95298 119 aa7.21□□□□□ -1.26
TPM3-212ENST00000368533 REG3AQ06141 175 aa7.21□□□□□ -1.26
TPM3-212ENST00000368533 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
TPM3-212ENST00000368533 CHCHD10Q8WYQ3 142 aaPredicted RBP7.21□□□□□ -1.26
TPM3-212ENST00000368533 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
TPM3-212ENST00000368533 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
TPM3-212ENST00000368533 H0YGX0 51 aa7.19□□□□□ -1.26
TPM3-212ENST00000368533 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
TPM3-212ENST00000368533 LELP1Q5T871 98 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 Q8IZM0 81 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 TRAV10A0A0B4J240 114 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 F8WEM9 126 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 J3QL48 77 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 SEC61GP60059 68 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
TPM3-212ENST00000368533 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
TPM3-212ENST00000368533 F8WDY8 70 aa7.17□□□□□ -1.26
TPM3-212ENST00000368533 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
TPM3-212ENST00000368533 CCKP06307 115 aa7.17□□□□□ -1.26
TPM3-212ENST00000368533 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
TPM3-212ENST00000368533 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 M0R2N4 97 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
TPM3-212ENST00000368533 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
TPM3-212ENST00000368533 HAMPP81172 84 aa7.15□□□□□ -1.27
TPM3-212ENST00000368533 C6orf223Q8N319 242 aa7.15□□□□□ -1.27
TPM3-212ENST00000368533 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
TPM3-212ENST00000368533 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms