RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 M0R2T5 61 aa8.9□□□□□ -0.98
NECTIN1-202ENST00000340882 ATP5LO75964 103 aa8.9□□□□□ -0.98
NECTIN1-202ENST00000340882 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
NECTIN1-202ENST00000340882 ATP5L2Q7Z4Y8 100 aa8.9□□□□□ -0.98
NECTIN1-202ENST00000340882 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.98
NECTIN1-202ENST00000340882 USH2AO75445 5202 aa8.89□□□□□ -0.99
NECTIN1-202ENST00000340882 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
NECTIN1-202ENST00000340882 MOBPQ13875 183 aa8.89□□□□□ -0.99
NECTIN1-202ENST00000340882 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
NECTIN1-202ENST00000340882 SLC25A20O43772 301 aa8.88□□□□□ -0.99
NECTIN1-202ENST00000340882 LINC00483Q53H64 154 aa8.88□□□□□ -0.99
NECTIN1-202ENST00000340882 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
NECTIN1-202ENST00000340882 IGLV9-49A0A0B4J1Y8 123 aa8.87□□□□□ -0.99
NECTIN1-202ENST00000340882 K7EMI3 77 aa8.87□□□□□ -0.99
NECTIN1-202ENST00000340882 ERASQ7Z444 233 aa8.87□□□□□ -0.99
NECTIN1-202ENST00000340882 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
NECTIN1-202ENST00000340882 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
NECTIN1-202ENST00000340882 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
NECTIN1-202ENST00000340882 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
NECTIN1-202ENST00000340882 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
NECTIN1-202ENST00000340882 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
NECTIN1-202ENST00000340882 KRTAP4-16G5E9R7 235 aaPredicted RBP8.83□□□□□ -1
NECTIN1-202ENST00000340882 IFITM2Q01629 132 aa8.82□□□□□ -1
NECTIN1-202ENST00000340882 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
NECTIN1-202ENST00000340882 C9orf92A6NGG3 77 aa8.81□□□□□ -1
NECTIN1-202ENST00000340882 ERC2-IT1O76042 136 aa8.81□□□□□ -1
NECTIN1-202ENST00000340882 SPRR1AP35321 89 aa8.81□□□□□ -1
NECTIN1-202ENST00000340882 COX17Q14061 63 aa8.81□□□□□ -1
NECTIN1-202ENST00000340882 MRPL18Q9H0U6 180 aaKnown RBP8.81□□□□□ -1
NECTIN1-202ENST00000340882 PRYO14603 147 aa8.8□□□□□ -1
NECTIN1-202ENST00000340882 G0S2P27469 103 aa8.79□□□□□ -1
NECTIN1-202ENST00000340882 H3BRM9 83 aa8.78□□□□□ -1
NECTIN1-202ENST00000340882 PMVKQ15126 192 aa8.78□□□□□ -1
NECTIN1-202ENST00000340882 FCGBPQ9Y6R7 5405 aaPredicted RBP8.78□□□□□ -1
NECTIN1-202ENST00000340882 KIAA1644Q3SXP7 199 aa8.77□□□□□ -1.01
NECTIN1-202ENST00000340882 ZNF22P17026 224 aaPredicted RBP8.76□□□□□ -1.01
NECTIN1-202ENST00000340882 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
NECTIN1-202ENST00000340882 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
NECTIN1-202ENST00000340882 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
NECTIN1-202ENST00000340882 NCR3O14931 201 aa8.75□□□□□ -1.01
NECTIN1-202ENST00000340882 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
NECTIN1-202ENST00000340882 PEA15Q15121 130 aa8.75□□□□□ -1.01
NECTIN1-202ENST00000340882 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
NECTIN1-202ENST00000340882 B5MCH6 92 aa8.73□□□□□ -1.01
NECTIN1-202ENST00000340882 LINC00158P58513 81 aa8.73□□□□□ -1.01
NECTIN1-202ENST00000340882 LINC01546A6NGU7 62 aa8.72□□□□□ -1.01
NECTIN1-202ENST00000340882 Q9BRP9 147 aa8.72□□□□□ -1.01
NECTIN1-202ENST00000340882 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
NECTIN1-202ENST00000340882 SLC7A5P1Q8MH63 180 aa8.71□□□□□ -1.02
NECTIN1-202ENST00000340882 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
NECTIN1-202ENST00000340882 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
NECTIN1-202ENST00000340882 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
NECTIN1-202ENST00000340882 NDUFA6P56556 154 aa8.67□□□□□ -1.02
NECTIN1-202ENST00000340882 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 C11orf86A6NJI1 115 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 CLLU1Q5K131 121 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 ANAPC16Q96DE5 110 aa8.66□□□□□ -1.02
NECTIN1-202ENST00000340882 TRAV9-1A0A075B6T8 112 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 A0A096LNJ9 63 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 TMEM170BQ5T4T1 132 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
NECTIN1-202ENST00000340882 Q6ZRX8 168 aa8.62□□□□□ -1.03
NECTIN1-202ENST00000340882 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
NECTIN1-202ENST00000340882 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
NECTIN1-202ENST00000340882 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
NECTIN1-202ENST00000340882 LIMD2Q9BT23 127 aa8.59□□□□□ -1.03
NECTIN1-202ENST00000340882 DDTP30046 118 aa8.57□□□□□ -1.04
NECTIN1-202ENST00000340882 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
NECTIN1-202ENST00000340882 COMMD7Q86VX2 200 aa8.57□□□□□ -1.04
NECTIN1-202ENST00000340882 SMCO4Q9NRQ5 59 aa8.57□□□□□ -1.04
NECTIN1-202ENST00000340882 BAGE3Q86Y29 109 aa8.56□□□□□ -1.04
NECTIN1-202ENST00000340882 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
NECTIN1-202ENST00000340882 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
NECTIN1-202ENST00000340882 CFC1P0CG37 223 aa8.55□□□□□ -1.04
NECTIN1-202ENST00000340882 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
NECTIN1-202ENST00000340882 SYNE2Q8WXH0 6885 aaKnown RBP8.55□□□□□ -1.04
NECTIN1-202ENST00000340882 S100A12P80511 92 aa8.54□□□□□ -1.04
NECTIN1-202ENST00000340882 Q6Q795 121 aa8.54□□□□□ -1.04
NECTIN1-202ENST00000340882 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
NECTIN1-202ENST00000340882 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
NECTIN1-202ENST00000340882 H7C2G1 150 aa8.51□□□□□ -1.05
NECTIN1-202ENST00000340882 LCE2BO14633 110 aa8.51□□□□□ -1.05
NECTIN1-202ENST00000340882 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
NECTIN1-202ENST00000340882 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
NECTIN1-202ENST00000340882 HBDP02042 147 aa8.49□□□□□ -1.05
NECTIN1-202ENST00000340882 UQCC3Q6UW78 93 aa8.49□□□□□ -1.05
NECTIN1-202ENST00000340882 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
NECTIN1-202ENST00000340882 SPRR1BP22528 89 aa8.48□□□□□ -1.05
NECTIN1-202ENST00000340882 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
NECTIN1-202ENST00000340882 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
NECTIN1-202ENST00000340882 HERV-K104P63124 156 aa8.47□□□□□ -1.05
NECTIN1-202ENST00000340882 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
NECTIN1-202ENST00000340882 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.06
NECTIN1-202ENST00000340882 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms