RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 C22orf24Q9Y442 160 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 PPBPP02775 128 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 S100A8P05109 93 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 CKS1BP61024 79 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 C6orf226Q5I0X4 101 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 TMEM136Q6ZRR5 245 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 ORMDL3Q8N138 153 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 C2orf88Q9BSF0 95 aa3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 CARHSP1Q9Y2V2 147 aaKnown RBP3.02□□□□□ -1.93
RNU4-4P-201ENST00000364588 NUPR1O60356 82 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 Q6ZN92 141 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 LINC01561Q8N1V8 128 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 VCX2Q9H322 139 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 MAP1LC3AQ9H492 121 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 PRO0461Q9UI25 63 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 CYSLTR1Q9Y271 337 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
RNU4-4P-201ENST00000364588 BCE1O60756 84 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 CRYGAP11844 174 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 RPL28P46779 137 aaKnown RBP3□□□□□ -1.93
RNU4-4P-201ENST00000364588 PEA15Q15121 130 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 Q8IZM0 81 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 AMELXQ99217 191 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 CDKN2A-AS1Q9UH64 79 aa3□□□□□ -1.93
RNU4-4P-201ENST00000364588 IGIPA6NJ69 53 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 F8VRH5 84 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 HERVK_113P63121 156 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 ATP5L2Q7Z4Y8 100 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 Q8N8P6 123 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 LINC00167Q96N53 147 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 GEMIN7Q9H840 131 aaKnown RBP2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 TP73-AS1Q9UF72 201 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 LAMTOR2Q9Y2Q5 125 aa2.99□□□□□ -1.93
RNU4-4P-201ENST00000364588 SCO1O75880 301 aa2.98□□□□□ -1.93
RNU4-4P-201ENST00000364588 UBE2AP49459 152 aa2.98□□□□□ -1.93
RNU4-4P-201ENST00000364588 RAB5BP61020 215 aa2.98□□□□□ -1.93
RNU4-4P-201ENST00000364588 ORMDL2Q53FV1 153 aa2.98□□□□□ -1.93
RNU4-4P-201ENST00000364588 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
RNU4-4P-201ENST00000364588 IGKV2-28A0A075B6P5 120 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 IGKV2D-28P01615 120 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 CXCL5P42830 114 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 SEC11AP67812 179 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 PRLHP81277 87 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 KRTAP13-1Q8IUC0 172 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 LINC00304Q8N9R0 145 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 COX7B2Q8TF08 81 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
RNU4-4P-201ENST00000364588 IGKV2D-26A0A0A0MRZ7 120 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 A0A1B0GVG6 124 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 K7EMI3 77 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 SPINK8P0C7L1 97 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 ADCYAP1P18509 176 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 PDZD11Q5EBL8 140 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 TOMM6Q96B49 74 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 NXT2Q9NPJ8 142 aaKnown RBP2.96□□□□□ -1.94
RNU4-4P-201ENST00000364588 TINCRA0A1B0GVN0 87 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 TMEM238C9JI98 176 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 MT-ND4LP03901 98 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 G0S2P27469 103 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 PFN2P35080 140 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 TPRXLQ17RH7 258 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 FAM229BQ4G0N7 80 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 Q6ZVH6 145 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 ERASQ7Z444 233 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 FAM19A1Q7Z5A9 133 aa2.95□□□□□ -1.94
RNU4-4P-201ENST00000364588 ATP5LO75964 103 aa2.94□□□□□ -1.94
RNU4-4P-201ENST00000364588 C3orf22Q8N5N4 141 aa2.94□□□□□ -1.94
RNU4-4P-201ENST00000364588 TMEM126AQ9H061 195 aa2.94□□□□□ -1.94
RNU4-4P-201ENST00000364588 PPDPFQ9H3Y8 114 aa2.94□□□□□ -1.94
RNU4-4P-201ENST00000364588 CST9LQ9H4G1 147 aa2.94□□□□□ -1.94
RNU4-4P-201ENST00000364588 M0R378 163 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 RAB14P61106 215 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 PMVKQ15126 192 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 CBLN2Q8IUK8 224 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 Q8NDZ9 215 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 PLEKHB2Q96CS7 222 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 HIGD2AQ9BW72 106 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 SND1-IT1Q9HBX3 110 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
RNU4-4P-201ENST00000364588 H3BRM9 83 aa2.92□□□□□ -1.94
RNU4-4P-201ENST00000364588 NDUFA6P56556 154 aa2.92□□□□□ -1.94
RNU4-4P-201ENST00000364588 ERG28Q9UKR5 140 aa2.92□□□□□ -1.94
RNU4-4P-201ENST00000364588 ZNF22P17026 224 aaPredicted RBP2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 CXCL6P80162 114 aa2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 FA2HQ7L5A8 372 aa2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 DAND5Q8N907 189 aa2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 SMCO4Q9NRQ5 59 aa2.91□□□□□ -1.94
RNU4-4P-201ENST00000364588 A0A0U1RRA0 63 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms