RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 TMEM254Q8TBM7 123 aa11.1□□□□□ -0.63
TPCN1-201ENST00000335509 PCOTHQ58A44 107 aa11.09□□□□□ -0.63
TPCN1-201ENST00000335509 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
TPCN1-201ENST00000335509 RANBP2P49792 3224 aaKnown RBP11.09□□□□□ -0.63
TPCN1-201ENST00000335509 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
TPCN1-201ENST00000335509 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
TPCN1-201ENST00000335509 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
TPCN1-201ENST00000335509 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
TPCN1-201ENST00000335509 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
TPCN1-201ENST00000335509 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
TPCN1-201ENST00000335509 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
TPCN1-201ENST00000335509 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
TPCN1-201ENST00000335509 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
TPCN1-201ENST00000335509 TRBV7-6A0A0J9YX20 115 aa11.04□□□□□ -0.64
TPCN1-201ENST00000335509 IGLV5-52A0A0A0MRZ9 124 aa11.03□□□□□ -0.64
TPCN1-201ENST00000335509 FHL3Q13643 280 aa11.03□□□□□ -0.64
TPCN1-201ENST00000335509 A0A0C4DFX4 3053 aa11.03□□□□□ -0.64
TPCN1-201ENST00000335509 PSPHP1O15172 72 aa11.03□□□□□ -0.64
TPCN1-201ENST00000335509 KIAA0087Q14695 138 aa11.02□□□□□ -0.64
TPCN1-201ENST00000335509 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.64
TPCN1-201ENST00000335509 F8WDY8 70 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 C6orf48Q9UBA6 75 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 ITPR3Q14573 2671 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 SMCR5Q8TEV8 140 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 CFAP46Q8IYW2 2715 aa11.02□□□□□ -0.65
TPCN1-201ENST00000335509 RETNLBQ9BQ08 111 aa11.01□□□□□ -0.65
TPCN1-201ENST00000335509 H0Y9P7 68 aa11□□□□□ -0.65
TPCN1-201ENST00000335509 X6R8D5 127 aa11□□□□□ -0.65
TPCN1-201ENST00000335509 PMAIP1Q13794 54 aa10.99□□□□□ -0.65
TPCN1-201ENST00000335509 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
TPCN1-201ENST00000335509 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
TPCN1-201ENST00000335509 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
TPCN1-201ENST00000335509 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
TPCN1-201ENST00000335509 COL27A1Q8IZC6 1860 aaPredicted RBP10.97□□□□□ -0.65
TPCN1-201ENST00000335509 STAB1Q9NY15 2570 aa10.97□□□□□ -0.65
TPCN1-201ENST00000335509 CXCL6P80162 114 aa10.97□□□□□ -0.65
TPCN1-201ENST00000335509 CHD6Q8TD26 2715 aa10.96□□□□□ -0.65
TPCN1-201ENST00000335509 LAMA2P24043 3122 aaKnown RBP10.96□□□□□ -0.66
TPCN1-201ENST00000335509 MAP1AP78559 2803 aaPredicted RBP10.95□□□□□ -0.66
TPCN1-201ENST00000335509 SPINK1P00995 79 aa10.94□□□□□ -0.66
TPCN1-201ENST00000335509 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
TPCN1-201ENST00000335509 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
TPCN1-201ENST00000335509 SETXQ7Z333 2677 aaKnown RBP10.9□□□□□ -0.66
TPCN1-201ENST00000335509 C1orf64Q8NEQ6 169 aa10.9□□□□□ -0.66
TPCN1-201ENST00000335509 LITAFQ99732 161 aa10.9□□□□□ -0.66
TPCN1-201ENST00000335509 CRYGAP11844 174 aa10.89□□□□□ -0.67
TPCN1-201ENST00000335509 TEP1Q99973 2627 aaKnown RBP10.88□□□□□ -0.67
TPCN1-201ENST00000335509 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
TPCN1-201ENST00000335509 EIF4EBP3O60516 100 aaPredicted RBP10.87□□□□□ -0.67
TPCN1-201ENST00000335509 PCSK5Q92824 1860 aa10.87□□□□□ -0.67
TPCN1-201ENST00000335509 hDV103S1A0JD37 113 aa10.87□□□□□ -0.67
TPCN1-201ENST00000335509 ELOF1P60002 83 aaKnown RBP10.87□□□□□ -0.67
TPCN1-201ENST00000335509 Q6ZQT0 140 aa10.86□□□□□ -0.67
TPCN1-201ENST00000335509 Q8NAQ8 132 aa10.86□□□□□ -0.67
TPCN1-201ENST00000335509 MDFIQ99750 246 aa10.85□□□□□ -0.67
TPCN1-201ENST00000335509 MGAQ8IWI9 3026 aa10.84□□□□□ -0.67
TPCN1-201ENST00000335509 FSHBP01225 129 aa10.84□□□□□ -0.67
TPCN1-201ENST00000335509 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
TPCN1-201ENST00000335509 Q8NBF4 154 aa10.83□□□□□ -0.68
TPCN1-201ENST00000335509 COL4A2P08572 1712 aa10.83□□□□□ -0.68
TPCN1-201ENST00000335509 MOBPQ13875 183 aa10.83□□□□□ -0.68
TPCN1-201ENST00000335509 IGKV2D-30A0A075B6S6 120 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 ST20-AS1Q8NBB2 130 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 H3BNG1 76 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 NOTCH1P46531 2555 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 Q6ZRX8 168 aa10.82□□□□□ -0.68
TPCN1-201ENST00000335509 KRTAP24-1Q3LI83 254 aa10.81□□□□□ -0.68
TPCN1-201ENST00000335509 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
TPCN1-201ENST00000335509 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
TPCN1-201ENST00000335509 WDFY4Q6ZS81 3184 aa10.8□□□□□ -0.68
TPCN1-201ENST00000335509 TM2D3Q9BRN9 247 aa10.8□□□□□ -0.68
TPCN1-201ENST00000335509 TEX15Q9BXT5 2789 aa10.79□□□□□ -0.68
TPCN1-201ENST00000335509 NHLRC4P0CG21 123 aaPredicted RBP10.78□□□□□ -0.68
TPCN1-201ENST00000335509 Q6ZRP5 223 aa10.78□□□□□ -0.68
TPCN1-201ENST00000335509 SPACA4Q8TDM5 124 aa10.78□□□□□ -0.68
TPCN1-201ENST00000335509 LINC00588Q9Y4M8 146 aa10.77□□□□□ -0.68
TPCN1-201ENST00000335509 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
TPCN1-201ENST00000335509 CHD9Q3L8U1 2897 aa10.76□□□□□ -0.69
TPCN1-201ENST00000335509 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
TPCN1-201ENST00000335509 BCE1O60756 84 aa10.76□□□□□ -0.69
TPCN1-201ENST00000335509 MKI67P46013 3256 aaKnown RBP10.76□□□□□ -0.69
TPCN1-201ENST00000335509 HTTP42858 3142 aa10.75□□□□□ -0.69
TPCN1-201ENST00000335509 NBEAL1Q6ZS30 2694 aa10.75□□□□□ -0.69
TPCN1-201ENST00000335509 VPREB1P12018 145 aa10.75□□□□□ -0.69
TPCN1-201ENST00000335509 BRCA2P51587 3418 aa10.74□□□□□ -0.69
TPCN1-201ENST00000335509 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
TPCN1-201ENST00000335509 TRIOO75962 3097 aa10.74□□□□□ -0.69
TPCN1-201ENST00000335509 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
TPCN1-201ENST00000335509 A0A1B0GW54 56 aa10.72□□□□□ -0.69
TPCN1-201ENST00000335509 CSNK1G2-AS1Q8NCQ2 148 aa10.72□□□□□ -0.69
TPCN1-201ENST00000335509 LIMD2Q9BT23 127 aa10.72□□□□□ -0.69
TPCN1-201ENST00000335509 RPL37AP61513 92 aaKnown RBP10.72□□□□□ -0.69
TPCN1-201ENST00000335509 GVQW2A0A096LPI5 108 aaPredicted RBP10.71□□□□□ -0.69
TPCN1-201ENST00000335509 IGLV6-57P01721 117 aa10.71□□□□□ -0.69
TPCN1-201ENST00000335509 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
TPCN1-201ENST00000335509 RPS28P62857 69 aaKnown RBP10.7□□□□□ -0.7
TPCN1-201ENST00000335509 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
TPCN1-201ENST00000335509 C16orf90A8MZG2 172 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms