RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
USP6-202ENST00000357482 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
USP6-202ENST00000357482 PRYO14603 147 aa10.31□□□□□ -0.76
USP6-202ENST00000357482 Q6ZTC4 211 aa10.31□□□□□ -0.76
USP6-202ENST00000357482 NDUFS5O43920 106 aa10.3□□□□□ -0.76
USP6-202ENST00000357482 IGLV1-40P01703 118 aa10.3□□□□□ -0.76
USP6-202ENST00000357482 NREPQ16612 68 aa10.3□□□□□ -0.76
USP6-202ENST00000357482 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
USP6-202ENST00000357482 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
USP6-202ENST00000357482 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
USP6-202ENST00000357482 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
USP6-202ENST00000357482 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
USP6-202ENST00000357482 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 UBE2BP63146 152 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 C11orf72Q8NBR9 251 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 C4orf3Q8WVX3 66 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 USMG5Q96IX5 58 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 Q9UF83 564 aa10.28□□□□□ -0.76
USP6-202ENST00000357482 hDV103S1A0JD37 113 aa10.27□□□□□ -0.76
USP6-202ENST00000357482 H3BQ85 93 aa10.27□□□□□ -0.77
USP6-202ENST00000357482 K7EIL1 84 aa10.27□□□□□ -0.77
USP6-202ENST00000357482 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
USP6-202ENST00000357482 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
USP6-202ENST00000357482 Q8N3U1 123 aa10.26□□□□□ -0.77
USP6-202ENST00000357482 PRKDCP78527 4128 aaKnown RBP10.26□□□□□ -0.77
USP6-202ENST00000357482 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
USP6-202ENST00000357482 IGHV3OR16-13A0A075B7E8 117 aa10.25□□□□□ -0.77
USP6-202ENST00000357482 IGHV3-74A0A0B4J1X5 117 aa10.25□□□□□ -0.77
USP6-202ENST00000357482 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
USP6-202ENST00000357482 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
USP6-202ENST00000357482 DGAT2L7PQ6IED9 249 aa10.24□□□□□ -0.77
USP6-202ENST00000357482 Q6ZQT0 140 aa10.24□□□□□ -0.77
USP6-202ENST00000357482 Q6ZVQ6 151 aa10.24□□□□□ -0.77
USP6-202ENST00000357482 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
USP6-202ENST00000357482 HAMPP81172 84 aa10.23□□□□□ -0.77
USP6-202ENST00000357482 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
USP6-202ENST00000357482 Q8N814 137 aa10.23□□□□□ -0.77
USP6-202ENST00000357482 SLPIP03973 132 aa10.23□□□□□ -0.77
USP6-202ENST00000357482 MUC4Q99102 2169 aa10.22□□□□□ -0.77
USP6-202ENST00000357482 LINC00588Q9Y4M8 146 aa10.22□□□□□ -0.77
USP6-202ENST00000357482 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.77
USP6-202ENST00000357482 A0A087WZ39 114 aa10.21□□□□□ -0.77
USP6-202ENST00000357482 IGHV3-49A0A0A0MS15 119 aa10.21□□□□□ -0.77
USP6-202ENST00000357482 NDUFA4O00483 81 aa10.21□□□□□ -0.77
USP6-202ENST00000357482 COX6A2Q02221 97 aa10.21□□□□□ -0.77
USP6-202ENST00000357482 BPY2O14599 106 aa10.21□□□□□ -0.78
USP6-202ENST00000357482 Q6ZRP5 223 aa10.21□□□□□ -0.78
USP6-202ENST00000357482 SLURP1P55000 103 aa10.19□□□□□ -0.78
USP6-202ENST00000357482 LINC00467Q9BRT7 94 aa10.19□□□□□ -0.78
USP6-202ENST00000357482 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
USP6-202ENST00000357482 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
USP6-202ENST00000357482 M0R378 163 aa10.18□□□□□ -0.78
USP6-202ENST00000357482 PHF5AQ7RTV0 110 aaKnown RBP10.18□□□□□ -0.78
USP6-202ENST00000357482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.17□□□□□ -0.78
USP6-202ENST00000357482 UBE2L6O14933 153 aa10.17□□□□□ -0.78
USP6-202ENST00000357482 CCL18P55774 89 aa10.17□□□□□ -0.78
USP6-202ENST00000357482 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
USP6-202ENST00000357482 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
USP6-202ENST00000357482 Q6ZTI0 123 aa10.16□□□□□ -0.78
USP6-202ENST00000357482 UBE2AP49459 152 aa10.15□□□□□ -0.78
USP6-202ENST00000357482 APOC4P55056 127 aa10.15□□□□□ -0.78
USP6-202ENST00000357482 TRAV22A0A0B4J277 110 aa10.15□□□□□ -0.79
USP6-202ENST00000357482 K7EQG2 157 aa10.14□□□□□ -0.79
USP6-202ENST00000357482 LINC00158P58513 81 aa10.14□□□□□ -0.79
USP6-202ENST00000357482 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
USP6-202ENST00000357482 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
USP6-202ENST00000357482 K7EQD1 137 aa10.13□□□□□ -0.79
USP6-202ENST00000357482 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
USP6-202ENST00000357482 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
USP6-202ENST00000357482 K7EMT4 169 aa10.13□□□□□ -0.79
USP6-202ENST00000357482 SYCNQ0VAF6 134 aa10.12□□□□□ -0.79
USP6-202ENST00000357482 RHPN1-AS1Q9BWJ2 59 aa10.12□□□□□ -0.79
USP6-202ENST00000357482 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
USP6-202ENST00000357482 DEFB1P60022 68 aa10.1□□□□□ -0.79
USP6-202ENST00000357482 C1orf64Q8NEQ6 169 aa10.09□□□□□ -0.79
USP6-202ENST00000357482 DNAH3Q8TD57 4116 aa10.09□□□□□ -0.79
USP6-202ENST00000357482 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
USP6-202ENST00000357482 PSPHP1O15172 72 aa10.07□□□□□ -0.8
USP6-202ENST00000357482 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
USP6-202ENST00000357482 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
USP6-202ENST00000357482 ZNF73O43830 326 aaPredicted RBP10.07□□□□□ -0.8
USP6-202ENST00000357482 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
USP6-202ENST00000357482 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
USP6-202ENST00000357482 IGKV3-7A0A075B6H7 116 aa10.06□□□□□ -0.8
USP6-202ENST00000357482 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
USP6-202ENST00000357482 LCE6AA0A183 80 aa10.06□□□□□ -0.8
USP6-202ENST00000357482 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
USP6-202ENST00000357482 LIMD2Q9BT23 127 aa10.05□□□□□ -0.8
USP6-202ENST00000357482 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
USP6-202ENST00000357482 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
USP6-202ENST00000357482 SORL1Q92673 2214 aa10.04□□□□□ -0.8
USP6-202ENST00000357482 PSCAO43653 123 aa10.03□□□□□ -0.8
USP6-202ENST00000357482 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
USP6-202ENST00000357482 LINC00575Q6W349 94 aa10.03□□□□□ -0.8
USP6-202ENST00000357482 HIGD2AQ9BW72 106 aa10.03□□□□□ -0.8
USP6-202ENST00000357482 LCA10Q71F78 164 aa10.03□□□□□ -0.8
USP6-202ENST00000357482 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
USP6-202ENST00000357482 C7orf65Q6ZTY9 151 aa10.01□□□□□ -0.81
USP6-202ENST00000357482 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
USP6-202ENST00000357482 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms