RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 Q6ZRX8 168 aa8.74□□□□□ -1.01
SYNCRIP-201ENST00000355238 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
SYNCRIP-201ENST00000355238 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
SYNCRIP-201ENST00000355238 NAV2Q8IVL1 2488 aa8.71□□□□□ -1.01
SYNCRIP-201ENST00000355238 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.01
SYNCRIP-201ENST00000355238 NOTCH2Q04721 2471 aa8.71□□□□□ -1.01
SYNCRIP-201ENST00000355238 HIVEP3Q5T1R4 2406 aa8.71□□□□□ -1.02
SYNCRIP-201ENST00000355238 CUL9Q8IWT3 2517 aa8.71□□□□□ -1.02
SYNCRIP-201ENST00000355238 IGLV5-52A0A0A0MRZ9 124 aa8.71□□□□□ -1.02
SYNCRIP-201ENST00000355238 A0A1W2PPR1 153 aa8.71□□□□□ -1.02
SYNCRIP-201ENST00000355238 TTC28Q96AY4 2481 aa8.7□□□□□ -1.02
SYNCRIP-201ENST00000355238 H7BZZ5 65 aa8.7□□□□□ -1.02
SYNCRIP-201ENST00000355238 COA5Q86WW8 74 aa8.7□□□□□ -1.02
SYNCRIP-201ENST00000355238 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
SYNCRIP-201ENST00000355238 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
SYNCRIP-201ENST00000355238 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
SYNCRIP-201ENST00000355238 MOBPQ13875 183 aa8.68□□□□□ -1.02
SYNCRIP-201ENST00000355238 LY6G6CO95867 125 aa8.67□□□□□ -1.02
SYNCRIP-201ENST00000355238 MYO18BQ8IUG5 2567 aa8.67□□□□□ -1.02
SYNCRIP-201ENST00000355238 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
SYNCRIP-201ENST00000355238 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
SYNCRIP-201ENST00000355238 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
SYNCRIP-201ENST00000355238 PTPRBP23467 1997 aa8.66□□□□□ -1.02
SYNCRIP-201ENST00000355238 PRO3102Q9H379 93 aa8.65□□□□□ -1.02
SYNCRIP-201ENST00000355238 A8MWP4 228 aa8.65□□□□□ -1.03
SYNCRIP-201ENST00000355238 H3BNG1 76 aa8.65□□□□□ -1.03
SYNCRIP-201ENST00000355238 WIPF1O43516 503 aa8.65□□□□□ -1.03
SYNCRIP-201ENST00000355238 K7EQZ3 153 aa8.64□□□□□ -1.03
SYNCRIP-201ENST00000355238 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
SYNCRIP-201ENST00000355238 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
SYNCRIP-201ENST00000355238 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
SYNCRIP-201ENST00000355238 UQCR11O14957 56 aa8.63□□□□□ -1.03
SYNCRIP-201ENST00000355238 SRCAPQ6ZRS2 3230 aa8.62□□□□□ -1.03
SYNCRIP-201ENST00000355238 LCA10Q71F78 164 aa8.61□□□□□ -1.03
SYNCRIP-201ENST00000355238 GOLGB1Q14789 3259 aaKnown RBP8.59□□□□□ -1.03
SYNCRIP-201ENST00000355238 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
SYNCRIP-201ENST00000355238 LINC00313P59037 77 aa8.59□□□□□ -1.03
SYNCRIP-201ENST00000355238 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
SYNCRIP-201ENST00000355238 KRTAP10-9P60411 292 aa8.58□□□□□ -1.04
SYNCRIP-201ENST00000355238 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 CCDC168Q8NDH2 2452 aa8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 IGLV8-61A0A075B6I0 122 aa8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 MRPL34Q9BQ48 92 aaKnown RBP8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
SYNCRIP-201ENST00000355238 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
SYNCRIP-201ENST00000355238 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
SYNCRIP-201ENST00000355238 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
SYNCRIP-201ENST00000355238 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
SYNCRIP-201ENST00000355238 ABCA2Q9BZC7 2435 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 Q6ZRP5 223 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 SMR3AQ99954 134 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 MUC4Q99102 2169 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 SPACA4Q8TDM5 124 aa8.54□□□□□ -1.04
SYNCRIP-201ENST00000355238 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
SYNCRIP-201ENST00000355238 MDFIQ99750 246 aa8.52□□□□□ -1.05
SYNCRIP-201ENST00000355238 PIEZO2Q9H5I5 2752 aa8.52□□□□□ -1.05
SYNCRIP-201ENST00000355238 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
SYNCRIP-201ENST00000355238 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
SYNCRIP-201ENST00000355238 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
SYNCRIP-201ENST00000355238 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
SYNCRIP-201ENST00000355238 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
SYNCRIP-201ENST00000355238 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
SYNCRIP-201ENST00000355238 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
SYNCRIP-201ENST00000355238 COL27A1Q8IZC6 1860 aaPredicted RBP8.47□□□□□ -1.05
SYNCRIP-201ENST00000355238 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
SYNCRIP-201ENST00000355238 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
SYNCRIP-201ENST00000355238 Q1T7F1 81 aa8.46□□□□□ -1.05
SYNCRIP-201ENST00000355238 Q8N377 158 aa8.46□□□□□ -1.05
SYNCRIP-201ENST00000355238 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.05
SYNCRIP-201ENST00000355238 Q8NAQ8 132 aa8.46□□□□□ -1.06
SYNCRIP-201ENST00000355238 TLN1Q9Y490 2541 aaKnown RBP8.44□□□□□ -1.06
SYNCRIP-201ENST00000355238 FAM168BA1KXE4 195 aa8.42□□□□□ -1.06
SYNCRIP-201ENST00000355238 DNAH10OSP0CZ25 163 aa8.42□□□□□ -1.06
SYNCRIP-201ENST00000355238 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
SYNCRIP-201ENST00000355238 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
SYNCRIP-201ENST00000355238 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
SYNCRIP-201ENST00000355238 ZNF462Q96JM2 2506 aa8.41□□□□□ -1.06
SYNCRIP-201ENST00000355238 UTRNP46939 3433 aa8.4□□□□□ -1.06
SYNCRIP-201ENST00000355238 IGF2RP11717 2491 aa8.4□□□□□ -1.06
SYNCRIP-201ENST00000355238 Q96NJ1 140 aa8.4□□□□□ -1.07
SYNCRIP-201ENST00000355238 LINC00588Q9Y4M8 146 aa8.39□□□□□ -1.07
SYNCRIP-201ENST00000355238 CHTF8P0CG12 524 aa8.39□□□□□ -1.07
SYNCRIP-201ENST00000355238 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
SYNCRIP-201ENST00000355238 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
SYNCRIP-201ENST00000355238 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
SYNCRIP-201ENST00000355238 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
SYNCRIP-201ENST00000355238 RTL8CO15255 209 aa8.36□□□□□ -1.07
SYNCRIP-201ENST00000355238 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
SYNCRIP-201ENST00000355238 Q5XG85 94 aa8.36□□□□□ -1.07
SYNCRIP-201ENST00000355238 A0A1W2PNM2 257 aa8.35□□□□□ -1.07
SYNCRIP-201ENST00000355238 ABCA12Q86UK0 2595 aa8.35□□□□□ -1.07
SYNCRIP-201ENST00000355238 TLX1NBP0CAT3 122 aa8.34□□□□□ -1.07
SYNCRIP-201ENST00000355238 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
SYNCRIP-201ENST00000355238 NBDYA0A0U1RRE5 68 aa8.34□□□□□ -1.07
SYNCRIP-201ENST00000355238 COL4A2P08572 1712 aa8.32□□□□□ -1.08
SYNCRIP-201ENST00000355238 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
SYNCRIP-201ENST00000355238 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
SYNCRIP-201ENST00000355238 DSCR10P59022 87 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms