RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 DEFB104AQ8WTQ1 72 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 IGKV2-40A0A087WW87 121 aaPredicted RBP4.23□□□□□ -1.73
CCDC196-201ENST00000359454 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 LINC01549A6NIU2 74 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 KLLNB2CW77 178 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 K7EMI3 77 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 IGKV2D-40P01614 121 aaPredicted RBP4.23□□□□□ -1.73
CCDC196-201ENST00000359454 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
CCDC196-201ENST00000359454 CRIP1P50238 77 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 UBE2D1P51668 147 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 ERCC8Q13216 396 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 FAM104BQ5XKR9 115 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 LYZL1Q6UWQ5 148 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
CCDC196-201ENST00000359454 ORMDL3Q8N138 153 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 Q8N814 137 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 UBE2WQ96B02 151 aa4.23□□□□□ -1.73
CCDC196-201ENST00000359454 SRRM2Q9UQ35 2752 aaKnown RBP4.23□□□□□ -1.73
CCDC196-201ENST00000359454 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 IGHV1OR15-1A0A075B7D0 117 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 TMSB15BA0A087X1C1 80 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 H3BVH4 76 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 K7EQD1 137 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 RPL18AQ02543 176 aaKnown RBP4.22□□□□□ -1.73
CCDC196-201ENST00000359454 TWIST1Q15672 202 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 ZFP2Q6ZN57 461 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 SDIM1Q6ZPB5 146 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
CCDC196-201ENST00000359454 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 ARMS2P0C7Q2 107 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 CKS2P33552 79 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 FAT1Q14517 4588 aa4.21□□□□□ -1.74
CCDC196-201ENST00000359454 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV3-38A0A0C4DH36 116 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV1-58A0A0C4DH39 117 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 S100A4P26447 101 aaKnown RBP4.2□□□□□ -1.74
CCDC196-201ENST00000359454 LINC01556Q5JQF7 62 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 SPANXN1Q5VSR9 72 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 Q6ZSA8 131 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 ZFAND2AQ8N6M9 145 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 NRACQ8N912 160 aa4.2□□□□□ -1.74
CCDC196-201ENST00000359454 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 LINC01546A6NGU7 62 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 ATP5EP56381 51 aaPredicted RBP4.19□□□□□ -1.74
CCDC196-201ENST00000359454 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 ORMDL2Q53FV1 153 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 PRR9Q5T870 116 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 Q9HAA7 133 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 PHLDA3Q9Y5J5 127 aa4.19□□□□□ -1.74
CCDC196-201ENST00000359454 IGKV3D-20A0A0C4DH25 116 aa4.18□□□□□ -1.74
CCDC196-201ENST00000359454 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
CCDC196-201ENST00000359454 M0R381 172 aa4.18□□□□□ -1.74
CCDC196-201ENST00000359454 HBDP02042 147 aa4.18□□□□□ -1.74
CCDC196-201ENST00000359454 ZNF80P51504 273 aaPredicted RBP4.18□□□□□ -1.74
CCDC196-201ENST00000359454 MRPL51Q4U2R6 128 aaKnown RBP4.18□□□□□ -1.74
CCDC196-201ENST00000359454 Q8TAT8 98 aa4.18□□□□□ -1.74
CCDC196-201ENST00000359454 A0A096LNJ9 63 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 A0A0B4J2C4 111 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 LOC100131303A0A0U1RQF7 123 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 TEX49A0A1B0GTD5 131 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 D6R8Y8 96 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV3-30P01768 117 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV3-33P01772 117 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV3-30-3P0DP02 117 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 IGHV3-30-5P0DP03 117 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 LAGE3Q14657 143 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 SCXQ7RTU7 201 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 Q8N8P6 123 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
CCDC196-201ENST00000359454 TRAV8-3A0A0A6YYJ7 113 aa4.16□□□□□ -1.74
CCDC196-201ENST00000359454 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
CCDC196-201ENST00000359454 FCER1GP30273 86 aa4.16□□□□□ -1.74
CCDC196-201ENST00000359454 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
CCDC196-201ENST00000359454 LELP1Q5T871 98 aa4.16□□□□□ -1.74
CCDC196-201ENST00000359454 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CCDC196-201ENST00000359454 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.15□□□□□ -1.75
CCDC196-201ENST00000359454 IGHV3-16A0A0C4DH30 117 aa4.15□□□□□ -1.75
CCDC196-201ENST00000359454 SMKR1H3BMG3 65 aa4.15□□□□□ -1.75
CCDC196-201ENST00000359454 NDUFS5O43920 106 aa4.15□□□□□ -1.75
CCDC196-201ENST00000359454 LGALS3P17931 250 aaKnown RBP4.15□□□□□ -1.75
CCDC196-201ENST00000359454 IFI27P40305 119 aaPredicted RBP4.15□□□□□ -1.75
CCDC196-201ENST00000359454 RNF185Q96GF1 192 aa4.15□□□□□ -1.75
CCDC196-201ENST00000359454 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 LECT2O14960 151 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 BCE1O60756 84 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 CCKP06307 115 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 RHOHQ15669 191 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 PAPPA-AS1Q5QFB9 102 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 SLC25A29Q8N8R3 303 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 DAND5Q8N907 189 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms