RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
CTSB-202ENST00000353047 PDZD2O15018 2839 aa12.47□□□□□ -0.41
CTSB-202ENST00000353047 Q6JHZ5 121 aa12.47□□□□□ -0.41
CTSB-202ENST00000353047 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
CTSB-202ENST00000353047 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
CTSB-202ENST00000353047 Q8IZM0 81 aa12.46□□□□□ -0.41
CTSB-202ENST00000353047 PLAC8L1A1L4L8 177 aa12.46□□□□□ -0.42
CTSB-202ENST00000353047 DIRC1Q969H9 104 aa12.44□□□□□ -0.42
CTSB-202ENST00000353047 CELA1Q9UNI1 258 aa12.43□□□□□ -0.42
CTSB-202ENST00000353047 RETNQ9HD89 108 aa12.42□□□□□ -0.42
CTSB-202ENST00000353047 M0R2N4 97 aa12.42□□□□□ -0.42
CTSB-202ENST00000353047 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
CTSB-202ENST00000353047 C22orf24Q9Y442 160 aa12.42□□□□□ -0.42
CTSB-202ENST00000353047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.4□□□□□ -0.42
CTSB-202ENST00000353047 C4orf26Q17RF5 130 aa12.4□□□□□ -0.42
CTSB-202ENST00000353047 SPATA3Q8NHX4 192 aa12.4□□□□□ -0.42
CTSB-202ENST00000353047 FSHBP01225 129 aa12.4□□□□□ -0.42
CTSB-202ENST00000353047 NBPF19A0A087WUL8 3843 aa12.4□□□□□ -0.42
CTSB-202ENST00000353047 INAFM1C9JVW0 142 aa12.39□□□□□ -0.43
CTSB-202ENST00000353047 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
CTSB-202ENST00000353047 APOC4P55056 127 aa12.39□□□□□ -0.43
CTSB-202ENST00000353047 RMI2Q96E14 147 aa12.39□□□□□ -0.43
CTSB-202ENST00000353047 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
CTSB-202ENST00000353047 COX7BP24311 80 aa12.38□□□□□ -0.43
CTSB-202ENST00000353047 MPLKIPQ8TAP9 179 aa12.38□□□□□ -0.43
CTSB-202ENST00000353047 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
CTSB-202ENST00000353047 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
CTSB-202ENST00000353047 NREPQ16612 68 aa12.36□□□□□ -0.43
CTSB-202ENST00000353047 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
CTSB-202ENST00000353047 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
CTSB-202ENST00000353047 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
CTSB-202ENST00000353047 CSNK1G2-AS1Q8NCQ2 148 aa12.35□□□□□ -0.43
CTSB-202ENST00000353047 C1orf43Q9BWL3 253 aa12.35□□□□□ -0.43
CTSB-202ENST00000353047 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
CTSB-202ENST00000353047 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 TMEM258P61165 79 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 PRR4Q16378 134 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 F8WEM9 126 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 LINC00575Q6W349 94 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 Q6ZVQ6 151 aa12.34□□□□□ -0.43
CTSB-202ENST00000353047 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 ZNF73O43830 326 aaPredicted RBP12.33□□□□□ -0.44
CTSB-202ENST00000353047 IL17DQ8TAD2 202 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 X6R8D5 127 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 CRYGAP11844 174 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 C19orf73Q9NVV2 129 aa12.33□□□□□ -0.44
CTSB-202ENST00000353047 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
CTSB-202ENST00000353047 Q8NDZ9 215 aa12.32□□□□□ -0.44
CTSB-202ENST00000353047 C9orf66Q5T8R8 295 aa12.31□□□□□ -0.44
CTSB-202ENST00000353047 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
CTSB-202ENST00000353047 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
CTSB-202ENST00000353047 A0A1B0GUV1 79 aa12.29□□□□□ -0.44
CTSB-202ENST00000353047 A0A0U1RQV1 116 aa12.28□□□□□ -0.44
CTSB-202ENST00000353047 LYRM9A8MSI8 78 aa12.28□□□□□ -0.44
CTSB-202ENST00000353047 NANOS2P60321 138 aaKnown RBP12.28□□□□□ -0.44
CTSB-202ENST00000353047 C5orf47Q569G3 176 aa12.28□□□□□ -0.44
CTSB-202ENST00000353047 UBE2BP63146 152 aa12.27□□□□□ -0.44
CTSB-202ENST00000353047 PKIGQ9Y2B9 76 aa12.27□□□□□ -0.44
CTSB-202ENST00000353047 KIAA0087Q14695 138 aa12.26□□□□□ -0.45
CTSB-202ENST00000353047 A0A096LNI7 61 aa12.26□□□□□ -0.45
CTSB-202ENST00000353047 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
CTSB-202ENST00000353047 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
CTSB-202ENST00000353047 LY6G6DO95868 133 aa12.25□□□□□ -0.45
CTSB-202ENST00000353047 MUC7Q8TAX7 377 aa12.25□□□□□ -0.45
CTSB-202ENST00000353047 C6orf48Q9UBA6 75 aa12.25□□□□□ -0.45
CTSB-202ENST00000353047 BPY2O14599 106 aa12.24□□□□□ -0.45
CTSB-202ENST00000353047 FAM19A3Q7Z5A8 133 aa12.24□□□□□ -0.45
CTSB-202ENST00000353047 Q6ZRU5 148 aa12.24□□□□□ -0.45
CTSB-202ENST00000353047 LINC01600Q96MT4 127 aa12.24□□□□□ -0.45
CTSB-202ENST00000353047 BRK1Q8WUW1 75 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 LELP1Q5T871 98 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 PKD1L1Q8TDX9 2849 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 COX17Q14061 63 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 DEFB116Q30KQ4 102 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 Q6ZTC4 211 aa12.23□□□□□ -0.45
CTSB-202ENST00000353047 ATP5EP2Q5VTU8 51 aa12.22□□□□□ -0.45
CTSB-202ENST00000353047 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.45
CTSB-202ENST00000353047 Q6ZQT0 140 aa12.21□□□□□ -0.45
CTSB-202ENST00000353047 FBN1P35555 2871 aaKnown RBP12.21□□□□□ -0.45
CTSB-202ENST00000353047 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.45
CTSB-202ENST00000353047 KRTAP10-3P60369 221 aa12.21□□□□□ -0.46
CTSB-202ENST00000353047 J3QKU1 62 aa12.2□□□□□ -0.46
CTSB-202ENST00000353047 NDUFC2O95298 119 aa12.19□□□□□ -0.46
CTSB-202ENST00000353047 KRTAP1-3Q8IUG1 177 aa12.19□□□□□ -0.46
CTSB-202ENST00000353047 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
CTSB-202ENST00000353047 TRAV7A0A075B6U4 112 aa12.16□□□□□ -0.46
CTSB-202ENST00000353047 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTSB-202ENST00000353047 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
CTSB-202ENST00000353047 MIFP14174 115 aa12.14□□□□□ -0.47
CTSB-202ENST00000353047 SYCNQ0VAF6 134 aa12.14□□□□□ -0.47
CTSB-202ENST00000353047 A0A0G2JQZ4 141 aa12.14□□□□□ -0.47
CTSB-202ENST00000353047 A0A1W2PNN7 141 aa12.14□□□□□ -0.47
CTSB-202ENST00000353047 HIGD2AQ9BW72 106 aa12.14□□□□□ -0.47
CTSB-202ENST00000353047 DEFB131BA0A096LNP1 70 aa12.13□□□□□ -0.47
CTSB-202ENST00000353047 OXTP01178 125 aa12.12□□□□□ -0.47
CTSB-202ENST00000353047 LINC00474Q9P2X8 69 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms