RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 IGHV4-28A0A0C4DH34 117 aa9.86□□□□□ -0.83
CPSF7-201ENST00000340437 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
CPSF7-201ENST00000340437 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
CPSF7-201ENST00000340437 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
CPSF7-201ENST00000340437 A0A1B0GUV1 79 aa9.85□□□□□ -0.83
CPSF7-201ENST00000340437 HAMPP81172 84 aa9.85□□□□□ -0.83
CPSF7-201ENST00000340437 RETNQ9HD89 108 aa9.85□□□□□ -0.83
CPSF7-201ENST00000340437 C16orf95Q9H693 158 aa9.85□□□□□ -0.83
CPSF7-201ENST00000340437 CCKP06307 115 aa9.84□□□□□ -0.83
CPSF7-201ENST00000340437 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
CPSF7-201ENST00000340437 LINC01561Q8N1V8 128 aa9.84□□□□□ -0.83
CPSF7-201ENST00000340437 SVIPQ8NHG7 77 aa9.84□□□□□ -0.83
CPSF7-201ENST00000340437 CYSRT1A8MQ03 144 aa9.83□□□□□ -0.84
CPSF7-201ENST00000340437 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
CPSF7-201ENST00000340437 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
CPSF7-201ENST00000340437 Q6JHZ5 121 aa9.83□□□□□ -0.84
CPSF7-201ENST00000340437 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
CPSF7-201ENST00000340437 C2orf48Q96LS8 159 aa9.81□□□□□ -0.84
CPSF7-201ENST00000340437 JMJD7-PLA2G4BH0Y9G9 81 aa9.8□□□□□ -0.84
CPSF7-201ENST00000340437 GHRHP01286 108 aa9.8□□□□□ -0.84
CPSF7-201ENST00000340437 Q6ZQY7 126 aa9.8□□□□□ -0.84
CPSF7-201ENST00000340437 M0R2N4 97 aa9.8□□□□□ -0.84
CPSF7-201ENST00000340437 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
CPSF7-201ENST00000340437 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
CPSF7-201ENST00000340437 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
CPSF7-201ENST00000340437 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
CPSF7-201ENST00000340437 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
CPSF7-201ENST00000340437 LYRM9A8MSI8 78 aa9.77□□□□□ -0.84
CPSF7-201ENST00000340437 UPK3BQ9BT76 320 aa9.77□□□□□ -0.85
CPSF7-201ENST00000340437 TRBV10-3A0A0K0K1G6 114 aa9.77□□□□□ -0.85
CPSF7-201ENST00000340437 PKD1L1Q8TDX9 2849 aa9.77□□□□□ -0.85
CPSF7-201ENST00000340437 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
CPSF7-201ENST00000340437 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
CPSF7-201ENST00000340437 LINC00612Q8N6U2 182 aa9.76□□□□□ -0.85
CPSF7-201ENST00000340437 TRRAPQ9Y4A5 3859 aa9.76□□□□□ -0.85
CPSF7-201ENST00000340437 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
CPSF7-201ENST00000340437 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
CPSF7-201ENST00000340437 APOC4P55056 127 aa9.75□□□□□ -0.85
CPSF7-201ENST00000340437 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
CPSF7-201ENST00000340437 COX17Q14061 63 aa9.75□□□□□ -0.85
CPSF7-201ENST00000340437 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
CPSF7-201ENST00000340437 NDUFC2O95298 119 aa9.74□□□□□ -0.85
CPSF7-201ENST00000340437 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-201ENST00000340437 ANK3Q12955 4377 aaKnown RBP9.73□□□□□ -0.85
CPSF7-201ENST00000340437 CRYGAP11844 174 aa9.73□□□□□ -0.85
CPSF7-201ENST00000340437 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
CPSF7-201ENST00000340437 J3KT08 172 aa9.72□□□□□ -0.85
CPSF7-201ENST00000340437 IGKV2D-24A0A075B6R9 120 aa9.71□□□□□ -0.85
CPSF7-201ENST00000340437 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.85
CPSF7-201ENST00000340437 C6orf48Q9UBA6 75 aa9.71□□□□□ -0.86
CPSF7-201ENST00000340437 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
CPSF7-201ENST00000340437 LELP1Q5T871 98 aa9.7□□□□□ -0.86
CPSF7-201ENST00000340437 DEFB105AQ8NG35 78 aa9.7□□□□□ -0.86
CPSF7-201ENST00000340437 IGHV4-30-4P0DP06 118 aa9.69□□□□□ -0.86
CPSF7-201ENST00000340437 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
CPSF7-201ENST00000340437 Q8NAQ8 132 aa9.69□□□□□ -0.86
CPSF7-201ENST00000340437 Q6ZQT0 140 aa9.68□□□□□ -0.86
CPSF7-201ENST00000340437 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
CPSF7-201ENST00000340437 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
CPSF7-201ENST00000340437 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
CPSF7-201ENST00000340437 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-201ENST00000340437 COX7BP24311 80 aa9.66□□□□□ -0.86
CPSF7-201ENST00000340437 Q6ZVQ6 151 aa9.66□□□□□ -0.86
CPSF7-201ENST00000340437 TENM3Q9P273 2699 aa9.66□□□□□ -0.86
CPSF7-201ENST00000340437 LINC01547P58512 204 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-201ENST00000340437 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
CPSF7-201ENST00000340437 MIFP14174 115 aa9.65□□□□□ -0.86
CPSF7-201ENST00000340437 Q8N9L7 120 aa9.64□□□□□ -0.87
CPSF7-201ENST00000340437 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
CPSF7-201ENST00000340437 Q6ZRU5 148 aa9.64□□□□□ -0.87
CPSF7-201ENST00000340437 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
CPSF7-201ENST00000340437 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-201ENST00000340437 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
CPSF7-201ENST00000340437 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
CPSF7-201ENST00000340437 Q6ZTC4 211 aa9.62□□□□□ -0.87
CPSF7-201ENST00000340437 TMEM258P61165 79 aa9.62□□□□□ -0.87
CPSF7-201ENST00000340437 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
CPSF7-201ENST00000340437 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
CPSF7-201ENST00000340437 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
CPSF7-201ENST00000340437 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
CPSF7-201ENST00000340437 RMI2Q96E14 147 aa9.59□□□□□ -0.87
CPSF7-201ENST00000340437 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
CPSF7-201ENST00000340437 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
CPSF7-201ENST00000340437 OXTP01178 125 aa9.58□□□□□ -0.88
CPSF7-201ENST00000340437 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
CPSF7-201ENST00000340437 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
CPSF7-201ENST00000340437 ESRGQ1W209 222 aa9.55□□□□□ -0.88
CPSF7-201ENST00000340437 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
CPSF7-201ENST00000340437 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
CPSF7-201ENST00000340437 VPREB1P12018 145 aa9.55□□□□□ -0.88
CPSF7-201ENST00000340437 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
CPSF7-201ENST00000340437 TM2D3Q9BRN9 247 aa9.54□□□□□ -0.88
CPSF7-201ENST00000340437 Q6ZRP5 223 aa9.54□□□□□ -0.88
CPSF7-201ENST00000340437 DEFB131BA0A096LNP1 70 aa9.54□□□□□ -0.88
CPSF7-201ENST00000340437 M0R378 163 aa9.54□□□□□ -0.88
CPSF7-201ENST00000340437 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
CPSF7-201ENST00000340437 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
CPSF7-201ENST00000340437 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms