RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 Q96NJ1 140 aa8.89□□□□□ -0.99
NLRC3-202ENST00000359128 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
NLRC3-202ENST00000359128 NAV3Q8IVL0 2385 aa8.88□□□□□ -0.99
NLRC3-202ENST00000359128 LINC00310P59036 64 aa8.88□□□□□ -0.99
NLRC3-202ENST00000359128 BCE1O60756 84 aa8.88□□□□□ -0.99
NLRC3-202ENST00000359128 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
NLRC3-202ENST00000359128 ACYP2P14621 99 aa8.87□□□□□ -0.99
NLRC3-202ENST00000359128 A0A096LNJ9 63 aa8.87□□□□□ -0.99
NLRC3-202ENST00000359128 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
NLRC3-202ENST00000359128 ELOF1P60002 83 aaKnown RBP8.86□□□□□ -0.99
NLRC3-202ENST00000359128 TLN1Q9Y490 2541 aaKnown RBP8.86□□□□□ -0.99
NLRC3-202ENST00000359128 PSPHP1O15172 72 aa8.86□□□□□ -0.99
NLRC3-202ENST00000359128 CHD8Q9HCK8 2581 aa8.85□□□□□ -0.99
NLRC3-202ENST00000359128 PTPRBP23467 1997 aa8.85□□□□□ -0.99
NLRC3-202ENST00000359128 Q6ZRX8 168 aa8.85□□□□□ -0.99
NLRC3-202ENST00000359128 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
NLRC3-202ENST00000359128 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
NLRC3-202ENST00000359128 A0A1B0GU69 56 aa8.84□□□□□ -0.99
NLRC3-202ENST00000359128 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
NLRC3-202ENST00000359128 GVQW2A0A096LPI5 108 aaPredicted RBP8.84□□□□□ -0.99
NLRC3-202ENST00000359128 Q9UF83 564 aa8.84□□□□□ -0.99
NLRC3-202ENST00000359128 PIEZO2Q9H5I5 2752 aa8.83□□□□□ -1
NLRC3-202ENST00000359128 PMAIP1Q13794 54 aa8.83□□□□□ -1
NLRC3-202ENST00000359128 C1orf195Q5TG92 126 aa8.83□□□□□ -1
NLRC3-202ENST00000359128 LINC01546A6NGU7 62 aa8.83□□□□□ -1
NLRC3-202ENST00000359128 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
NLRC3-202ENST00000359128 KRTAP10-11P60412 298 aa8.81□□□□□ -1
NLRC3-202ENST00000359128 ABCA2Q9BZC7 2435 aa8.81□□□□□ -1
NLRC3-202ENST00000359128 K7EIL1 84 aa8.8□□□□□ -1
NLRC3-202ENST00000359128 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
NLRC3-202ENST00000359128 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
NLRC3-202ENST00000359128 A0A1B0GW54 56 aa8.78□□□□□ -1
NLRC3-202ENST00000359128 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1.01
NLRC3-202ENST00000359128 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
NLRC3-202ENST00000359128 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
NLRC3-202ENST00000359128 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
NLRC3-202ENST00000359128 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
NLRC3-202ENST00000359128 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
NLRC3-202ENST00000359128 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
NLRC3-202ENST00000359128 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
NLRC3-202ENST00000359128 GOLGB1Q14789 3259 aaKnown RBP8.71□□□□□ -1.01
NLRC3-202ENST00000359128 SMR3BP02814 79 aaPredicted RBP8.71□□□□□ -1.02
NLRC3-202ENST00000359128 Q6ZQT0 140 aa8.71□□□□□ -1.02
NLRC3-202ENST00000359128 ANKRD11Q6UB99 2663 aaPredicted RBP8.7□□□□□ -1.02
NLRC3-202ENST00000359128 H3BPC8 53 aa8.7□□□□□ -1.02
NLRC3-202ENST00000359128 C19orf73Q9NVV2 129 aa8.7□□□□□ -1.02
NLRC3-202ENST00000359128 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
NLRC3-202ENST00000359128 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
NLRC3-202ENST00000359128 SPTBN4Q9H254 2564 aa8.69□□□□□ -1.02
NLRC3-202ENST00000359128 PCSK5Q92824 1860 aa8.69□□□□□ -1.02
NLRC3-202ENST00000359128 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
NLRC3-202ENST00000359128 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
NLRC3-202ENST00000359128 JMJD1CQ15652 2540 aa8.68□□□□□ -1.02
NLRC3-202ENST00000359128 SERTAD4-AS1Q5TG53 156 aa8.67□□□□□ -1.02
NLRC3-202ENST00000359128 A0A087WTM6 91 aa8.67□□□□□ -1.02
NLRC3-202ENST00000359128 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
NLRC3-202ENST00000359128 KRTAP10-3P60369 221 aa8.66□□□□□ -1.02
NLRC3-202ENST00000359128 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
NLRC3-202ENST00000359128 VPREB1P12018 145 aa8.66□□□□□ -1.02
NLRC3-202ENST00000359128 A8MWP4 228 aa8.65□□□□□ -1.02
NLRC3-202ENST00000359128 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
NLRC3-202ENST00000359128 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
NLRC3-202ENST00000359128 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
NLRC3-202ENST00000359128 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.03
NLRC3-202ENST00000359128 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.03
NLRC3-202ENST00000359128 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
NLRC3-202ENST00000359128 TM2D3Q9BRN9 247 aa8.64□□□□□ -1.03
NLRC3-202ENST00000359128 DSCR10P59022 87 aa8.64□□□□□ -1.03
NLRC3-202ENST00000359128 ZNF861PO60384 105 aa8.63□□□□□ -1.03
NLRC3-202ENST00000359128 ZNF462Q96JM2 2506 aa8.63□□□□□ -1.03
NLRC3-202ENST00000359128 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
NLRC3-202ENST00000359128 OBSCN-AS1Q96MR7 158 aa8.61□□□□□ -1.03
NLRC3-202ENST00000359128 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
NLRC3-202ENST00000359128 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
NLRC3-202ENST00000359128 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
NLRC3-202ENST00000359128 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
NLRC3-202ENST00000359128 TLN2Q9Y4G6 2542 aa8.58□□□□□ -1.04
NLRC3-202ENST00000359128 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
NLRC3-202ENST00000359128 USP9XQ93008 2570 aaPredicted RBP8.57□□□□□ -1.04
NLRC3-202ENST00000359128 ABCA12Q86UK0 2595 aa8.57□□□□□ -1.04
NLRC3-202ENST00000359128 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
NLRC3-202ENST00000359128 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
NLRC3-202ENST00000359128 LRRK2Q5S007 2527 aa8.56□□□□□ -1.04
NLRC3-202ENST00000359128 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
NLRC3-202ENST00000359128 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
NLRC3-202ENST00000359128 A0A096LNT2 108 aa8.56□□□□□ -1.04
NLRC3-202ENST00000359128 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
NLRC3-202ENST00000359128 WDR87Q6ZQQ6 2873 aa8.55□□□□□ -1.04
NLRC3-202ENST00000359128 K7EQZ3 153 aa8.55□□□□□ -1.04
NLRC3-202ENST00000359128 IGFL1Q6UW32 110 aa8.55□□□□□ -1.04
NLRC3-202ENST00000359128 USP9YO00507 2555 aaPredicted RBP8.53□□□□□ -1.04
NLRC3-202ENST00000359128 MUC4Q99102 2169 aa8.53□□□□□ -1.04
NLRC3-202ENST00000359128 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
NLRC3-202ENST00000359128 C8orf17Q9NRJ1 99 aa8.53□□□□□ -1.04
NLRC3-202ENST00000359128 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
NLRC3-202ENST00000359128 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
NLRC3-202ENST00000359128 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
NLRC3-202ENST00000359128 EPG5Q9HCE0 2579 aa8.51□□□□□ -1.05
NLRC3-202ENST00000359128 A0A1B0GVX0 72 aa8.51□□□□□ -1.05
NLRC3-202ENST00000359128 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms