RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 VCANP13611 3396 aa4.97□□□□□ -1.61
VCAN-202ENST00000342785 Q8N3U1 123 aa4.96□□□□□ -1.61
VCAN-202ENST00000342785 SZT2Q5T011 3432 aa4.96□□□□□ -1.61
VCAN-202ENST00000342785 UBR5O95071 2799 aaPredicted RBP4.96□□□□□ -1.62
VCAN-202ENST00000342785 GCN1Q92616 2671 aaKnown RBP4.96□□□□□ -1.62
VCAN-202ENST00000342785 C2orf48Q96LS8 159 aa4.96□□□□□ -1.62
VCAN-202ENST00000342785 IGSF10Q6WRI0 2623 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 Q6ZVQ6 151 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 TEX15Q9BXT5 2789 aa4.95□□□□□ -1.62
VCAN-202ENST00000342785 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
VCAN-202ENST00000342785 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
VCAN-202ENST00000342785 NDUFC1O43677 76 aa4.94□□□□□ -1.62
VCAN-202ENST00000342785 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
VCAN-202ENST00000342785 FREM2Q5SZK8 3169 aa4.94□□□□□ -1.62
VCAN-202ENST00000342785 GIG44P09565 113 aaPredicted RBP4.93□□□□□ -1.62
VCAN-202ENST00000342785 C6orf48Q9UBA6 75 aa4.93□□□□□ -1.62
VCAN-202ENST00000342785 CSNK1G2-AS1Q8NCQ2 148 aa4.93□□□□□ -1.62
VCAN-202ENST00000342785 LINC01547P58512 204 aaPredicted RBP4.92□□□□□ -1.62
VCAN-202ENST00000342785 PRR4Q16378 134 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 ESRGQ1W209 222 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 ATMQ13315 3056 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 SETXQ7Z333 2677 aaKnown RBP4.92□□□□□ -1.62
VCAN-202ENST00000342785 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 C19orf73Q9NVV2 129 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 CELSR3Q9NYQ7 3312 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 M0R2N4 97 aa4.92□□□□□ -1.62
VCAN-202ENST00000342785 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
VCAN-202ENST00000342785 Q8NAQ8 132 aa4.91□□□□□ -1.62
VCAN-202ENST00000342785 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
VCAN-202ENST00000342785 PLAC8L1A1L4L8 177 aa4.91□□□□□ -1.62
VCAN-202ENST00000342785 F8WDY8 70 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 C7orf33Q8WU49 177 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 NBEAL2Q6ZNJ1 2754 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 SPATA3Q8NHX4 192 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 IGKV4-1P06312 121 aa4.9□□□□□ -1.62
VCAN-202ENST00000342785 TACC2O95359 2948 aa4.9□□□□□ -1.63
VCAN-202ENST00000342785 REG3GQ6UW15 175 aa4.89□□□□□ -1.63
VCAN-202ENST00000342785 MRPL55Q7Z7F7 128 aaKnown RBP4.89□□□□□ -1.63
VCAN-202ENST00000342785 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
VCAN-202ENST00000342785 Q8N9L7 120 aa4.89□□□□□ -1.63
VCAN-202ENST00000342785 FAM30AQ9NZY2 134 aa4.89□□□□□ -1.63
VCAN-202ENST00000342785 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
VCAN-202ENST00000342785 A0A087WSZ3 146 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 FRYLO94915 3013 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 SMIM26A0A096LP01 95 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 PRYO14603 147 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 CRYGAP11844 174 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 H3BNG1 76 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 KIAA0087Q14695 138 aa4.88□□□□□ -1.63
VCAN-202ENST00000342785 SPINK6Q6UWN8 80 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 HRCT1Q6UXD1 115 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 CHKB-CPT1BH3BT56 60 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 ITPR1Q14643 2758 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 LRCOL1A6NCL2 159 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 ZZEF1O43149 2961 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 CXCL6P80162 114 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 SMCR5Q8TEV8 140 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
VCAN-202ENST00000342785 IGLV9-49A0A0B4J1Y8 123 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 PRLHP81277 87 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 LINC00167Q96N53 147 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 KALRNO60229 2985 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 ELOF1P60002 83 aaKnown RBP4.86□□□□□ -1.63
VCAN-202ENST00000342785 Q6ZQT0 140 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 NHLRC4P0CG21 123 aaPredicted RBP4.86□□□□□ -1.63
VCAN-202ENST00000342785 LINC00208Q96KT6 92 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
VCAN-202ENST00000342785 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 COL12A1Q99715 3063 aa4.86□□□□□ -1.63
VCAN-202ENST00000342785 LINC00612Q8N6U2 182 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
VCAN-202ENST00000342785 Q9BRP9 147 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 KRTAP24-1Q3LI83 254 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 KRTAP1-3Q8IUG1 177 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 FAM104AQ969W3 186 aa4.85□□□□□ -1.63
VCAN-202ENST00000342785 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
VCAN-202ENST00000342785 VPREB1P12018 145 aa4.84□□□□□ -1.63
VCAN-202ENST00000342785 LOC110117498A0A087WWA1 95 aa4.84□□□□□ -1.63
VCAN-202ENST00000342785 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
VCAN-202ENST00000342785 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
VCAN-202ENST00000342785 DNAH14Q0VDD8 3507 aa4.84□□□□□ -1.64
VCAN-202ENST00000342785 DMXL2Q8TDJ6 3036 aa4.84□□□□□ -1.64
VCAN-202ENST00000342785 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
VCAN-202ENST00000342785 A0A0U1RQV1 116 aa4.83□□□□□ -1.64
VCAN-202ENST00000342785 Q6ZRP5 223 aa4.82□□□□□ -1.64
VCAN-202ENST00000342785 KRTAP10-3P60369 221 aa4.82□□□□□ -1.64
VCAN-202ENST00000342785 NUPR2A6NF83 97 aa4.82□□□□□ -1.64
VCAN-202ENST00000342785 BCE1O60756 84 aa4.82□□□□□ -1.64
VCAN-202ENST00000342785 KRTAP1-1Q07627 177 aa4.82□□□□□ -1.64
VCAN-202ENST00000342785 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
VCAN-202ENST00000342785 Q6ZRX8 168 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms