RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
TPM3-210ENST00000368530 CFC1P0CG37 223 aa6.59□□□□□ -1.35
TPM3-210ENST00000368530 Q8IZM0 81 aa6.59□□□□□ -1.35
TPM3-210ENST00000368530 Q9HAA7 133 aa6.59□□□□□ -1.35
TPM3-210ENST00000368530 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 DNAH10OSP0CZ25 163 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 PFN2P35080 140 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 LINC00158P58513 81 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 CKS1BP61024 79 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 Q5VSD8 79 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
TPM3-210ENST00000368530 A0A087WTM6 91 aa6.57□□□□□ -1.36
TPM3-210ENST00000368530 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
TPM3-210ENST00000368530 KIAA0087Q14695 138 aa6.57□□□□□ -1.36
TPM3-210ENST00000368530 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
TPM3-210ENST00000368530 IGKV2D-24A0A075B6R9 120 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 H7C2G1 150 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 IFITM1P13164 125 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 MIR7-3HGQ8N6C7 128 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 C1orf43Q9BWL3 253 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
TPM3-210ENST00000368530 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
TPM3-210ENST00000368530 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.55□□□□□ -1.36
TPM3-210ENST00000368530 TSPAN13O95857 204 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 HIGD2BQ4VC39 106 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 KRTAP26-1Q6PEX3 210 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
TPM3-210ENST00000368530 FABP2P12104 132 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
TPM3-210ENST00000368530 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 CXCL5P42830 114 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 UBE2V1Q13404 147 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 Q1RN00 199 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
TPM3-210ENST00000368530 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
TPM3-210ENST00000368530 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
TPM3-210ENST00000368530 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
TPM3-210ENST00000368530 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
TPM3-210ENST00000368530 LOC107984156A0A0G2JMH3 177 aa6.52□□□□□ -1.37
TPM3-210ENST00000368530 K7EP34 96 aa6.52□□□□□ -1.37
TPM3-210ENST00000368530 ARL17AQ8IVW1 177 aa6.52□□□□□ -1.37
TPM3-210ENST00000368530 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.37
TPM3-210ENST00000368530 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
TPM3-210ENST00000368530 PSMB2P49721 201 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 HAMPP81172 84 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 XP32Q5T750 250 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 GTF2H5Q6ZYL4 71 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 C15orf56Q8N910 161 aa6.51□□□□□ -1.37
TPM3-210ENST00000368530 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
TPM3-210ENST00000368530 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
TPM3-210ENST00000368530 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
TPM3-210ENST00000368530 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
TPM3-210ENST00000368530 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
TPM3-210ENST00000368530 SCGB1C2P0DMR2 95 aa6.49□□□□□ -1.37
TPM3-210ENST00000368530 RMI2Q96E14 147 aa6.49□□□□□ -1.37
TPM3-210ENST00000368530 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
TPM3-210ENST00000368530 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
TPM3-210ENST00000368530 COX17Q14061 63 aa6.48□□□□□ -1.37
TPM3-210ENST00000368530 LECT2O14960 151 aa6.47□□□□□ -1.37
TPM3-210ENST00000368530 TRIAP1O43715 76 aa6.47□□□□□ -1.37
TPM3-210ENST00000368530 Q6ZRU5 148 aa6.47□□□□□ -1.37
TPM3-210ENST00000368530 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 GVQW2A0A096LPI5 108 aaPredicted RBP6.46□□□□□ -1.37
TPM3-210ENST00000368530 USP17L23D6RBM5 183 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 H3BMG7 143 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 IGKV2D-28P01615 120 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.37
TPM3-210ENST00000368530 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
TPM3-210ENST00000368530 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 Q8N814 137 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 TCL1BO95988 128 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 Q6ZSA8 131 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 OR13C6PQ8NH95 151 aa6.45□□□□□ -1.38
TPM3-210ENST00000368530 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
TPM3-210ENST00000368530 NCR3O14931 201 aa6.44□□□□□ -1.38
TPM3-210ENST00000368530 SYCNQ0VAF6 134 aa6.44□□□□□ -1.38
TPM3-210ENST00000368530 Q8NDZ9 215 aa6.44□□□□□ -1.38
TPM3-210ENST00000368530 XAGE1AQ9HD64 81 aa6.44□□□□□ -1.38
TPM3-210ENST00000368530 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
TPM3-210ENST00000368530 PSCAO43653 123 aa6.43□□□□□ -1.38
TPM3-210ENST00000368530 WFDC2Q14508 124 aa6.43□□□□□ -1.38
TPM3-210ENST00000368530 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
TPM3-210ENST00000368530 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
TPM3-210ENST00000368530 COX6CP09669 75 aa6.42□□□□□ -1.38
TPM3-210ENST00000368530 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
TPM3-210ENST00000368530 CARD19Q96LW7 228 aa6.42□□□□□ -1.38
TPM3-210ENST00000368530 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms