RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CDK2AP2O75956 126 aa9.36□□□□□ -0.91
COL2A1-201ENST00000337299 SMR3AQ99954 134 aa9.36□□□□□ -0.91
COL2A1-201ENST00000337299 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
COL2A1-201ENST00000337299 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
COL2A1-201ENST00000337299 Q8IZM0 81 aa9.35□□□□□ -0.91
COL2A1-201ENST00000337299 TACC2O95359 2948 aa9.35□□□□□ -0.91
COL2A1-201ENST00000337299 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
COL2A1-201ENST00000337299 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
COL2A1-201ENST00000337299 A6NED7 52 aa9.34□□□□□ -0.91
COL2A1-201ENST00000337299 ZNF73O43830 326 aaPredicted RBP9.34□□□□□ -0.91
COL2A1-201ENST00000337299 ESRGQ1W209 222 aa9.34□□□□□ -0.91
COL2A1-201ENST00000337299 A0A096LNI7 61 aa9.34□□□□□ -0.92
COL2A1-201ENST00000337299 INAFM1C9JVW0 142 aa9.33□□□□□ -0.92
COL2A1-201ENST00000337299 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
COL2A1-201ENST00000337299 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
COL2A1-201ENST00000337299 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 HIGD2AQ9BW72 106 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 CYSTM1Q9H1C7 97 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 C6orf223Q8N319 242 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
COL2A1-201ENST00000337299 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
COL2A1-201ENST00000337299 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
COL2A1-201ENST00000337299 CHD6Q8TD26 2715 aa9.31□□□□□ -0.92
COL2A1-201ENST00000337299 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
COL2A1-201ENST00000337299 BEAN1Q3B7T3 259 aa9.3□□□□□ -0.92
COL2A1-201ENST00000337299 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
COL2A1-201ENST00000337299 H0Y9J4 135 aa9.29□□□□□ -0.92
COL2A1-201ENST00000337299 PSCAO43653 123 aa9.28□□□□□ -0.92
COL2A1-201ENST00000337299 APOC4P55056 127 aa9.28□□□□□ -0.92
COL2A1-201ENST00000337299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
COL2A1-201ENST00000337299 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
COL2A1-201ENST00000337299 IGSF10Q6WRI0 2623 aa9.28□□□□□ -0.92
COL2A1-201ENST00000337299 LINC00482Q8N8I6 264 aa9.28□□□□□ -0.92
COL2A1-201ENST00000337299 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
COL2A1-201ENST00000337299 SPATA3Q8NHX4 192 aa9.27□□□□□ -0.93
COL2A1-201ENST00000337299 LINC00208Q96KT6 92 aa9.26□□□□□ -0.93
COL2A1-201ENST00000337299 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
COL2A1-201ENST00000337299 DEFB116Q30KQ4 102 aa9.25□□□□□ -0.93
COL2A1-201ENST00000337299 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
COL2A1-201ENST00000337299 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
COL2A1-201ENST00000337299 COX17Q14061 63 aa9.25□□□□□ -0.93
COL2A1-201ENST00000337299 H7BZZ5 65 aa9.23□□□□□ -0.93
COL2A1-201ENST00000337299 Q6ZQT0 140 aa9.23□□□□□ -0.93
COL2A1-201ENST00000337299 LY6G6DO95868 133 aa9.23□□□□□ -0.93
COL2A1-201ENST00000337299 CXCL6P80162 114 aa9.22□□□□□ -0.93
COL2A1-201ENST00000337299 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.93
COL2A1-201ENST00000337299 WDFY3Q8IZQ1 3526 aa9.21□□□□□ -0.93
COL2A1-201ENST00000337299 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.93
COL2A1-201ENST00000337299 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
COL2A1-201ENST00000337299 M0R378 163 aa9.21□□□□□ -0.94
COL2A1-201ENST00000337299 NDUFB1O75438 58 aa9.2□□□□□ -0.94
COL2A1-201ENST00000337299 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
COL2A1-201ENST00000337299 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
COL2A1-201ENST00000337299 GCN1Q92616 2671 aaKnown RBP9.19□□□□□ -0.94
COL2A1-201ENST00000337299 LRBAP50851 2863 aa9.18□□□□□ -0.94
COL2A1-201ENST00000337299 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
COL2A1-201ENST00000337299 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
COL2A1-201ENST00000337299 C10orf25Q5T742 122 aa9.17□□□□□ -0.94
COL2A1-201ENST00000337299 WIPF1O43516 503 aa9.17□□□□□ -0.94
COL2A1-201ENST00000337299 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
COL2A1-201ENST00000337299 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
COL2A1-201ENST00000337299 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
COL2A1-201ENST00000337299 ITPR1Q14643 2758 aa9.16□□□□□ -0.94
COL2A1-201ENST00000337299 UBE2AP49459 152 aa9.15□□□□□ -0.94
COL2A1-201ENST00000337299 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
COL2A1-201ENST00000337299 OXTP01178 125 aa9.15□□□□□ -0.95
COL2A1-201ENST00000337299 Q5XG85 94 aa9.15□□□□□ -0.95
COL2A1-201ENST00000337299 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
COL2A1-201ENST00000337299 M0R2N4 97 aa9.14□□□□□ -0.95
COL2A1-201ENST00000337299 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
COL2A1-201ENST00000337299 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
COL2A1-201ENST00000337299 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
COL2A1-201ENST00000337299 BCE1O60756 84 aa9.13□□□□□ -0.95
COL2A1-201ENST00000337299 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
COL2A1-201ENST00000337299 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
COL2A1-201ENST00000337299 PCOTHQ58A44 107 aa9.11□□□□□ -0.95
COL2A1-201ENST00000337299 COL6A5A8TX70 2615 aa9.11□□□□□ -0.95
COL2A1-201ENST00000337299 NBEAL1Q6ZS30 2694 aa9.1□□□□□ -0.95
COL2A1-201ENST00000337299 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
COL2A1-201ENST00000337299 A8MUN3 132 aa9.1□□□□□ -0.95
COL2A1-201ENST00000337299 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
COL2A1-201ENST00000337299 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
COL2A1-201ENST00000337299 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
COL2A1-201ENST00000337299 LELP1Q5T871 98 aa9.09□□□□□ -0.95
COL2A1-201ENST00000337299 KPRPQ5T749 579 aaPredicted RBP9.09□□□□□ -0.95
COL2A1-201ENST00000337299 IGHV4-30-4P0DP06 118 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 FAM104AQ969W3 186 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 LAMA5O15230 3695 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 KIAA0087Q14695 138 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
COL2A1-201ENST00000337299 A0A087WSZ3 146 aa9.07□□□□□ -0.96
COL2A1-201ENST00000337299 F8WDY8 70 aa9.07□□□□□ -0.96
COL2A1-201ENST00000337299 DMDP11532 3685 aa9.06□□□□□ -0.96
COL2A1-201ENST00000337299 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
COL2A1-201ENST00000337299 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
COL2A1-201ENST00000337299 EGFEM1PQ0D2K5 195 aa9.05□□□□□ -0.96
COL2A1-201ENST00000337299 Q6ZRU5 148 aa9.05□□□□□ -0.96
COL2A1-201ENST00000337299 H0Y9P7 68 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms