RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 FBN2P35556 2912 aa7□□□□□ -1.29
RNF40-202ENST00000357890 NBEAL2Q6ZNJ1 2754 aa7□□□□□ -1.29
RNF40-202ENST00000357890 CELA1Q9UNI1 258 aa7□□□□□ -1.29
RNF40-202ENST00000357890 A0A087WZ39 114 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 Q6ZVQ6 151 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 C3orf84H3BNL1 204 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 GCN1Q92616 2671 aaKnown RBP6.99□□□□□ -1.29
RNF40-202ENST00000357890 LINC01006Q8NI28 216 aa6.99□□□□□ -1.29
RNF40-202ENST00000357890 MXRA5Q9NR99 2828 aa6.98□□□□□ -1.29
RNF40-202ENST00000357890 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
RNF40-202ENST00000357890 TM2D3Q9BRN9 247 aa6.98□□□□□ -1.29
RNF40-202ENST00000357890 BPY2O14599 106 aa6.97□□□□□ -1.29
RNF40-202ENST00000357890 PSPHP1O15172 72 aa6.97□□□□□ -1.29
RNF40-202ENST00000357890 MAST4O15021 2626 aa6.97□□□□□ -1.29
RNF40-202ENST00000357890 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.29
RNF40-202ENST00000357890 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.29
RNF40-202ENST00000357890 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
RNF40-202ENST00000357890 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
RNF40-202ENST00000357890 H7BZZ5 65 aa6.96□□□□□ -1.3
RNF40-202ENST00000357890 NDUFC1O43677 76 aa6.95□□□□□ -1.3
RNF40-202ENST00000357890 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
RNF40-202ENST00000357890 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
RNF40-202ENST00000357890 NIPBLQ6KC79 2804 aaeCLIP6.95□□□□□ -1.3
RNF40-202ENST00000357890 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
RNF40-202ENST00000357890 IGLV1-51P01701 117 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 PRO0255Q9UI72 69 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 IGHV3OR16-9A0A0B4J2B5 98 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 DEFB135Q30KP9 77 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 HIGD2BQ4VC39 106 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
RNF40-202ENST00000357890 MGAM2Q2M2H8 2515 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
RNF40-202ENST00000357890 IL17DQ8TAD2 202 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 PRYO14603 147 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 PDE6GP18545 87 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 COX7BP24311 80 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 RETNQ9HD89 108 aa6.92□□□□□ -1.3
RNF40-202ENST00000357890 HELZ2Q9BYK8 2649 aaKnown RBP6.91□□□□□ -1.3
RNF40-202ENST00000357890 M0R2N4 97 aa6.91□□□□□ -1.3
RNF40-202ENST00000357890 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
RNF40-202ENST00000357890 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
RNF40-202ENST00000357890 C16orf95Q9H693 158 aa6.91□□□□□ -1.3
RNF40-202ENST00000357890 ESRGQ1W209 222 aa6.9□□□□□ -1.3
RNF40-202ENST00000357890 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
RNF40-202ENST00000357890 REG3AQ06141 175 aa6.9□□□□□ -1.3
RNF40-202ENST00000357890 KLK12Q9UKR0 248 aa6.9□□□□□ -1.3
RNF40-202ENST00000357890 CR1P17927 2039 aa6.9□□□□□ -1.31
RNF40-202ENST00000357890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.9□□□□□ -1.31
RNF40-202ENST00000357890 TRBV10-3A0A0K0K1G6 114 aa6.89□□□□□ -1.31
RNF40-202ENST00000357890 LINC00575Q6W349 94 aa6.89□□□□□ -1.31
RNF40-202ENST00000357890 MUC7Q8TAX7 377 aa6.89□□□□□ -1.31
RNF40-202ENST00000357890 Q6ZQT0 140 aa6.89□□□□□ -1.31
RNF40-202ENST00000357890 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
RNF40-202ENST00000357890 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
RNF40-202ENST00000357890 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
RNF40-202ENST00000357890 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
RNF40-202ENST00000357890 Q8IZM0 81 aa6.88□□□□□ -1.31
RNF40-202ENST00000357890 TEP1Q99973 2627 aaKnown RBP6.88□□□□□ -1.31
RNF40-202ENST00000357890 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
RNF40-202ENST00000357890 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
RNF40-202ENST00000357890 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
RNF40-202ENST00000357890 FP248Q71RG6 208 aaPredicted RBP6.87□□□□□ -1.31
RNF40-202ENST00000357890 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
RNF40-202ENST00000357890 CD164L2Q6UWJ8 174 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 LYPD5Q6UWN5 251 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 APOC4P55056 127 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 PLAC8L1A1L4L8 177 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 LY6G6DO95868 133 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
RNF40-202ENST00000357890 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
RNF40-202ENST00000357890 SETXQ7Z333 2677 aaKnown RBP6.85□□□□□ -1.31
RNF40-202ENST00000357890 F8WDY8 70 aa6.85□□□□□ -1.31
RNF40-202ENST00000357890 UBR5O95071 2799 aaPredicted RBP6.84□□□□□ -1.31
RNF40-202ENST00000357890 CSNK1G2-AS1Q8NCQ2 148 aa6.84□□□□□ -1.31
RNF40-202ENST00000357890 NBPF19A0A087WUL8 3843 aa6.84□□□□□ -1.31
RNF40-202ENST00000357890 ZNF73O43830 326 aaPredicted RBP6.84□□□□□ -1.31
RNF40-202ENST00000357890 C19orf73Q9NVV2 129 aa6.84□□□□□ -1.31
RNF40-202ENST00000357890 CYSRT1A8MQ03 144 aa6.84□□□□□ -1.31
RNF40-202ENST00000357890 LYRM9A8MSI8 78 aa6.84□□□□□ -1.31
RNF40-202ENST00000357890 CXCL6P80162 114 aa6.83□□□□□ -1.32
RNF40-202ENST00000357890 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
RNF40-202ENST00000357890 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
RNF40-202ENST00000357890 SMR3AQ99954 134 aa6.83□□□□□ -1.32
RNF40-202ENST00000357890 SPART-AS1P0CW21 52 aa6.82□□□□□ -1.32
RNF40-202ENST00000357890 A0A1B0GUV1 79 aa6.82□□□□□ -1.32
RNF40-202ENST00000357890 WFDC13Q8IUB5 93 aa6.82□□□□□ -1.32
RNF40-202ENST00000357890 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 C10orf25Q5T742 122 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 APCP25054 2843 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 MP68P56378 58 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 WFDC10BQ8IUB3 73 aa6.81□□□□□ -1.32
RNF40-202ENST00000357890 NBEAL1Q6ZS30 2694 aa6.8□□□□□ -1.32
RNF40-202ENST00000357890 A0A0J9YWU9 116 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms