RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 COA5Q86WW8 74 aa6.8□□□□□ -1.32
COL4A6-201ENST00000334504 ABCA2Q9BZC7 2435 aa6.8□□□□□ -1.32
COL4A6-201ENST00000334504 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 TET2Q6N021 2002 aaPredicted RBP6.79□□□□□ -1.32
COL4A6-201ENST00000334504 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 DOPEY1Q5JWR5 2465 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 NAV3Q8IVL0 2385 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 FHL3Q13643 280 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 A0A1B0GW54 56 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 MOBPQ13875 183 aa6.79□□□□□ -1.32
COL4A6-201ENST00000334504 LINC00315P59091 139 aa6.78□□□□□ -1.32
COL4A6-201ENST00000334504 Q8NBF4 154 aa6.78□□□□□ -1.32
COL4A6-201ENST00000334504 KTN1-AS1Q86SY8 53 aa6.78□□□□□ -1.32
COL4A6-201ENST00000334504 IGLV5-45A0A087WSX0 123 aa6.77□□□□□ -1.33
COL4A6-201ENST00000334504 SRCAPQ6ZRS2 3230 aa6.77□□□□□ -1.33
COL4A6-201ENST00000334504 NAV2Q8IVL1 2488 aa6.77□□□□□ -1.33
COL4A6-201ENST00000334504 CDSNQ15517 529 aa6.77□□□□□ -1.33
COL4A6-201ENST00000334504 ERC2-IT1O76042 136 aa6.77□□□□□ -1.33
COL4A6-201ENST00000334504 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
COL4A6-201ENST00000334504 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
COL4A6-201ENST00000334504 LINC01600Q96MT4 127 aa6.76□□□□□ -1.33
COL4A6-201ENST00000334504 LCA10Q71F78 164 aa6.75□□□□□ -1.33
COL4A6-201ENST00000334504 ST20-AS1Q8NBB2 130 aa6.75□□□□□ -1.33
COL4A6-201ENST00000334504 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
COL4A6-201ENST00000334504 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 LINC00313P59037 77 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 AGRNO00468 2067 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 IGF2RP11717 2491 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 UQCR11O14957 56 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 K7EQZ3 153 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 Q6ZRX8 168 aa6.73□□□□□ -1.33
COL4A6-201ENST00000334504 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
COL4A6-201ENST00000334504 LITAFQ99732 161 aa6.72□□□□□ -1.33
COL4A6-201ENST00000334504 ADAMTS20P59510 1910 aa6.71□□□□□ -1.34
COL4A6-201ENST00000334504 KLKP1Q107X0 134 aa6.71□□□□□ -1.34
COL4A6-201ENST00000334504 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
COL4A6-201ENST00000334504 WIPF1O43516 503 aa6.7□□□□□ -1.34
COL4A6-201ENST00000334504 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
COL4A6-201ENST00000334504 PTPRSQ13332 1948 aa6.69□□□□□ -1.34
COL4A6-201ENST00000334504 PIEZO2Q9H5I5 2752 aa6.69□□□□□ -1.34
COL4A6-201ENST00000334504 A8MWP4 228 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 H7BZZ5 65 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 CPAMD8Q8IZJ3 1885 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 C16orf95Q9H693 158 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
COL4A6-201ENST00000334504 MUC22E2RYF6 1773 aaPredicted RBP6.67□□□□□ -1.34
COL4A6-201ENST00000334504 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
COL4A6-201ENST00000334504 APLNQ9ULZ1 77 aa6.67□□□□□ -1.34
COL4A6-201ENST00000334504 LRP4O75096 1905 aa6.67□□□□□ -1.34
COL4A6-201ENST00000334504 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
COL4A6-201ENST00000334504 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
COL4A6-201ENST00000334504 Q96NJ1 140 aa6.65□□□□□ -1.34
COL4A6-201ENST00000334504 JMJD1CQ15652 2540 aa6.64□□□□□ -1.35
COL4A6-201ENST00000334504 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
COL4A6-201ENST00000334504 A0A1W2PPR1 153 aa6.61□□□□□ -1.35
COL4A6-201ENST00000334504 Q6ZRP5 223 aa6.6□□□□□ -1.35
COL4A6-201ENST00000334504 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
COL4A6-201ENST00000334504 TYMSOSQ8TAI1 123 aa6.59□□□□□ -1.35
COL4A6-201ENST00000334504 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.36
COL4A6-201ENST00000334504 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
COL4A6-201ENST00000334504 ZNF462Q96JM2 2506 aa6.58□□□□□ -1.36
COL4A6-201ENST00000334504 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
COL4A6-201ENST00000334504 CHD8Q9HCK8 2581 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 DSCR10P59022 87 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 H3BS24 57 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
COL4A6-201ENST00000334504 LRRK2Q5S007 2527 aa6.56□□□□□ -1.36
COL4A6-201ENST00000334504 C9orf129Q5T035 196 aaKnown RBP6.56□□□□□ -1.36
COL4A6-201ENST00000334504 RTL8CO15255 209 aa6.55□□□□□ -1.36
COL4A6-201ENST00000334504 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
COL4A6-201ENST00000334504 C2CD3Q4AC94 2353 aa6.55□□□□□ -1.36
COL4A6-201ENST00000334504 MYO9AB2RTY4 2548 aa6.55□□□□□ -1.36
COL4A6-201ENST00000334504 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
COL4A6-201ENST00000334504 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
COL4A6-201ENST00000334504 H3BNG1 76 aa6.54□□□□□ -1.36
COL4A6-201ENST00000334504 KRTAP24-1Q3LI83 254 aa6.54□□□□□ -1.36
COL4A6-201ENST00000334504 A0A0G2JQZ4 141 aa6.53□□□□□ -1.36
COL4A6-201ENST00000334504 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
COL4A6-201ENST00000334504 Q1T7F1 81 aa6.52□□□□□ -1.37
COL4A6-201ENST00000334504 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
COL4A6-201ENST00000334504 ABCA12Q86UK0 2595 aa6.52□□□□□ -1.37
COL4A6-201ENST00000334504 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
COL4A6-201ENST00000334504 WWC2-AS2Q96NR7 200 aa6.51□□□□□ -1.37
COL4A6-201ENST00000334504 TLN1Q9Y490 2541 aaKnown RBP6.51□□□□□ -1.37
COL4A6-201ENST00000334504 FN1P02751 2386 aaKnown RBP6.51□□□□□ -1.37
COL4A6-201ENST00000334504 Q8N377 158 aa6.51□□□□□ -1.37
COL4A6-201ENST00000334504 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
COL4A6-201ENST00000334504 C10orf142B7Z368 130 aa6.5□□□□□ -1.37
COL4A6-201ENST00000334504 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
COL4A6-201ENST00000334504 A0A0D9SG42 100 aa6.49□□□□□ -1.37
COL4A6-201ENST00000334504 LINC00588Q9Y4M8 146 aa6.49□□□□□ -1.37
COL4A6-201ENST00000334504 PTPRBP23467 1997 aa6.49□□□□□ -1.37
COL4A6-201ENST00000334504 Q5XG85 94 aa6.49□□□□□ -1.37
COL4A6-201ENST00000334504 GOLGB1Q14789 3259 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms