RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAM218AQ96MZ4 157 aa11.79□□□□□ -0.52
TRAPPC11-201ENST00000334690 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
TRAPPC11-201ENST00000334690 PRR15LQ9BU68 103 aa11.78□□□□□ -0.52
TRAPPC11-201ENST00000334690 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
TRAPPC11-201ENST00000334690 C22orf24Q9Y442 160 aa11.77□□□□□ -0.53
TRAPPC11-201ENST00000334690 ESRGQ1W209 222 aa11.77□□□□□ -0.53
TRAPPC11-201ENST00000334690 PCNTO95613 3336 aa11.76□□□□□ -0.53
TRAPPC11-201ENST00000334690 LITAFQ99732 161 aa11.76□□□□□ -0.53
TRAPPC11-201ENST00000334690 TRBV7-6A0A0J9YX20 115 aa11.75□□□□□ -0.53
TRAPPC11-201ENST00000334690 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
TRAPPC11-201ENST00000334690 A6NED7 52 aa11.75□□□□□ -0.53
TRAPPC11-201ENST00000334690 BCE1O60756 84 aa11.72□□□□□ -0.53
TRAPPC11-201ENST00000334690 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
TRAPPC11-201ENST00000334690 PRLHP81277 87 aa11.72□□□□□ -0.53
TRAPPC11-201ENST00000334690 A0A1B0GW54 56 aa11.71□□□□□ -0.53
TRAPPC11-201ENST00000334690 KIAA0087Q14695 138 aa11.71□□□□□ -0.54
TRAPPC11-201ENST00000334690 IGLV5-52A0A0A0MRZ9 124 aa11.7□□□□□ -0.54
TRAPPC11-201ENST00000334690 CRYGAP11844 174 aa11.7□□□□□ -0.54
TRAPPC11-201ENST00000334690 SMCR5Q8TEV8 140 aa11.7□□□□□ -0.54
TRAPPC11-201ENST00000334690 HCG22E2RYF7 251 aa11.69□□□□□ -0.54
TRAPPC11-201ENST00000334690 Q8NAQ8 132 aa11.69□□□□□ -0.54
TRAPPC11-201ENST00000334690 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
TRAPPC11-201ENST00000334690 LINC00167Q96N53 147 aa11.69□□□□□ -0.54
TRAPPC11-201ENST00000334690 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
TRAPPC11-201ENST00000334690 K7ERS5 55 aa11.68□□□□□ -0.54
TRAPPC11-201ENST00000334690 IGHV6-1A0A0B4J1U7 121 aa11.67□□□□□ -0.54
TRAPPC11-201ENST00000334690 MGAM2Q2M2H8 2515 aa11.67□□□□□ -0.54
TRAPPC11-201ENST00000334690 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC11-201ENST00000334690 LOC110117498A0A087WWA1 95 aa11.65□□□□□ -0.54
TRAPPC11-201ENST00000334690 H0Y9P7 68 aa11.65□□□□□ -0.55
TRAPPC11-201ENST00000334690 DEFB116Q30KQ4 102 aa11.65□□□□□ -0.55
TRAPPC11-201ENST00000334690 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC11-201ENST00000334690 Q6ZQT0 140 aa11.64□□□□□ -0.55
TRAPPC11-201ENST00000334690 BPTFQ12830 3046 aa11.64□□□□□ -0.55
TRAPPC11-201ENST00000334690 hDV103S1A0JD37 113 aa11.63□□□□□ -0.55
TRAPPC11-201ENST00000334690 C1orf134Q5TEV5 83 aa11.63□□□□□ -0.55
TRAPPC11-201ENST00000334690 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
TRAPPC11-201ENST00000334690 C1orf195Q5TG92 126 aa11.62□□□□□ -0.55
TRAPPC11-201ENST00000334690 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
TRAPPC11-201ENST00000334690 CENPEQ02224 2701 aa11.6□□□□□ -0.55
TRAPPC11-201ENST00000334690 A0A096LNT2 108 aa11.6□□□□□ -0.55
TRAPPC11-201ENST00000334690 Q6ZRX8 168 aa11.6□□□□□ -0.55
TRAPPC11-201ENST00000334690 Q8NBF4 154 aa11.59□□□□□ -0.55
TRAPPC11-201ENST00000334690 C5orf42Q9H799 3197 aa11.58□□□□□ -0.56
TRAPPC11-201ENST00000334690 PCOTHQ58A44 107 aa11.58□□□□□ -0.56
TRAPPC11-201ENST00000334690 RPS28P62857 69 aaKnown RBP11.57□□□□□ -0.56
TRAPPC11-201ENST00000334690 SMIM29Q86T20 159 aa11.57□□□□□ -0.56
TRAPPC11-201ENST00000334690 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
TRAPPC11-201ENST00000334690 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
TRAPPC11-201ENST00000334690 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
TRAPPC11-201ENST00000334690 EIF4EBP3O60516 100 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC11-201ENST00000334690 VPREB1P12018 145 aa11.54□□□□□ -0.56
TRAPPC11-201ENST00000334690 C1orf64Q8NEQ6 169 aa11.53□□□□□ -0.56
TRAPPC11-201ENST00000334690 MDFIQ99750 246 aa11.53□□□□□ -0.56
TRAPPC11-201ENST00000334690 HTTP42858 3142 aa11.53□□□□□ -0.56
TRAPPC11-201ENST00000334690 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.56
TRAPPC11-201ENST00000334690 DNAH10OSP0CZ25 163 aa11.51□□□□□ -0.57
TRAPPC11-201ENST00000334690 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
TRAPPC11-201ENST00000334690 ATRQ13535 2644 aa11.51□□□□□ -0.57
TRAPPC11-201ENST00000334690 MAST4O15021 2626 aa11.51□□□□□ -0.57
TRAPPC11-201ENST00000334690 PMAIP1Q13794 54 aa11.51□□□□□ -0.57
TRAPPC11-201ENST00000334690 C19orf73Q9NVV2 129 aa11.5□□□□□ -0.57
TRAPPC11-201ENST00000334690 GIG44P09565 113 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC11-201ENST00000334690 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
TRAPPC11-201ENST00000334690 PSPHP1O15172 72 aa11.5□□□□□ -0.57
TRAPPC11-201ENST00000334690 Q6ZRP5 223 aa11.5□□□□□ -0.57
TRAPPC11-201ENST00000334690 C16orf90A8MZG2 172 aa11.49□□□□□ -0.57
TRAPPC11-201ENST00000334690 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
TRAPPC11-201ENST00000334690 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
TRAPPC11-201ENST00000334690 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
TRAPPC11-201ENST00000334690 LIMD2Q9BT23 127 aa11.48□□□□□ -0.57
TRAPPC11-201ENST00000334690 LINC00612Q8N6U2 182 aa11.47□□□□□ -0.57
TRAPPC11-201ENST00000334690 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
TRAPPC11-201ENST00000334690 TRANK1O15050 2925 aa11.43□□□□□ -0.58
TRAPPC11-201ENST00000334690 H3BPC8 53 aa11.43□□□□□ -0.58
TRAPPC11-201ENST00000334690 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
TRAPPC11-201ENST00000334690 MOBPQ13875 183 aa11.43□□□□□ -0.58
TRAPPC11-201ENST00000334690 PHF5AQ7RTV0 110 aaKnown RBP11.43□□□□□ -0.58
TRAPPC11-201ENST00000334690 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
TRAPPC11-201ENST00000334690 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
TRAPPC11-201ENST00000334690 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
TRAPPC11-201ENST00000334690 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
TRAPPC11-201ENST00000334690 KCNQ1DNQ9H478 68 aa11.42□□□□□ -0.58
TRAPPC11-201ENST00000334690 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
TRAPPC11-201ENST00000334690 PRO0628Q9UI54 55 aa11.4□□□□□ -0.58
TRAPPC11-201ENST00000334690 CFAP46Q8IYW2 2715 aa11.4□□□□□ -0.59
TRAPPC11-201ENST00000334690 ZNF575Q86XF7 245 aa11.38□□□□□ -0.59
TRAPPC11-201ENST00000334690 A0A0C4DFX4 3053 aa11.38□□□□□ -0.59
TRAPPC11-201ENST00000334690 RETNLBQ9BQ08 111 aa11.38□□□□□ -0.59
TRAPPC11-201ENST00000334690 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
TRAPPC11-201ENST00000334690 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
TRAPPC11-201ENST00000334690 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
TRAPPC11-201ENST00000334690 ZNF292O60281 2723 aa11.34□□□□□ -0.59
TRAPPC11-201ENST00000334690 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
TRAPPC11-201ENST00000334690 CHTF8P0CG12 524 aa11.33□□□□□ -0.6
TRAPPC11-201ENST00000334690 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
TRAPPC11-201ENST00000334690 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
TRAPPC11-201ENST00000334690 CFAP54Q96N23 3096 aa11.32□□□□□ -0.6
TRAPPC11-201ENST00000334690 RTL8CO15255 209 aa11.31□□□□□ -0.6
TRAPPC11-201ENST00000334690 IGKV2D-30A0A075B6S6 120 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms