RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 XAGE1AQ9HD64 81 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 DEFB131BA0A096LNP1 70 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-202ENST00000357162 ACYP2P14621 99 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 NBEAQ8NFP9 2946 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 Q8NBF4 154 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 H0Y9P7 68 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 MOBPQ13875 183 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-202ENST00000357162 A0A087WYN8 130 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 SPATA3Q8NHX4 192 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 FAM19A4Q96LR4 140 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 LY6G6DO95868 133 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 CFAP54Q96N23 3096 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 TRBV7-4A0A0J9YYF1 115 aa4.68□□□□□ -1.66
VPS13B-202ENST00000357162 Q6ZQT0 140 aa4.67□□□□□ -1.66
VPS13B-202ENST00000357162 SERTAD4-AS1Q5TG53 156 aa4.67□□□□□ -1.66
VPS13B-202ENST00000357162 ASH1LQ9NR48 2969 aaKnown RBP4.67□□□□□ -1.66
VPS13B-202ENST00000357162 IGLV1-51P01701 117 aa4.67□□□□□ -1.66
VPS13B-202ENST00000357162 LINC00482Q8N8I6 264 aa4.67□□□□□ -1.66
VPS13B-202ENST00000357162 SMCPP49901 116 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-202ENST00000357162 GRNP28799 593 aaKnown RBP4.67□□□□□ -1.66
VPS13B-202ENST00000357162 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
VPS13B-202ENST00000357162 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
VPS13B-202ENST00000357162 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
VPS13B-202ENST00000357162 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
VPS13B-202ENST00000357162 ZNF702PQ9H963 129 aa4.65□□□□□ -1.66
VPS13B-202ENST00000357162 MGAQ8IWI9 3026 aa4.65□□□□□ -1.66
VPS13B-202ENST00000357162 TRAV22A0A0B4J277 110 aa4.65□□□□□ -1.66
VPS13B-202ENST00000357162 DEFB1P60022 68 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 C22orf34Q6ZV56 151 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 A0A087WVE0 104 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 SOSTDC1Q6X4U4 206 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 A0A0J9YWU9 116 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 IGHV4-30-4P0DP06 118 aa4.65□□□□□ -1.67
VPS13B-202ENST00000357162 PSPHP1O15172 72 aa4.64□□□□□ -1.67
VPS13B-202ENST00000357162 CRYBG3Q68DQ2 2970 aa4.64□□□□□ -1.67
VPS13B-202ENST00000357162 A0A1W2PNU3 283 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-202ENST00000357162 ODF3L2Q3SX64 289 aa4.64□□□□□ -1.67
VPS13B-202ENST00000357162 LOC100131303A0A0U1RQF7 123 aa4.64□□□□□ -1.67
VPS13B-202ENST00000357162 GAS8-AS1O95177 125 aa4.64□□□□□ -1.67
VPS13B-202ENST00000357162 NUPR2A6NF83 97 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 Q6ZRX8 168 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 UNQ6190/PRO20217Q6UXQ8 127 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 RETNLBQ9BQ08 111 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 IGHV4-31P0DP07 118 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 FHL2Q14192 279 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 Q6ZTC4 211 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 LINC00315P59091 139 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 Q9BRP9 147 aa4.63□□□□□ -1.67
VPS13B-202ENST00000357162 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-202ENST00000357162 TACC2O95359 2948 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 ZZEF1O43149 2961 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 SPAG11AQ6PDA7 123 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 C16orf95Q9H693 158 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 ZNF843Q8N446 348 aa4.62□□□□□ -1.67
VPS13B-202ENST00000357162 PRB1P04280 392 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 LINC01556Q5JQF7 62 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 OBSCN-AS1Q96MR7 158 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 EP400Q96L91 3159 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 A0A1B0GU69 56 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 IGKV2-24A0A0C4DH68 120 aa4.61□□□□□ -1.67
VPS13B-202ENST00000357162 LITAFQ99732 161 aa4.6□□□□□ -1.67
VPS13B-202ENST00000357162 FAM229AH3BQW9 127 aa4.6□□□□□ -1.67
VPS13B-202ENST00000357162 FHL3Q13643 280 aa4.6□□□□□ -1.67
VPS13B-202ENST00000357162 FRYQ5TBA9 3013 aa4.6□□□□□ -1.67
VPS13B-202ENST00000357162 SRRM2Q9UQ35 2752 aaKnown RBP4.6□□□□□ -1.67
VPS13B-202ENST00000357162 PROK1P58294 105 aa4.59□□□□□ -1.67
VPS13B-202ENST00000357162 COX6A2Q02221 97 aa4.59□□□□□ -1.67
VPS13B-202ENST00000357162 DCHS2Q6V1P9 2916 aa4.59□□□□□ -1.68
VPS13B-202ENST00000357162 A0A087WSZ3 146 aa4.59□□□□□ -1.68
VPS13B-202ENST00000357162 C6orf48Q9UBA6 75 aa4.59□□□□□ -1.68
VPS13B-202ENST00000357162 TENM4Q6N022 2769 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 PRR4Q16378 134 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 A8MWP4 228 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 UQCR11O14957 56 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 PRB2P02812 416 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-202ENST00000357162 H7BZZ5 65 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 A8MTW9 85 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 Q1T7F1 81 aa4.58□□□□□ -1.68
VPS13B-202ENST00000357162 LINC01006Q8NI28 216 aa4.57□□□□□ -1.68
VPS13B-202ENST00000357162 MAPK1IP1LQ8NDC0 245 aa4.57□□□□□ -1.68
VPS13B-202ENST00000357162 EDN2P20800 178 aa4.57□□□□□ -1.68
VPS13B-202ENST00000357162 IGLV4-60A0A075B6I1 120 aa4.57□□□□□ -1.68
VPS13B-202ENST00000357162 Q6ZRP5 223 aa4.57□□□□□ -1.68
VPS13B-202ENST00000357162 TRIOO75962 3097 aa4.56□□□□□ -1.68
VPS13B-202ENST00000357162 IGHV6-1A0A0B4J1U7 121 aa4.56□□□□□ -1.68
VPS13B-202ENST00000357162 TM2D3Q9BRN9 247 aa4.56□□□□□ -1.68
VPS13B-202ENST00000357162 TNRC18O15417 2968 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-202ENST00000357162 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-202ENST00000357162 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms