RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
CLCN1-201ENST00000343257 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
CLCN1-201ENST00000343257 CHCHD10Q8WYQ3 142 aaPredicted RBP10.15□□□□□ -0.78
CLCN1-201ENST00000343257 DEFB4AO15263 64 aa10.15□□□□□ -0.78
CLCN1-201ENST00000343257 BBC3Q96PG8 261 aaPredicted RBP10.15□□□□□ -0.78
CLCN1-201ENST00000343257 MTORP42345 2549 aa10.14□□□□□ -0.79
CLCN1-201ENST00000343257 DAD1P61803 113 aa10.14□□□□□ -0.79
CLCN1-201ENST00000343257 KLKP1Q107X0 134 aa10.14□□□□□ -0.79
CLCN1-201ENST00000343257 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
CLCN1-201ENST00000343257 C16orf95Q9H693 158 aa10.14□□□□□ -0.79
CLCN1-201ENST00000343257 SMIM26A0A096LP01 95 aa10.13□□□□□ -0.79
CLCN1-201ENST00000343257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.13□□□□□ -0.79
CLCN1-201ENST00000343257 PIEZO1Q92508 2521 aa10.13□□□□□ -0.79
CLCN1-201ENST00000343257 IGHV4-31P0DP07 118 aa10.12□□□□□ -0.79
CLCN1-201ENST00000343257 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
CLCN1-201ENST00000343257 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
CLCN1-201ENST00000343257 MIFP14174 115 aa10.11□□□□□ -0.79
CLCN1-201ENST00000343257 ZNF469Q96JG9 3925 aaPredicted RBP10.11□□□□□ -0.79
CLCN1-201ENST00000343257 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
CLCN1-201ENST00000343257 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
CLCN1-201ENST00000343257 NREPQ16612 68 aa10.1□□□□□ -0.79
CLCN1-201ENST00000343257 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
CLCN1-201ENST00000343257 DSCR9P59020 149 aa10.09□□□□□ -0.79
CLCN1-201ENST00000343257 REG3AQ06141 175 aa10.09□□□□□ -0.79
CLCN1-201ENST00000343257 CD164L2Q6UWJ8 174 aa10.09□□□□□ -0.79
CLCN1-201ENST00000343257 ACANP16112 2415 aa10.08□□□□□ -0.8
CLCN1-201ENST00000343257 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
CLCN1-201ENST00000343257 BPY2O14599 106 aa10.07□□□□□ -0.8
CLCN1-201ENST00000343257 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
CLCN1-201ENST00000343257 TMEM254Q8TBM7 123 aa10.07□□□□□ -0.8
CLCN1-201ENST00000343257 CYSRT1A8MQ03 144 aa10.06□□□□□ -0.8
CLCN1-201ENST00000343257 KRTAP10-9P60411 292 aa10.06□□□□□ -0.8
CLCN1-201ENST00000343257 FSHBP01225 129 aa10.06□□□□□ -0.8
CLCN1-201ENST00000343257 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
CLCN1-201ENST00000343257 COX17Q14061 63 aa10.06□□□□□ -0.8
CLCN1-201ENST00000343257 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
CLCN1-201ENST00000343257 HTN3P15516 51 aa10.04□□□□□ -0.8
CLCN1-201ENST00000343257 CXCL6P80162 114 aa10.04□□□□□ -0.8
CLCN1-201ENST00000343257 C19orf73Q9NVV2 129 aa10.04□□□□□ -0.8
CLCN1-201ENST00000343257 C3orf84H3BNL1 204 aa10.04□□□□□ -0.8
CLCN1-201ENST00000343257 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
CLCN1-201ENST00000343257 IGSF10Q6WRI0 2623 aa10.03□□□□□ -0.8
CLCN1-201ENST00000343257 PRO0255Q9UI72 69 aa10.02□□□□□ -0.81
CLCN1-201ENST00000343257 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.81
CLCN1-201ENST00000343257 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
CLCN1-201ENST00000343257 BCE1O60756 84 aa10.01□□□□□ -0.81
CLCN1-201ENST00000343257 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
CLCN1-201ENST00000343257 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
CLCN1-201ENST00000343257 KLK12Q9UKR0 248 aa10.01□□□□□ -0.81
CLCN1-201ENST00000343257 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
CLCN1-201ENST00000343257 COX7BP24311 80 aa10□□□□□ -0.81
CLCN1-201ENST00000343257 ZNF462Q96JM2 2506 aa10□□□□□ -0.81
CLCN1-201ENST00000343257 PRB2P02812 416 aaPredicted RBP10□□□□□ -0.81
CLCN1-201ENST00000343257 DEFB105AQ8NG35 78 aa10□□□□□ -0.81
CLCN1-201ENST00000343257 ZNF73O43830 326 aaPredicted RBP10□□□□□ -0.81
CLCN1-201ENST00000343257 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
CLCN1-201ENST00000343257 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
CLCN1-201ENST00000343257 FLNAP21333 2647 aaKnown RBP9.98□□□□□ -0.81
CLCN1-201ENST00000343257 PDE6GP18545 87 aa9.98□□□□□ -0.81
CLCN1-201ENST00000343257 ITPR3Q14573 2671 aa9.97□□□□□ -0.81
CLCN1-201ENST00000343257 NDUFC1O43677 76 aa9.97□□□□□ -0.81
CLCN1-201ENST00000343257 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLCN1-201ENST00000343257 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
CLCN1-201ENST00000343257 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
CLCN1-201ENST00000343257 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
CLCN1-201ENST00000343257 PRYO14603 147 aa9.96□□□□□ -0.81
CLCN1-201ENST00000343257 C1orf195Q5TG92 126 aa9.96□□□□□ -0.81
CLCN1-201ENST00000343257 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
CLCN1-201ENST00000343257 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
CLCN1-201ENST00000343257 CMC4P56277 68 aaPredicted RBP9.93□□□□□ -0.82
CLCN1-201ENST00000343257 PRR4Q16378 134 aa9.93□□□□□ -0.82
CLCN1-201ENST00000343257 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
CLCN1-201ENST00000343257 X6R8D5 127 aa9.93□□□□□ -0.82
CLCN1-201ENST00000343257 ESRGQ1W209 222 aa9.91□□□□□ -0.82
CLCN1-201ENST00000343257 ELOF1P60002 83 aaKnown RBP9.9□□□□□ -0.82
CLCN1-201ENST00000343257 OCR1Q9BZK8 76 aa9.9□□□□□ -0.82
CLCN1-201ENST00000343257 ATP5EP56381 51 aaPredicted RBP9.89□□□□□ -0.83
CLCN1-201ENST00000343257 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
CLCN1-201ENST00000343257 VWFP04275 2813 aa9.89□□□□□ -0.83
CLCN1-201ENST00000343257 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
CLCN1-201ENST00000343257 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
CLCN1-201ENST00000343257 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 Q6ZTC4 211 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 V9GYY9 64 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 F8P00451 2351 aa9.88□□□□□ -0.83
CLCN1-201ENST00000343257 DEFB113Q30KQ7 82 aa9.86□□□□□ -0.83
CLCN1-201ENST00000343257 PSPHP1O15172 72 aa9.85□□□□□ -0.83
CLCN1-201ENST00000343257 VPREB1P12018 145 aa9.85□□□□□ -0.83
CLCN1-201ENST00000343257 H3BQ85 93 aa9.83□□□□□ -0.84
CLCN1-201ENST00000343257 SEC61GP60059 68 aa9.83□□□□□ -0.84
CLCN1-201ENST00000343257 Q6ZRU5 148 aa9.83□□□□□ -0.84
CLCN1-201ENST00000343257 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
CLCN1-201ENST00000343257 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
CLCN1-201ENST00000343257 F8WDY8 70 aa9.8□□□□□ -0.84
CLCN1-201ENST00000343257 M0R378 163 aa9.8□□□□□ -0.84
CLCN1-201ENST00000343257 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
CLCN1-201ENST00000343257 LELP1Q5T871 98 aa9.79□□□□□ -0.84
CLCN1-201ENST00000343257 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms