RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ORMDL1Q9P0S3 153 aa9.11□□□□□ -0.95
CASC4-202ENST00000345795 FUSP35637 526 aaKnown RBP eCLIP9.1□□□□□ -0.95
CASC4-202ENST00000345795 Q6ZQY7 126 aa9.1□□□□□ -0.95
CASC4-202ENST00000345795 IL17DQ8TAD2 202 aa9.1□□□□□ -0.95
CASC4-202ENST00000345795 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
CASC4-202ENST00000345795 FAM236AA0A1B0GUQ0 79 aa9.09□□□□□ -0.95
CASC4-202ENST00000345795 FAM236BA0A1B0GV22 79 aa9.09□□□□□ -0.95
CASC4-202ENST00000345795 TGP01266 2768 aa9.08□□□□□ -0.96
CASC4-202ENST00000345795 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
CASC4-202ENST00000345795 Q6ZRU5 148 aa9.08□□□□□ -0.96
CASC4-202ENST00000345795 IGLV5-45A0A087WSX0 123 aa9.07□□□□□ -0.96
CASC4-202ENST00000345795 H3BT86 120 aa9.07□□□□□ -0.96
CASC4-202ENST00000345795 UBE2BP63146 152 aa9.07□□□□□ -0.96
CASC4-202ENST00000345795 Q8IZM0 81 aa9.07□□□□□ -0.96
CASC4-202ENST00000345795 CXCL5P42830 114 aa9.06□□□□□ -0.96
CASC4-202ENST00000345795 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
CASC4-202ENST00000345795 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
CASC4-202ENST00000345795 TIMM17BO60830 172 aa9.06□□□□□ -0.96
CASC4-202ENST00000345795 A0A087WVE0 104 aa9.05□□□□□ -0.96
CASC4-202ENST00000345795 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
CASC4-202ENST00000345795 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
CASC4-202ENST00000345795 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
CASC4-202ENST00000345795 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
CASC4-202ENST00000345795 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
CASC4-202ENST00000345795 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
CASC4-202ENST00000345795 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
CASC4-202ENST00000345795 H0YGX0 51 aa9.03□□□□□ -0.96
CASC4-202ENST00000345795 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
CASC4-202ENST00000345795 DIRC1Q969H9 104 aa9.02□□□□□ -0.97
CASC4-202ENST00000345795 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 C3orf84H3BNL1 204 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 CASC10Q5T4H9 136 aa9.01□□□□□ -0.97
CASC4-202ENST00000345795 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
CASC4-202ENST00000345795 TRAV23DV6A0A075B6W5 121 aa9□□□□□ -0.97
CASC4-202ENST00000345795 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
CASC4-202ENST00000345795 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
CASC4-202ENST00000345795 MDFIQ99750 246 aa8.98□□□□□ -0.97
CASC4-202ENST00000345795 TRAV10A0A0B4J240 114 aa8.98□□□□□ -0.97
CASC4-202ENST00000345795 ANK3Q12955 4377 aaKnown RBP8.98□□□□□ -0.97
CASC4-202ENST00000345795 RPL28P46779 137 aaKnown RBP8.97□□□□□ -0.97
CASC4-202ENST00000345795 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
CASC4-202ENST00000345795 COX7BP24311 80 aa8.97□□□□□ -0.97
CASC4-202ENST00000345795 TRACP01848 142 aa8.96□□□□□ -0.97
CASC4-202ENST00000345795 RBM3P98179 157 aaKnown RBP8.96□□□□□ -0.97
CASC4-202ENST00000345795 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
CASC4-202ENST00000345795 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
CASC4-202ENST00000345795 K7EIL1 84 aa8.95□□□□□ -0.98
CASC4-202ENST00000345795 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
CASC4-202ENST00000345795 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
CASC4-202ENST00000345795 Q8NDZ9 215 aa8.95□□□□□ -0.98
CASC4-202ENST00000345795 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
CASC4-202ENST00000345795 LINC00588Q9Y4M8 146 aa8.94□□□□□ -0.98
CASC4-202ENST00000345795 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
CASC4-202ENST00000345795 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
CASC4-202ENST00000345795 Q8N814 137 aa8.93□□□□□ -0.98
CASC4-202ENST00000345795 A0A1B0GX51 115 aa8.93□□□□□ -0.98
CASC4-202ENST00000345795 LINC00846Q9NV44 126 aa8.93□□□□□ -0.98
CASC4-202ENST00000345795 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 CHTF8P0CG12 524 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 Q6ZRP5 223 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.91□□□□□ -0.98
CASC4-202ENST00000345795 Q8N9L7 120 aa8.91□□□□□ -0.98
CASC4-202ENST00000345795 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
CASC4-202ENST00000345795 PRLHP81277 87 aa8.89□□□□□ -0.99
CASC4-202ENST00000345795 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
CASC4-202ENST00000345795 CCKP06307 115 aa8.89□□□□□ -0.99
CASC4-202ENST00000345795 LINC00612Q8N6U2 182 aa8.89□□□□□ -0.99
CASC4-202ENST00000345795 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
CASC4-202ENST00000345795 RMI2Q96E14 147 aa8.87□□□□□ -0.99
CASC4-202ENST00000345795 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
CASC4-202ENST00000345795 LY6G6CO95867 125 aa8.86□□□□□ -0.99
CASC4-202ENST00000345795 LRCOL1A6NCL2 159 aa8.86□□□□□ -0.99
CASC4-202ENST00000345795 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
CASC4-202ENST00000345795 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
CASC4-202ENST00000345795 LINC00643Q86TS7 51 aa8.86□□□□□ -0.99
CASC4-202ENST00000345795 F8WEM9 126 aa8.85□□□□□ -0.99
CASC4-202ENST00000345795 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
CASC4-202ENST00000345795 COX17Q14061 63 aa8.85□□□□□ -0.99
CASC4-202ENST00000345795 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -1
CASC4-202ENST00000345795 JMJD7-PLA2G4BH0Y9G9 81 aa8.83□□□□□ -1
CASC4-202ENST00000345795 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
CASC4-202ENST00000345795 C15orf56Q8N910 161 aa8.83□□□□□ -1
CASC4-202ENST00000345795 M0R378 163 aa8.83□□□□□ -1
CASC4-202ENST00000345795 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
CASC4-202ENST00000345795 LINC00575Q6W349 94 aa8.83□□□□□ -1
CASC4-202ENST00000345795 C7orf33Q8WU49 177 aa8.82□□□□□ -1
CASC4-202ENST00000345795 UPK3BQ9BT76 320 aa8.82□□□□□ -1
CASC4-202ENST00000345795 UBE2AP49459 152 aa8.82□□□□□ -1
CASC4-202ENST00000345795 NREPQ16612 68 aa8.82□□□□□ -1
CASC4-202ENST00000345795 M0QXV9 152 aa8.81□□□□□ -1
CASC4-202ENST00000345795 ACYP1P07311 99 aa8.81□□□□□ -1
CASC4-202ENST00000345795 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
CASC4-202ENST00000345795 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
CASC4-202ENST00000345795 GHRHP01286 108 aa8.8□□□□□ -1
CASC4-202ENST00000345795 PRR34Q9NV39 138 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms