RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 OCIAD2Q56VL3 154 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 C5orf38Q86SI9 138 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 ARL17AQ8IVW1 177 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
CD44-205ENST00000352818 K7ERU9 68 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 M0QXV9 152 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 FOXI1Q12951 378 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 KIAA0087Q14695 138 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 DAND5Q8N907 189 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 TOMM7Q9P0U1 55 aa5.51□□□□□ -1.53
CD44-205ENST00000352818 DEFB131BA0A096LNP1 70 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 TCL1BO95988 128 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
CD44-205ENST00000352818 Q1RN00 199 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 LINC01600Q96MT4 127 aa5.5□□□□□ -1.53
CD44-205ENST00000352818 TRAV10A0A0B4J240 114 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 TRIAP1O43715 76 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 SMR3BP02814 79 aaPredicted RBP5.49□□□□□ -1.53
CD44-205ENST00000352818 COX6CP09669 75 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 PSMB2P49721 201 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 NPC2P61916 151 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 COX17Q14061 63 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 C6orf226Q5I0X4 101 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 Q8N3U1 123 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
CD44-205ENST00000352818 TRAV13-2A0A0B4J235 113 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 SCGB1C2P0DMR2 95 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 WFDC2Q14508 124 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 ATXN8Q156A1 80 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 C4orf48Q5BLP8 95 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 CFAP161Q6P656 301 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 C15orf53Q8NAA6 179 aa5.48□□□□□ -1.53
CD44-205ENST00000352818 DNAH8Q96JB1 4490 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 CRPP02741 224 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 MALP21145 153 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 LINC00158P58513 81 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 CKS1BP61024 79 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
CD44-205ENST00000352818 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.54
CD44-205ENST00000352818 H7C2G1 150 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 LST1O00453 97 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 SMCPP49901 116 aaPredicted RBP5.46□□□□□ -1.54
CD44-205ENST00000352818 CCL18P55774 89 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 ESRGQ1W209 222 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 LINC01620Q4KN68 170 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 WFDC10BQ8IUB3 73 aa5.46□□□□□ -1.54
CD44-205ENST00000352818 IGKV2-28A0A075B6P5 120 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 J3QR89 54 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 IGKV2D-28P01615 120 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 FUSP35637 526 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-205ENST00000352818 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 KRTAP26-1Q6PEX3 210 aa5.45□□□□□ -1.54
CD44-205ENST00000352818 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 F8WDY8 70 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 H3BT86 120 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 SLC25A20O43772 301 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 NDUFC2O95298 119 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 PFN2P35080 140 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 RPL28P46779 137 aaKnown RBP5.44□□□□□ -1.54
CD44-205ENST00000352818 C21orf62-AS1Q17RA5 79 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 ETDBQ3ZM63 59 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 C2orf82Q6UX34 121 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 TEN1Q86WV5 123 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 UBE2WQ96B02 151 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 CARD19Q96LW7 228 aa5.44□□□□□ -1.54
CD44-205ENST00000352818 C9JAW5 83 aa5.43□□□□□ -1.54
CD44-205ENST00000352818 C6orf223Q8N319 242 aa5.43□□□□□ -1.54
CD44-205ENST00000352818 MTURNQ8N3F0 131 aa5.43□□□□□ -1.54
CD44-205ENST00000352818 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
CD44-205ENST00000352818 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
CD44-205ENST00000352818 TRACP01848 142 aa5.42□□□□□ -1.54
CD44-205ENST00000352818 HAMPP81172 84 aa5.42□□□□□ -1.54
CD44-205ENST00000352818 ANKRD29Q8N6D5 301 aa5.42□□□□□ -1.54
CD44-205ENST00000352818 PPDPFLQ8WWR9 84 aa5.42□□□□□ -1.54
CD44-205ENST00000352818 UPK3BQ9BT76 320 aa5.42□□□□□ -1.54
CD44-205ENST00000352818 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
CD44-205ENST00000352818 CLEC2BQ92478 149 aa5.41□□□□□ -1.54
CD44-205ENST00000352818 C2orf48Q96LS8 159 aa5.41□□□□□ -1.54
CD44-205ENST00000352818 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
CD44-205ENST00000352818 H0YGX0 51 aa5.4□□□□□ -1.54
CD44-205ENST00000352818 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
CD44-205ENST00000352818 UNQ6190/PRO20217Q6UXQ8 127 aa5.4□□□□□ -1.54
CD44-205ENST00000352818 VPS25Q9BRG1 176 aa5.4□□□□□ -1.54
CD44-205ENST00000352818 LINC00588Q9Y4M8 146 aa5.4□□□□□ -1.54
CD44-205ENST00000352818 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
CD44-205ENST00000352818 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
CD44-205ENST00000352818 UBE2DNLQ8IWF7 75 aa5.39□□□□□ -1.55
CD44-205ENST00000352818 C15orf56Q8N910 161 aa5.39□□□□□ -1.55
CD44-205ENST00000352818 SMIM11BQ8TCY0 68 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms