RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 PRO1854Q9UHT4 67 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 LY6G6CO95867 125 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 UBE2D3P61077 147 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 UBE2D2P62837 147 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 ZNF826PQ6ZT77 177 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 NDUFA11Q86Y39 141 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 C1orf64Q8NEQ6 169 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 GNG13Q9P2W3 67 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 TIMM9Q9Y5J7 89 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 PKD1P98161 4303 aa3.28□□□□□ -1.88
ECHDC1-204ENST00000368292 A0A0B4J2C4 111 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 MYMXA0A1B0GTQ4 84 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 IQCF6A8MYZ5 107 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 HMGN2P05204 90 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 LYZL1Q6UWQ5 148 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 Q6ZQT0 140 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 LYZL2Q7Z4W2 148 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 Q8N6K4 173 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 IFI27L1Q96BM0 104 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 FAM167A-AS1Q96KT0 104 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 ZNF355PQ9NSJ1 428 aa3.27□□□□□ -1.89
ECHDC1-204ENST00000368292 KIAA2026Q5HYC2 2103 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 TRBV7-3A0A075B6L6 115 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 C2orf70A6NJV1 201 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 PRB4P10163 310 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 DEFA4P12838 97 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 FAM229BQ4G0N7 80 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
ECHDC1-204ENST00000368292 MYCBP2O75592 4640 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 TRAV22A0A0B4J277 110 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 H7C2G1 150 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 DNAH10OSP0CZ25 163 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 MGST1P10620 155 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 ZNRD1Q9P1U0 126 aa3.25□□□□□ -1.89
ECHDC1-204ENST00000368292 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 IGLV3-32A0A0A0MS00 114 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 FAM223BA6NKX1 122 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 CEBPZOSA8MTT3 80 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 C17orf98A8MV24 154 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 F8WEM9 126 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 H3BVH4 76 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 COX6CP09669 75 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 MIFP14174 115 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 ZNF22P17026 224 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 EDDM3BP56851 147 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 PLGLAQ15195 96 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 Q6JHZ5 121 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 ZNF818PQ6ZRF7 136 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-204ENST00000368292 APOBP04114 4563 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 DNAH6Q9C0G6 4158 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 IGKV1D-37A0A075B6S9 117 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 IGKV1OR2-108A0A075B7D4 117 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 TMEM30CPA0ZSE6 113 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 H3BPC8 53 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 SFTA2Q6UW10 78 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 ZCCHC23Q6ZST2 131 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 C16orf74Q96GX8 76 aa3.23□□□□□ -1.89
ECHDC1-204ENST00000368292 IGKV1D-42A0A075B6H8 117 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 TMSB15BA0A087X1C1 80 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 SDHAF1A6NFY7 115 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 A8MUU9 505 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 IGKV3-15P01624 115 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 Q1RN00 199 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 HIGD2BQ4VC39 106 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 Q5VV11 94 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 SMIM4Q8WVI0 70 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 PPP1R1CQ8WVI7 109 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 TMEM14AQ9Y6G1 99 aa3.22□□□□□ -1.89
ECHDC1-204ENST00000368292 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 FLG2Q5D862 2391 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 ZNF815PA8K554 130 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 E7EUB6 86 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 CHKB-CPT1BH3BT56 60 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 PRH1P02810 166 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 DSCR10P59022 87 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 MOBPQ13875 183 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 ATP5EP2Q5VTU8 51 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 NMES1Q9C002 83 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 AGRNO00468 2067 aa3.21□□□□□ -1.9
ECHDC1-204ENST00000368292 A0A087WSZ3 146 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms