RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 IGLV1-51P01701 117 aa13.29□□□□□ -0.28
NPLOC4-201ENST00000331134 PSPHP1O15172 72 aa13.29□□□□□ -0.28
NPLOC4-201ENST00000331134 C1orf137Q5JT78 98 aa13.28□□□□□ -0.28
NPLOC4-201ENST00000331134 BRI3O95415 125 aa13.28□□□□□ -0.28
NPLOC4-201ENST00000331134 FRYLO94915 3013 aa13.27□□□□□ -0.28
NPLOC4-201ENST00000331134 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.28
NPLOC4-201ENST00000331134 TMEM254Q8TBM7 123 aa13.27□□□□□ -0.28
NPLOC4-201ENST00000331134 RETNQ9HD89 108 aa13.27□□□□□ -0.29
NPLOC4-201ENST00000331134 MUC7Q8TAX7 377 aa13.27□□□□□ -0.29
NPLOC4-201ENST00000331134 DHRS4-AS1Q9P1J3 65 aa13.27□□□□□ -0.29
NPLOC4-201ENST00000331134 C4orf26Q17RF5 130 aa13.25□□□□□ -0.29
NPLOC4-201ENST00000331134 PRYO14603 147 aa13.25□□□□□ -0.29
NPLOC4-201ENST00000331134 COL4A2P08572 1712 aa13.25□□□□□ -0.29
NPLOC4-201ENST00000331134 IGHV4-30-4P0DP06 118 aa13.25□□□□□ -0.29
NPLOC4-201ENST00000331134 DSPP15924 2871 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-201ENST00000331134 EGFEM1PQ0D2K5 195 aa13.23□□□□□ -0.29
NPLOC4-201ENST00000331134 CRYGAP11844 174 aa13.23□□□□□ -0.29
NPLOC4-201ENST00000331134 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
NPLOC4-201ENST00000331134 LITAFQ99732 161 aa13.22□□□□□ -0.29
NPLOC4-201ENST00000331134 NHLRC4P0CG21 123 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-201ENST00000331134 LY6G6DO95868 133 aa13.2□□□□□ -0.3
NPLOC4-201ENST00000331134 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
NPLOC4-201ENST00000331134 A0A1B0GUV1 79 aa13.19□□□□□ -0.3
NPLOC4-201ENST00000331134 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
NPLOC4-201ENST00000331134 SMCR5Q8TEV8 140 aa13.19□□□□□ -0.3
NPLOC4-201ENST00000331134 PMAIP1Q13794 54 aa13.19□□□□□ -0.3
NPLOC4-201ENST00000331134 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
NPLOC4-201ENST00000331134 IGLV9-49A0A0B4J1Y8 123 aa13.18□□□□□ -0.3
NPLOC4-201ENST00000331134 Q6ZTC4 211 aa13.18□□□□□ -0.3
NPLOC4-201ENST00000331134 A0A087WSZ3 146 aa13.16□□□□□ -0.3
NPLOC4-201ENST00000331134 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
NPLOC4-201ENST00000331134 Q6ZRU5 148 aa13.15□□□□□ -0.3
NPLOC4-201ENST00000331134 C10orf25Q5T742 122 aa13.15□□□□□ -0.3
NPLOC4-201ENST00000331134 SPATA3Q8NHX4 192 aa13.14□□□□□ -0.31
NPLOC4-201ENST00000331134 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-201ENST00000331134 C4orf48Q5BLP8 95 aa13.13□□□□□ -0.31
NPLOC4-201ENST00000331134 M0R2N4 97 aa13.13□□□□□ -0.31
NPLOC4-201ENST00000331134 PRR15LQ9BU68 103 aa13.13□□□□□ -0.31
NPLOC4-201ENST00000331134 PCOTHQ58A44 107 aa13.12□□□□□ -0.31
NPLOC4-201ENST00000331134 CASC2Q6XLA1 102 aa13.12□□□□□ -0.31
NPLOC4-201ENST00000331134 C14orf177Q52M58 125 aa13.11□□□□□ -0.31
NPLOC4-201ENST00000331134 TRAV10A0A0B4J240 114 aa13.1□□□□□ -0.31
NPLOC4-201ENST00000331134 ESRGQ1W209 222 aa13.08□□□□□ -0.32
NPLOC4-201ENST00000331134 ITPR3Q14573 2671 aa13.06□□□□□ -0.32
NPLOC4-201ENST00000331134 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
NPLOC4-201ENST00000331134 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
NPLOC4-201ENST00000331134 TM2D3Q9BRN9 247 aa13.06□□□□□ -0.32
NPLOC4-201ENST00000331134 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
NPLOC4-201ENST00000331134 SEC61GP60059 68 aa13.05□□□□□ -0.32
NPLOC4-201ENST00000331134 PRLHP81277 87 aa13.04□□□□□ -0.32
NPLOC4-201ENST00000331134 KIAA0087Q14695 138 aa13.04□□□□□ -0.32
NPLOC4-201ENST00000331134 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
NPLOC4-201ENST00000331134 CXCL6P80162 114 aa13.03□□□□□ -0.32
NPLOC4-201ENST00000331134 PRO0628Q9UI54 55 aa13.03□□□□□ -0.32
NPLOC4-201ENST00000331134 RPS28P62857 69 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-201ENST00000331134 REG3GQ6UW15 175 aa13.01□□□□□ -0.33
NPLOC4-201ENST00000331134 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
NPLOC4-201ENST00000331134 C6orf48Q9UBA6 75 aa13.01□□□□□ -0.33
NPLOC4-201ENST00000331134 WDFY3Q8IZQ1 3526 aa13.01□□□□□ -0.33
NPLOC4-201ENST00000331134 COL6A3P12111 3177 aa13□□□□□ -0.33
NPLOC4-201ENST00000331134 Q6ZQT0 140 aa13□□□□□ -0.33
NPLOC4-201ENST00000331134 NOTCH1P46531 2555 aa12.99□□□□□ -0.33
NPLOC4-201ENST00000331134 H0Y9P7 68 aa12.98□□□□□ -0.33
NPLOC4-201ENST00000331134 Q9BRP9 147 aa12.98□□□□□ -0.33
NPLOC4-201ENST00000331134 IGHV6-1A0A0B4J1U7 121 aa12.97□□□□□ -0.33
NPLOC4-201ENST00000331134 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
NPLOC4-201ENST00000331134 HCG22E2RYF7 251 aa12.95□□□□□ -0.34
NPLOC4-201ENST00000331134 GCN1Q92616 2671 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-201ENST00000331134 C9orf129Q5T035 196 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-201ENST00000331134 KALRNO60229 2985 aa12.93□□□□□ -0.34
NPLOC4-201ENST00000331134 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
NPLOC4-201ENST00000331134 RETNLBQ9BQ08 111 aa12.92□□□□□ -0.34
NPLOC4-201ENST00000331134 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
NPLOC4-201ENST00000331134 ZNF575Q86XF7 245 aa12.91□□□□□ -0.34
NPLOC4-201ENST00000331134 UNC79Q9P2D8 2635 aa12.9□□□□□ -0.34
NPLOC4-201ENST00000331134 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
NPLOC4-201ENST00000331134 X6R8D5 127 aa12.88□□□□□ -0.35
NPLOC4-201ENST00000331134 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
NPLOC4-201ENST00000331134 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
NPLOC4-201ENST00000331134 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
NPLOC4-201ENST00000331134 NBEAL2Q6ZNJ1 2754 aa12.87□□□□□ -0.35
NPLOC4-201ENST00000331134 C1orf64Q8NEQ6 169 aa12.86□□□□□ -0.35
NPLOC4-201ENST00000331134 CIRBP-AS1Q8TBR5 109 aa12.86□□□□□ -0.35
NPLOC4-201ENST00000331134 C16orf95Q9H693 158 aa12.86□□□□□ -0.35
NPLOC4-201ENST00000331134 ST20-AS1Q8NBB2 130 aa12.85□□□□□ -0.35
NPLOC4-201ENST00000331134 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-201ENST00000331134 ELOF1P60002 83 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-201ENST00000331134 LOC110117498A0A087WWA1 95 aa12.82□□□□□ -0.36
NPLOC4-201ENST00000331134 ZNF292O60281 2723 aa12.82□□□□□ -0.36
NPLOC4-201ENST00000331134 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
NPLOC4-201ENST00000331134 DMDP11532 3685 aa12.81□□□□□ -0.36
NPLOC4-201ENST00000331134 CFAP47Q6ZTR5 3102 aa12.81□□□□□ -0.36
NPLOC4-201ENST00000331134 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
NPLOC4-201ENST00000331134 LINC01556Q5JQF7 62 aa12.8□□□□□ -0.36
NPLOC4-201ENST00000331134 SPINK1P00995 79 aa12.79□□□□□ -0.36
NPLOC4-201ENST00000331134 BCE1O60756 84 aa12.79□□□□□ -0.36
NPLOC4-201ENST00000331134 hDV103S1A0JD37 113 aa12.78□□□□□ -0.36
NPLOC4-201ENST00000331134 ZNF706Q9Y5V0 76 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-201ENST00000331134 HELZ2Q9BYK8 2649 aaKnown RBP12.77□□□□□ -0.36
NPLOC4-201ENST00000331134 Q8NBF4 154 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms